Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

Click here to switch to the map view.

The map label for this gene is fct [H]

Identifier: 77457101

GI number: 77457101

Start: 1019498

End: 1021603

Strand: Reverse

Name: fct [H]

Synonym: Pfl01_0874

Alternate gene names: 77457101

Gene position: 1021603-1019498 (Counterclockwise)

Preceding gene: 77457102

Following gene: 77457100

Centisome position: 15.87

GC content: 60.54

Gene sequence:

>2106_bases
ATGTCGTCTCGAAAAAAGGCCTCCCTCCTCGGCCTGACCCTTGGCCTGCTGGGCGATCCCGCGTTTGCAGATGAACCGCA
AACGCTTGAACTCGACGCCATCAGCGTCATCTCCGATTACGAATCCCCTGCCGGCCCGGTCAAAGGCTATCGCGCTACCC
GCTCGTCCAGCGCCACCAAAACCGACACCGCGATCCGCGATATTCCGCAGGCCATCAGCGTGGTGCCCGCCAGCGTGCTC
AAGGATCTGGGCAGCACCAGCGTAGAACGCGCGCTGGATTTCGCCGGTGGCGTGTCGAAGCAAAACAACTTCGGCGGCCT
GACGCTTTACGAATACAGCGTGCGCGGCTTCACCACCTCTGAGTTTTACCAAGACGGTTTCAGCGCCAACCGTGGTTATC
CGAGCACACCGGACGCCGCCAACATCGAGCGCATCGAAGTGCTAAAAGGACCGGCCGCCAGCCTGTATGGCCGAGGTGAT
CCGGGCGGCACGGTAAACATCGTCACCAAAAAACCGCAGCCAGCGGCCTTCACCACCCTGCAAACCAGCGCCGGCAGTTG
GGATCGCTATCGCACCGCGCTGGACGTCAACACGCCGCTGGATGATCAGGGTGATGTGCTGTCGCGAATCAATCTCGCGG
TCGAGGACAACAACAGCTTTCGCGACCACGTCGACAGTAAACGTGTATTCGTTGCCCCCTCTTTCAGTTGGCAGTTGAAC
CCGGACACCAGCCTGCTGGTGGAGAGCGAATTCGTGCGTCATAGCTCGACCTTCGACCGCGGCATCGTTGCACCTAACAA
TAAATGGAGCGGCGTCTCGCGCTCGACATTCCTGGGTGAGCCGAACGACGGCAACATCGACAACCACAACAACAGACTGC
AAGCCACGCTTGAGCACCACCTCAACGATGCCTGGAAACTGCGCCTGGTCAGCCATTACAAGGAAGGCAAACTCTGGGGT
TTCGCCTCCGAAAACCGTCCCTTGAATGCCGATGGCCACACCGTCAACCGCCGCTATCGCGAACGCGATACCAACTGGCA
CGACAGCATCACCCAACTGGAACTGCGCGGCCTGTTCGACCTCGGCACCTGGCAGCACGAACTGCTGATCGGCAGCGAGT
ACGAGAATTTCCGCAAGAACGAGCGCGTCACCACCATCGCCGGCGGGCCTTACGCCATCGATATCTATAACCCGGTGTAC
GGCCAGCCCAAACCCAACGGCGCACGCTCCGGTACAGACTTCTTCGAACACGTCGAAAGCCATGCGCTGAACCTGCAGGA
TCAAATCGTCTTCAGCGAAAAACTGCGCGGGATGATCGGGGCCCGATTCGAGCACTTCGAGCAAACCATCGATGACCACA
GCCGCAACACCACCAGCCGCCAGACCCACGACGCGCTCACCCAACGTGCCGGCCTGCTCTATCAACTGACACCGGACACC
GGCCTGTTCGCCAACGCCTCGACCTCATTCAAACCGAACAACGGCCTCGATGTGGCTGGCAAATCCTTCGATCCGGAAGA
AGGCGTGGGTTACGAAATCGGGATCAAGAACGAGCTGTTCGACGAACGTTTAAGCAGCACCCTCGCCTTCTTCCATATCG
ACAAGGAAAACGTCCTCGCCCTCGACCCGGGCACCGATACCAGCCGCGCCATGGGCAAGGCCCGCAGCCGGGGTTTCGAT
CTGCAGGTCACCGGGCAAGTCACCGACGCCGTCAGGGTGATCGGCGCCTTCGCCTGGATCGACGCCGAAGTCACCAAGGG
TGATGCCGCGATCCCCGCCGGTAGCCGCATCCTCGGGGTGGCCAAACGCAGCGGCAGCCTGCTGGGTGTCTACGAGTTTC
AGGACGGCCGCTTGCGCGGCTCGGATATCGGCGCGGCGTTCACTTACGTCGGTGACCGCTCAGGTGAGTCCGGCAGCGAT
TTCGAGCTGCCGGCCTATCACACCGTCGACCTGCTGGCCCATTACAAGGCCAGCGACACCGTCACTCTCGGCCTGAACCT
GAACAACCTGTTCGACGAAAAGTACTACGAGCGCTCGTACAGCAACTATTGGGTCAACCCCGGCGAGCCGCGCAATTTCA
CGGTCAGCCTGACATTCAACCTGTAA

