| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is fecR [H]
Identifier: 77457151
GI number: 77457151
Start: 1075592
End: 1076509
Strand: Reverse
Name: fecR [H]
Synonym: Pfl01_0924
Alternate gene names: 77457151
Gene position: 1076509-1075592 (Counterclockwise)
Preceding gene: 77457152
Following gene: 77457150
Centisome position: 16.72
GC content: 62.53
Gene sequence:
>918_bases ATGGATTTTTCCGCGCAGGTCGCCGAACAGGCGGTGCACTGGTTGCTGGAAATGCAGCAGGGCCCCTTGAACCCGCGTCA GCAACAAGCCTGGCAGCAATGGATCGACGCCCACAGCGAACACCGCCGCGCTTGGGAGCACATTCAGCGAGTCAATTCGC GGTTGCGCGGGTTGTCGTCGCCACTGGCCCACGCCGCGTTGAATGCGCCGAAGTCCGGCAGCCGTCGTCAGGCACTCAAA TTTTTGCTGATTCTCGGCGCTGGCTCGGCGGTGACCTGGGGCATGCGCGAGCACAATCCTCTGCCATCGCTGCTGGCCGA TTACCGCAGCCCGATCGGTCAGCGACGCAAGATCTCGCTCGGCGCCGGCGGCCAATTGCAGCTCAACACCGCCAGCGCGG CGGATGTCCGGGGCGATGGCCTGATCCGCCTGCTCGAAGGCGAAATGCTGCTGACCGCCACTCAATCCTTCGAAGTGCAA ACCGCCCAAGGCCTGTTGAAAACCCAGGGTGCGCGGATCAACGTGCGGCAGTTTGCCGACCGTACACAGATCGCACTGTT TGAAGGTCGGGTCGAATTGAACGCGCAAGGTCGCGCGCCGATGCTGCTGCCGGTCGCCCGACAACTGAGTTTCAGCACCA CCGGCGTCAGCCCGGCAAAACCGCTGGACGCCAACAGCGGCGCTTGGGCCGACGGCATGCTGGTGGCCGCGCACATGCGT CTTGGCGACTTTCTCGACGAACTCGGCCGCTACCGTCGCGGGCAGCTCCATTGCGATGCGAAAGTCGCTGATTTACTGAT CTCCGGGACTTATCCACTGGACGACAGCGAGCGGATTCTCGACCTGCTGGAAATCAGCCTGCCGGTGAAAGTGAAGCGTT TTACTCGCTATTGGGTGACGGTCGAAGCCAAGGTTTGA
Upstream 100 bases:
>100_bases ATCCGCAGATCGCCACCGAACTGGGCATTTCCGTCGCCACGGTCAAACGTCATCTGAATAAAGCGGCGATGCGCTGCTAC TTCGCCCTGTGAACCCGCCG
Downstream 100 bases:
>100_bases TCAAACGCAAAAATAAATGAGCCGTTTTTCAGATCTGGCGTGACAGAGAAGGAAAGCCCCCTTGATTCAACCTTCTCAGG ACTGTCCTTCATGCAACCCA
Product: putative FecR
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 305; Mature: 305
Protein sequence:
>305_residues MDFSAQVAEQAVHWLLEMQQGPLNPRQQQAWQQWIDAHSEHRRAWEHIQRVNSRLRGLSSPLAHAALNAPKSGSRRQALK FLLILGAGSAVTWGMREHNPLPSLLADYRSPIGQRRKISLGAGGQLQLNTASAADVRGDGLIRLLEGEMLLTATQSFEVQ TAQGLLKTQGARINVRQFADRTQIALFEGRVELNAQGRAPMLLPVARQLSFSTTGVSPAKPLDANSGAWADGMLVAAHMR LGDFLDELGRYRRGQLHCDAKVADLLISGTYPLDDSERILDLLEISLPVKVKRFTRYWVTVEAKV
Sequences:
