| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is fecA [H]
Identifier: 77457150
GI number: 77457150
Start: 1073168
End: 1075501
Strand: Reverse
Name: fecA [H]
Synonym: Pfl01_0923
Alternate gene names: 77457150
Gene position: 1075501-1073168 (Counterclockwise)
Preceding gene: 77457151
Following gene: 77457147
Centisome position: 16.7
GC content: 62.13
Gene sequence:
>2334_bases ATGCAACCCACCCGCCTCACGCCGCTGGCCCGAACCCTGCGTAACCTCGTCCTCGGCGCCAGCCTGAGCTTCAGCGCCCT GCCCCTTGCGCAGGCTGCCGACACCAAGGCTTATCACATCGCCCCGTCGTCGTTGGAGAACGCCCTCAACCAGTTCGGCC GTGAAGCCGGTGTGCTGATTTCGTTCGGCTCGCAAGTCACCAGCGGCGTGCAGAGCCGTGGCCTAGAAGGCAGCTACACA GCCGAGCAAGGTCTGAACGCGCTGCTCGAAGGCACTGGTCTGCAAGCCCGCGCCGAAGGTGGCAATGCCTTCAGCCTGCA ACCGTCGAACGACGGCGCACTGGAGCTGGACACCTCGAAAGTGGTCGGCGACTGGTTGGGTGAAGCGGCGCAGGTCAACG TCTTCGAACATCCCGGTGCCCGTGACGTGATCCGCCGCGAAGAATTCGAACGCCAGGGCGCGACTCAGGCCCGCGATGTG CTCAACCGCATTCCCGGGGTCAACGCGCCGGAAAACAACGGCACCGGCAGCCACGACATGGCGCTGAACTTCGGTATTCG CGGTCTCAACCCGCGCCTGGCCGCACGTTCGACGGTGTTGATGGACGGCATTCCGGTGCCGTTCGCGCCTTACGGTCAGC CGCAGTTGTCGTTCGCGCCGATCAGCATGGGCAACATGGATGCGGTGGACGTGGTGCGCGGCGGCGGCGCCGTGCGTTAC GGCCCGCAGAACGTCGGCGGCGTGGTCAACTTTGTGACCCGGGCGATTCCGGACGAGCCGACCGTCAAGGGCGGCTTCCA GACCGAAACCAGCCCATCGTCCAGCCATGACGGCTTCAAGACCAGCGCCAACCTGCTGGCCGGCGGCACCAATGCCAACG GCCTGGGCGGCGCTCTGCTGTACTCCGGCACTCGAGGCGGCGACTGGCGCGAACACAGCGACACGGAAATCGACGACCTG ATCCTCAAGGGCAAATACCAGCTCGACGAAGCCAACAGCTTCAACGCCATGGCCCAGTATTACGAAGGCAAGGCCGACAT GCCGGGCGGCCTGAACGTCGCCGATTACGATGCCGACCCGTATCAGTCGACCCGGCCGAAAGACCAGTTCTGGGGCCGTC GCACGATGTTCAATGTCGGCTACCGCTATCAGGAAGACCGCCGCGAATTCACCGCCAATACTTTCTTCACCAAGACCCTG CGCAGCGGTTATCTGGACCAGGGCACCTTCCTCTCCCTGTCGCCGCGCGAGTATTGGGTTCGCGGTCTGGAAACCCGTTT CGCTCAAGGCTTCGACCTCGGCGCCACCAGCCATGAAGTCGGCGTCGGCTATCGCTATATCAACGAGGCCGGCCACGAAC TGCGCTATCGCACGCCGATCAGCAGCAATGAGTACCCGACCACCAATAGCCGCAATGACCGCGACACGCGCGGCGGCACC GAAGCCAATGCGTTTTTCGTCGATGACCGGATCGACATCGGCAAGTGGACGATCACCCCGGGTGTGCGCTACGAGATGAT CGAATCGCAACAGACCAACAACCTGACCAACGTCAAATACAAGGGTGACTACAACACCGCGCTGCCGGCGCTGAACGTGC TGTATCACCTGTCCGACAGCTGGAACCTGTACGCCAACACCGAAGGTTCGTTCGGTAGCGTGCAATACAGCCAGATGCCC AACCGCGTCAGCAGCGGCGAAGTGAAACCGGAGAAGGCCCGCACCTGGGAACTCGGCACCCGTTACGACAACGGTGCGCT GCGAGCGGAGATCGGCGCATTCCTGATCAACTTCGACAACCAGTACGAAAGCAACCAGACCAATGATTCGGTAATCGCCC GTGGCGAAACCCGGCATCAGGGCATCGAGACCAGCATCAATTATGCTCTCGACGACTTGAGCCCGGCGCTGGCCGGCTTC GATGTTTACGCCACTTACGCCTATGTGAACGCGACCATCCGCGAAGACGGGCCGAACAAGGGCAATCGTGTGCCGTTCTC GTCGAAACACAAAGGCACGATCGGCGTCGGTTACACCGAAGGGCCATGGAAACTCAACCTGGACAGCAGCTTCCAGAGCG ACCAGTTCGCCGACAACGCCAACACCTCGAAAGAAAGCGCCGACGGCAGCACCGGCAAGATCCCCGGCTACATGCTGTTC AGCAGCCGTGCCGGTTATGACTTCGGCCCGCAGCTGTCGGACCTGAACGTGGCGGTGGGGGTGAAGAACATCTTCAACAC GCAATACTTCACCCGCTCGTTCGATGACAACAACAAGGGCAAGTATGTCGGCGAGCCGCGCACGGTATACGTGCAGACCT CCGTGGCTTTCTGA