Upstream 100 bases:

>100_bases
AAAAGAAGAGTAAGACTTTGTTCGCGTCACTGACGCGAATAACAGACATTCTCAACAGGCATGTTATATTGTTTCAATTA
GCACATTGGAACAACATAAC

Downstream 100 bases:

>100_bases
AAGGACGTCACCATGCATTTCGGCAAACTCTTATTGATCATCGCTGCGTTGTTCGCTGGCCAAGCATCAGCGCATGGTCT
GTGGACCGAACAACGACGCG

Product: TonB-dependent siderophore receptor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 701; Mature: 700

Protein sequence:

>701_residues
MSSRKKASLLGLTLGLLGDPAFADEPQTLELDAISVISDYESPAGPVKGYRATRSSSATKTDTAIRDIPQAISVVPASVL
KDLGSTSVERALDFAGGVSKQNNFGGLTLYEYSVRGFTTSEFYQDGFSANRGYPSTPDAANIERIEVLKGPAASLYGRGD
PGGTVNIVTKKPQPAAFTTLQTSAGSWDRYRTALDVNTPLDDQGDVLSRINLAVEDNNSFRDHVDSKRVFVAPSFSWQLN
PDTSLLVESEFVRHSSTFDRGIVAPNNKWSGVSRSTFLGEPNDGNIDNHNNRLQATLEHHLNDAWKLRLVSHYKEGKLWG
FASENRPLNADGHTVNRRYRERDTNWHDSITQLELRGLFDLGTWQHELLIGSEYENFRKNERVTTIAGGPYAIDIYNPVY
GQPKPNGARSGTDFFEHVESHALNLQDQIVFSEKLRGMIGARFEHFEQTIDDHSRNTTSRQTHDALTQRAGLLYQLTPDT
GLFANASTSFKPNNGLDVAGKSFDPEEGVGYEIGIKNELFDERLSSTLAFFHIDKENVLALDPGTDTSRAMGKARSRGFD
LQVTGQVTDAVRVIGAFAWIDAEVTKGDAAIPAGSRILGVAKRSGSLLGVYEFQDGRLRGSDIGAAFTYVGDRSGESGSD
FELPAYHTVDLLAHYKASDTVTLGLNLNNLFDEKYYERSYSNYWVNPGEPRNFTVSLTFNL

Sequences:

>Translated_701_residues
MSSRKKASLLGLTLGLLGDPAFADEPQTLELDAISVISDYESPAGPVKGYRATRSSSATKTDTAIRDIPQAISVVPASVL
KDLGSTSVERALDFAGGVSKQNNFGGLTLYEYSVRGFTTSEFYQDGFSANRGYPSTPDAANIERIEVLKGPAASLYGRGD
PGGTVNIVTKKPQPAAFTTLQTSAGSWDRYRTALDVNTPLDDQGDVLSRINLAVEDNNSFRDHVDSKRVFVAPSFSWQLN
PDTSLLVESEFVRHSSTFDRGIVAPNNKWSGVSRSTFLGEPNDGNIDNHNNRLQATLEHHLNDAWKLRLVSHYKEGKLWG
FASENRPLNADGHTVNRRYRERDTNWHDSITQLELRGLFDLGTWQHELLIGSEYENFRKNERVTTIAGGPYAIDIYNPVY
GQPKPNGARSGTDFFEHVESHALNLQDQIVFSEKLRGMIGARFEHFEQTIDDHSRNTTSRQTHDALTQRAGLLYQLTPDT
GLFANASTSFKPNNGLDVAGKSFDPEEGVGYEIGIKNELFDERLSSTLAFFHIDKENVLALDPGTDTSRAMGKARSRGFD
LQVTGQVTDAVRVIGAFAWIDAEVTKGDAAIPAGSRILGVAKRSGSLLGVYEFQDGRLRGSDIGAAFTYVGDRSGESGSD
FELPAYHTVDLLAHYKASDTVTLGLNLNNLFDEKYYERSYSNYWVNPGEPRNFTVSLTFNL
>Mature_700_residues
SSRKKASLLGLTLGLLGDPAFADEPQTLELDAISVISDYESPAGPVKGYRATRSSSATKTDTAIRDIPQAISVVPASVLK
DLGSTSVERALDFAGGVSKQNNFGGLTLYEYSVRGFTTSEFYQDGFSANRGYPSTPDAANIERIEVLKGPAASLYGRGDP
GGTVNIVTKKPQPAAFTTLQTSAGSWDRYRTALDVNTPLDDQGDVLSRINLAVEDNNSFRDHVDSKRVFVAPSFSWQLNP
DTSLLVESEFVRHSSTFDRGIVAPNNKWSGVSRSTFLGEPNDGNIDNHNNRLQATLEHHLNDAWKLRLVSHYKEGKLWGF
ASENRPLNADGHTVNRRYRERDTNWHDSITQLELRGLFDLGTWQHELLIGSEYENFRKNERVTTIAGGPYAIDIYNPVYG
QPKPNGARSGTDFFEHVESHALNLQDQIVFSEKLRGMIGARFEHFEQTIDDHSRNTTSRQTHDALTQRAGLLYQLTPDTG
LFANASTSFKPNNGLDVAGKSFDPEEGVGYEIGIKNELFDERLSSTLAFFHIDKENVLALDPGTDTSRAMGKARSRGFDL
QVTGQVTDAVRVIGAFAWIDAEVTKGDAAIPAGSRILGVAKRSGSLLGVYEFQDGRLRGSDIGAAFTYVGDRSGESGSDF
ELPAYHTVDLLAHYKASDTVTLGLNLNNLFDEKYYERSYSNYWVNPGEPRNFTVSLTFNL

Specific function: Involved in the initial step of iron uptake by binding chrysobactin, an iron chelatin siderophore that allows the bacteria to extract iron from the environment [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB-dependent receptor family [H]

Homologues:

Organism=Escherichia coli, GI1786344, Length=723, Percent_Identity=26.417704011065, Blast_Score=206, Evalue=4e-54,
Organism=Escherichia coli, GI1787344, Length=749, Percent_Identity=25.5006675567423, Blast_Score=165, Evalue=1e-41,
Organism=Escherichia coli, GI1787024, Length=779, Percent_Identity=26.0590500641849, Blast_Score=150, Evalue=4e-37,
Organism=Escherichia coli, GI1787723, Length=685, Percent_Identity=22.3357664233577, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI1790743, Length=367, Percent_Identity=26.4305177111717, Blast_Score=70, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012910
- InterPro:   IPR000531
- InterPro:   IPR010916
- InterPro:   IPR010105 [H]

Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]