>Translated_305_residues MDFSAQVAEQAVHWLLEMQQGPLNPRQQQAWQQWIDAHSEHRRAWEHIQRVNSRLRGLSSPLAHAALNAPKSGSRRQALK FLLILGAGSAVTWGMREHNPLPSLLADYRSPIGQRRKISLGAGGQLQLNTASAADVRGDGLIRLLEGEMLLTATQSFEVQ TAQGLLKTQGARINVRQFADRTQIALFEGRVELNAQGRAPMLLPVARQLSFSTTGVSPAKPLDANSGAWADGMLVAAHMR LGDFLDELGRYRRGQLHCDAKVADLLISGTYPLDDSERILDLLEISLPVKVKRFTRYWVTVEAKV >Mature_305_residues MDFSAQVAEQAVHWLLEMQQGPLNPRQQQAWQQWIDAHSEHRRAWEHIQRVNSRLRGLSSPLAHAALNAPKSGSRRQALK FLLILGAGSAVTWGMREHNPLPSLLADYRSPIGQRRKISLGAGGQLQLNTASAADVRGDGLIRLLEGEMLLTATQSFEVQ TAQGLLKTQGARINVRQFADRTQIALFEGRVELNAQGRAPMLLPVARQLSFSTTGVSPAKPLDANSGAWADGMLVAAHMR LGDFLDELGRYRRGQLHCDAKVADLLISGTYPLDDSERILDLLEISLPVKVKRFTRYWVTVEAKV
Specific function: Regulation of iron dicitrate transport. In the absence of citrate fecR inactivates fecI. FecR is probably a sensor that recognizes iron dicitrate in the periplasm [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790745, Length=313, Percent_Identity=33.2268370607029, Blast_Score=151, Evalue=5e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006860 - InterPro: IPR012373 [H]
Pfam domain/function: PF04773 FecR [H]
EC number: NA
Molecular weight: Translated: 33792; Mature: 33792
Theoretical pI: Translated: 10.34; Mature: 10.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDFSAQVAEQAVHWLLEMQQGPLNPRQQQAWQQWIDAHSEHRRAWEHIQRVNSRLRGLSS CCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PLAHAALNAPKSGSRRQALKFLLILGAGSAVTWGMREHNPLPSLLADYRSPIGQRRKISL HHHHHHHCCCCCCCHHHHHHHHHEEECCCEEECCCCCCCCCHHHHHHHHCCCCCCEEEEE GAGGQLQLNTASAADVRGDGLIRLLEGEMLLTATQSFEVQTAQGLLKTQGARINVRQFAD CCCCEEEEECCCCCCCCCCCEEEEECCCEEEEECCCCCHHHHHHHHHHCCCEEEHHHHCC RTQIALFEGRVELNAQGRAPMLLPVARQLSFSTTGVSPAKPLDANSGAWADGMLVAAHMR CCEEEEEECEEEECCCCCCCEEHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH LGDFLDELGRYRRGQLHCDAKVADLLISGTYPLDDSERILDLLEISLPVKVKRFTRYWVT HHHHHHHHHHHHCCCEEECHHHHHHEEECCCCCCCHHHHHHHHHHCCCCEEEEEEEEEEE VEAKV EEECC >Mature Secondary Structure MDFSAQVAEQAVHWLLEMQQGPLNPRQQQAWQQWIDAHSEHRRAWEHIQRVNSRLRGLSS CCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PLAHAALNAPKSGSRRQALKFLLILGAGSAVTWGMREHNPLPSLLADYRSPIGQRRKISL HHHHHHHCCCCCCCHHHHHHHHHEEECCCEEECCCCCCCCCHHHHHHHHCCCCCCEEEEE GAGGQLQLNTASAADVRGDGLIRLLEGEMLLTATQSFEVQTAQGLLKTQGARINVRQFAD CCCCEEEEECCCCCCCCCCCEEEEECCCEEEEECCCCCHHHHHHHHHHCCCEEEHHHHCC RTQIALFEGRVELNAQGRAPMLLPVARQLSFSTTGVSPAKPLDANSGAWADGMLVAAHMR CCEEEEEECEEEECCCCCCCEEHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH LGDFLDELGRYRRGQLHCDAKVADLLISGTYPLDDSERILDLLEISLPVKVKRFTRYWVT HHHHHHHHHHHHCCCEEECHHHHHHEEECCCCCCCHHHHHHHHHHCCCCEEEEEEEEEEE VEAKV EEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2254251; 7610040; 9278503 [H]