Upstream 100 bases:
>100_bases CAAGGTTTGATCAAACGCAAAAATAAATGAGCCGTTTTTCAGATCTGGCGTGACAGAGAAGGAAAGCCCCCTTGATTCAA CCTTCTCAGGACTGTCCTTC
Downstream 100 bases:
>100_bases TCCTGTTGAAAACAGAAAGGGCCTGCAATTGCAGGCCCTTTCTCATTGGGTGGCTTGGAAAATCAGCGCATCAACTGTTG ATCGCTGCCTGTTCGTTCTC
Product: TonB-dependent siderophore receptor
Products: NA
Alternate protein names: Iron(III) dicitrate transport protein fecA [H]
Number of amino acids: Translated: 777; Mature: 777
Protein sequence:
>777_residues MQPTRLTPLARTLRNLVLGASLSFSALPLAQAADTKAYHIAPSSLENALNQFGREAGVLISFGSQVTSGVQSRGLEGSYT AEQGLNALLEGTGLQARAEGGNAFSLQPSNDGALELDTSKVVGDWLGEAAQVNVFEHPGARDVIRREEFERQGATQARDV LNRIPGVNAPENNGTGSHDMALNFGIRGLNPRLAARSTVLMDGIPVPFAPYGQPQLSFAPISMGNMDAVDVVRGGGAVRY GPQNVGGVVNFVTRAIPDEPTVKGGFQTETSPSSSHDGFKTSANLLAGGTNANGLGGALLYSGTRGGDWREHSDTEIDDL ILKGKYQLDEANSFNAMAQYYEGKADMPGGLNVADYDADPYQSTRPKDQFWGRRTMFNVGYRYQEDRREFTANTFFTKTL RSGYLDQGTFLSLSPREYWVRGLETRFAQGFDLGATSHEVGVGYRYINEAGHELRYRTPISSNEYPTTNSRNDRDTRGGT EANAFFVDDRIDIGKWTITPGVRYEMIESQQTNNLTNVKYKGDYNTALPALNVLYHLSDSWNLYANTEGSFGSVQYSQMP NRVSSGEVKPEKARTWELGTRYDNGALRAEIGAFLINFDNQYESNQTNDSVIARGETRHQGIETSINYALDDLSPALAGF DVYATYAYVNATIREDGPNKGNRVPFSSKHKGTIGVGYTEGPWKLNLDSSFQSDQFADNANTSKESADGSTGKIPGYMLF SSRAGYDFGPQLSDLNVAVGVKNIFNTQYFTRSFDDNNKGKYVGEPRTVYVQTSVAF
Sequences:
>Translated_777_residues MQPTRLTPLARTLRNLVLGASLSFSALPLAQAADTKAYHIAPSSLENALNQFGREAGVLISFGSQVTSGVQSRGLEGSYT AEQGLNALLEGTGLQARAEGGNAFSLQPSNDGALELDTSKVVGDWLGEAAQVNVFEHPGARDVIRREEFERQGATQARDV LNRIPGVNAPENNGTGSHDMALNFGIRGLNPRLAARSTVLMDGIPVPFAPYGQPQLSFAPISMGNMDAVDVVRGGGAVRY GPQNVGGVVNFVTRAIPDEPTVKGGFQTETSPSSSHDGFKTSANLLAGGTNANGLGGALLYSGTRGGDWREHSDTEIDDL ILKGKYQLDEANSFNAMAQYYEGKADMPGGLNVADYDADPYQSTRPKDQFWGRRTMFNVGYRYQEDRREFTANTFFTKTL RSGYLDQGTFLSLSPREYWVRGLETRFAQGFDLGATSHEVGVGYRYINEAGHELRYRTPISSNEYPTTNSRNDRDTRGGT EANAFFVDDRIDIGKWTITPGVRYEMIESQQTNNLTNVKYKGDYNTALPALNVLYHLSDSWNLYANTEGSFGSVQYSQMP NRVSSGEVKPEKARTWELGTRYDNGALRAEIGAFLINFDNQYESNQTNDSVIARGETRHQGIETSINYALDDLSPALAGF DVYATYAYVNATIREDGPNKGNRVPFSSKHKGTIGVGYTEGPWKLNLDSSFQSDQFADNANTSKESADGSTGKIPGYMLF SSRAGYDFGPQLSDLNVAVGVKNIFNTQYFTRSFDDNNKGKYVGEPRTVYVQTSVAF >Mature_777_residues MQPTRLTPLARTLRNLVLGASLSFSALPLAQAADTKAYHIAPSSLENALNQFGREAGVLISFGSQVTSGVQSRGLEGSYT AEQGLNALLEGTGLQARAEGGNAFSLQPSNDGALELDTSKVVGDWLGEAAQVNVFEHPGARDVIRREEFERQGATQARDV LNRIPGVNAPENNGTGSHDMALNFGIRGLNPRLAARSTVLMDGIPVPFAPYGQPQLSFAPISMGNMDAVDVVRGGGAVRY