EC number: NA

Molecular weight: Translated: 77236; Mature: 77105

Theoretical pI: Translated: 5.33; Mature: 5.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
0.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSRKKASLLGLTLGLLGDPAFADEPQTLELDAISVISDYESPAGPVKGYRATRSSSATK
CCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
TDTAIRDIPQAISVVPASVLKDLGSTSVERALDFAGGVSKQNNFGGLTLYEYSVRGFTTS
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCHH
EFYQDGFSANRGYPSTPDAANIERIEVLKGPAASLYGRGDPGGTVNIVTKKPQPAAFTTL
HHHHCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHCCCCCCCCEEEEEECCCCCCEEEEE
QTSAGSWDRYRTALDVNTPLDDQGDVLSRINLAVEDNNSFRDHVDSKRVFVAPSFSWQLN
ECCCCCCHHEEEEEECCCCCCCCCCHHHHEEEEEECCCCHHHHCCCCEEEEECCCEEEEC
PDTSLLVESEFVRHSSTFDRGIVAPNNKWSGVSRSTFLGEPNDGNIDNHNNRLQATLEHH
CCCEEEEEHHHHHCCCCCCCCEECCCCCCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHH
LNDAWKLRLVSHYKEGKLWGFASENRPLNADGHTVNRRYRERDTNWHDSITQLELRGLFD
CCCCEEEEEEHHCCCCCEEEECCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHEEEHHHCC
LGTWQHELLIGSEYENFRKNERVTTIAGGPYAIDIYNPVYGQPKPNGARSGTDFFEHVES
CCCCEEEEEECCCHHHHHCCCCEEEEECCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHH
HALNLQDQIVFSEKLRGMIGARFEHFEQTIDDHSRNTTSRQTHDALTQRAGLLYQLTPDT
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCEEEEECCCC
GLFANASTSFKPNNGLDVAGKSFDPEEGVGYEIGIKNELFDERLSSTLAFFHIDKENVLA
CEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHCEEEEEEECCCCEEE
LDPGTDTSRAMGKARSRGFDLQVTGQVTDAVRVIGAFAWIDAEVTKGDAAIPAGSRILGV
ECCCCCHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHEEEEEECCCCCCCCCCCEEEEE
AKRSGSLLGVYEFQDGRLRGSDIGAAFTYVGDRSGESGSDFELPAYHTVDLLAHYKASDT
EECCCCEEEEEEECCCEECCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCE
VTLGLNLNNLFDEKYYERSYSNYWVNPGEPRNFTVSLTFNL
EEEEECHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEC
>Mature Secondary Structure 
SSRKKASLLGLTLGLLGDPAFADEPQTLELDAISVISDYESPAGPVKGYRATRSSSATK
CCCHHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
TDTAIRDIPQAISVVPASVLKDLGSTSVERALDFAGGVSKQNNFGGLTLYEYSVRGFTTS
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCHH
EFYQDGFSANRGYPSTPDAANIERIEVLKGPAASLYGRGDPGGTVNIVTKKPQPAAFTTL
HHHHCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHCCCCCCCCEEEEEECCCCCCEEEEE
QTSAGSWDRYRTALDVNTPLDDQGDVLSRINLAVEDNNSFRDHVDSKRVFVAPSFSWQLN
ECCCCCCHHEEEEEECCCCCCCCCCHHHHEEEEEECCCCHHHHCCCCEEEEECCCEEEEC
PDTSLLVESEFVRHSSTFDRGIVAPNNKWSGVSRSTFLGEPNDGNIDNHNNRLQATLEHH
CCCEEEEEHHHHHCCCCCCCCEECCCCCCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHH
LNDAWKLRLVSHYKEGKLWGFASENRPLNADGHTVNRRYRERDTNWHDSITQLELRGLFD
CCCCEEEEEEHHCCCCCEEEECCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHEEEHHHCC
LGTWQHELLIGSEYENFRKNERVTTIAGGPYAIDIYNPVYGQPKPNGARSGTDFFEHVES
CCCCEEEEEECCCHHHHHCCCCEEEEECCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHH
HALNLQDQIVFSEKLRGMIGARFEHFEQTIDDHSRNTTSRQTHDALTQRAGLLYQLTPDT
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCEEEEECCCC
GLFANASTSFKPNNGLDVAGKSFDPEEGVGYEIGIKNELFDERLSSTLAFFHIDKENVLA
CEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHCEEEEEEECCCCEEE
LDPGTDTSRAMGKARSRGFDLQVTGQVTDAVRVIGAFAWIDAEVTKGDAAIPAGSRILGV
ECCCCCHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHEEEEEECCCCCCCCCCCEEEEE
AKRSGSLLGVYEFQDGRLRGSDIGAAFTYVGDRSGESGSDFELPAYHTVDLLAHYKASDT
EECCCCEEEEEEECCCEECCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCE
VTLGLNLNNLFDEKYYERSYSNYWVNPGEPRNFTVSLTFNL
EEEEECHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8576065 [H]