GPQNVGGVVNFVTRAIPDEPTVKGGFQTETSPSSSHDGFKTSANLLAGGTNANGLGGALLYSGTRGGDWREHSDTEIDDL ILKGKYQLDEANSFNAMAQYYEGKADMPGGLNVADYDADPYQSTRPKDQFWGRRTMFNVGYRYQEDRREFTANTFFTKTL RSGYLDQGTFLSLSPREYWVRGLETRFAQGFDLGATSHEVGVGYRYINEAGHELRYRTPISSNEYPTTNSRNDRDTRGGT EANAFFVDDRIDIGKWTITPGVRYEMIESQQTNNLTNVKYKGDYNTALPALNVLYHLSDSWNLYANTEGSFGSVQYSQMP NRVSSGEVKPEKARTWELGTRYDNGALRAEIGAFLINFDNQYESNQTNDSVIARGETRHQGIETSINYALDDLSPALAGF DVYATYAYVNATIREDGPNKGNRVPFSSKHKGTIGVGYTEGPWKLNLDSSFQSDQFADNANTSKESADGSTGKIPGYMLF SSRAGYDFGPQLSDLNVAVGVKNIFNTQYFTRSFDDNNKGKYVGEPRTVYVQTSVAF
Specific function: FecA is the outer membrane receptor protein in the Fe(3+) dicitrate transport system [H]
COG id: COG4772
COG function: function code P; Outer membrane receptor for Fe3+-dicitrate
Gene ontology:
Cell location: Cell outer membrane [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
Organism=Escherichia coli, GI1790743, Length=783, Percent_Identity=62.8352490421456, Blast_Score=1000, Evalue=0.0, Organism=Escherichia coli, GI1787723, Length=689, Percent_Identity=23.9477503628447, Blast_Score=100, Evalue=3e-22, Organism=Escherichia coli, GI1790405, Length=134, Percent_Identity=35.0746268656716, Blast_Score=66, Evalue=7e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR011662 - InterPro: IPR000531 - InterPro: IPR010916 - InterPro: IPR010917 - InterPro: IPR010105 [H]
Pfam domain/function: PF07715 Plug; PF07660 STN; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 84905; Mature: 84905
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: PS01156 TONB_DEPENDENT_REC_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQPTRLTPLARTLRNLVLGASLSFSALPLAQAADTKAYHIAPSSLENALNQFGREAGVLI CCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHCCCCCEEEECHHHHHHHHHHHCCCCCEEE SFGSQVTSGVQSRGLEGSYTAEQGLNALLEGTGLQARAEGGNAFSLQPSNDGALELDTSK EECHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEEECCCCCEEEECCCCCCCEEEEHHH VVGDWLGEAAQVNVFEHPGARDVIRREEFERQGATQARDVLNRIPGVNAPENNGTGSHDM HHHHHCCCCEEEEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCE ALNFGIRGLNPRLAARSTVLMDGIPVPFAPYGQPQLSFAPISMGNMDAVDVVRGGGAVRY EEEECCCCCCCCHHHCCEEEECCCCCCCCCCCCCCCEEEECCCCCCCHHHEEECCCEEEE GPQNVGGVVNFVTRAIPDEPTVKGGFQTETSPSSSHDGFKTSANLLAGGTNANGLGGALL CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCEEE YSGTRGGDWREHSDTEIDDLILKGKYQLDEANSFNAMAQYYEGKADMPGGLNVADYDADP ECCCCCCCCCCCCCCCHHHEEECCCEECCCCCCHHHHHHHHCCCCCCCCCCEEECCCCCC YQSTRPKDQFWGRRTMFNVGYRYQEDRREFTANTFFTKTLRSGYLDQGTFLSLSPREYWV CCCCCCHHHHCCCCEEEECCCEECHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCHHHHH RGLETRFAQGFDLGATSHEVGVGYRYINEAGHELRYRTPISSNEYPTTNSRNDRDTRGGT HHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCC EANAFFVDDRIDIGKWTITPGVRYEMIESQQTNNLTNVKYKGDYNTALPALNVLYHLSDS CCEEEEEECCCCCCEEEECCCCEEEEHHCCCCCCCCEEEECCCCCHHHHHHHHHEEECCC WNLYANTEGSFGSVQYSQMPNRVSSGEVKPEKARTWELGTRYDNGALRAEIGAFLINFDN CEEEEECCCCCCCEEHHHCCCCCCCCCCCCCCCCEEECCCCCCCCCCEEEEEEEEEECCC QYESNQTNDSVIARGETRHQGIETSINYALDDLSPALAGFDVYATYAYVNATIREDGPNK CCCCCCCCCCEEECCCHHHCCCCHHHHHHHHHHHHHHHCHHHEEEEEEEEEEEECCCCCC GNRVPFSSKHKGTIGVGYTEGPWKLNLDSSFQSDQFADNANTSKESADGSTGKIPGYMLF CCCCCCCCCCCCEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE SSRAGYDFGPQLSDLNVAVGVKNIFNTQYFTRSFDDNNKGKYVGEPRTVYVQTSVAF ECCCCCCCCCCCCCCEEEEEHHHHHCCHHEEECCCCCCCCCCCCCCEEEEEEEEECC >Mature Secondary Structure MQPTRLTPLARTLRNLVLGASLSFSALPLAQAADTKAYHIAPSSLENALNQFGREAGVLI CCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHCCCCCEEEECHHHHHHHHHHHCCCCCEEE SFGSQVTSGVQSRGLEGSYTAEQGLNALLEGTGLQARAEGGNAFSLQPSNDGALELDTSK EECHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEEECCCCCEEEECCCCCCCEEEEHHH VVGDWLGEAAQVNVFEHPGARDVIRREEFERQGATQARDVLNRIPGVNAPENNGTGSHDM HHHHHCCCCEEEEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCE ALNFGIRGLNPRLAARSTVLMDGIPVPFAPYGQPQLSFAPISMGNMDAVDVVRGGGAVRY EEEECCCCCCCCHHHCCEEEECCCCCCCCCCCCCCCEEEECCCCCCCHHHEEECCCEEEE GPQNVGGVVNFVTRAIPDEPTVKGGFQTETSPSSSHDGFKTSANLLAGGTNANGLGGALL CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCEEE YSGTRGGDWREHSDTEIDDLILKGKYQLDEANSFNAMAQYYEGKADMPGGLNVADYDADP ECCCCCCCCCCCCCCCHHHEEECCCEECCCCCCHHHHHHHHCCCCCCCCCCEEECCCCCC YQSTRPKDQFWGRRTMFNVGYRYQEDRREFTANTFFTKTLRSGYLDQGTFLSLSPREYWV CCCCCCHHHHCCCCEEEECCCEECHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCHHHHH RGLETRFAQGFDLGATSHEVGVGYRYINEAGHELRYRTPISSNEYPTTNSRNDRDTRGGT HHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCC EANAFFVDDRIDIGKWTITPGVRYEMIESQQTNNLTNVKYKGDYNTALPALNVLYHLSDS CCEEEEEECCCCCCEEEECCCCEEEEHHCCCCCCCCEEEECCCCCHHHHHHHHHEEECCC WNLYANTEGSFGSVQYSQMPNRVSSGEVKPEKARTWELGTRYDNGALRAEIGAFLINFDN CEEEEECCCCCCCEEHHHCCCCCCCCCCCCCCCCEEECCCCCCCCCCEEEEEEEEEECCC QYESNQTNDSVIARGETRHQGIETSINYALDDLSPALAGFDVYATYAYVNATIREDGPNK CCCCCCCCCCEEECCCHHHCCCCHHHHHHHHHHHHHHHCHHHEEEEEEEEEEEECCCCCC GNRVPFSSKHKGTIGVGYTEGPWKLNLDSSFQSDQFADNANTSKESADGSTGKIPGYMLF CCCCCCCCCCCCEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE SSRAGYDFGPQLSDLNVAVGVKNIFNTQYFTRSFDDNNKGKYVGEPRTVYVQTSVAF ECCCCCCCCCCCCCCEEEEEHHHHHCCHHEEECCCCCCCCCCCCCCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2836368; 7610040; 9278503; 2254251; 2651410 [H]