| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77456955
Identifier: 77456955
GI number: 77456955
Start: 854414
End: 854797
Strand: Reverse
Name: 77456955
Synonym: Pfl01_0727
Alternate gene names: NA
Gene position: 854797-854414 (Counterclockwise)
Preceding gene: 77456956
Following gene: 77456953
Centisome position: 13.28
GC content: 62.5
Gene sequence:
>384_bases ATGTTCAAGGTAACGCCAAACCCACCGCTCACCGAACCCACAACCCTCCCGGATCCGGCATCCCCCTACGAATGCCCCGG TTCGAAACGCTTCAACGAAGCCGCCGAACGCGCCCTCGATTATCACCTGGGCCCACTCAGCGCCCACATCATGGCCGCGC CCTACAAACCCAACACCCTCTACCAGGCTCACCCCGAAGCCGACACCGAATCCCTGCTGGTCGACGCCAGCGAATCCCTC GGCTCCGCCACCGTCATGCTCAACAATCATGTGGCGCTGGTCGAAGGCAGCCACCGCAAGACCCTGCAAGGCATCGCCCA GATCGTGATGATCGCCGAACTGGCCGTTAACCGTGCGCTGGACAAGGTCGTGCCGACGGATTGA
Upstream 100 bases:
>100_bases GCGCCGGGTTGTGATGCTTACCGGGCCGCTAACTTGCGCACAGCTGCCTCCCTTTTGCTCAGCGGCGAAATGGGCGCAGC CTCATCAGAGGTAAGCATCT
Downstream 100 bases:
>100_bases TGCGGGAGGTGGCGAGTGCGGTGCACTCGCCATTTTTTTGAGCGGTGTTTATCAACCGCTGAGGTTTTCTGAACGTGATG GCAGATCAAGTTCGACGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 127; Mature: 127
Protein sequence:
>127_residues MFKVTPNPPLTEPTTLPDPASPYECPGSKRFNEAAERALDYHLGPLSAHIMAAPYKPNTLYQAHPEADTESLLVDASESL GSATVMLNNHVALVEGSHRKTLQGIAQIVMIAELAVNRALDKVVPTD
Sequences:
>Translated_127_residues MFKVTPNPPLTEPTTLPDPASPYECPGSKRFNEAAERALDYHLGPLSAHIMAAPYKPNTLYQAHPEADTESLLVDASESL GSATVMLNNHVALVEGSHRKTLQGIAQIVMIAELAVNRALDKVVPTD >Mature_127_residues MFKVTPNPPLTEPTTLPDPASPYECPGSKRFNEAAERALDYHLGPLSAHIMAAPYKPNTLYQAHPEADTESLLVDASESL GSATVMLNNHVALVEGSHRKTLQGIAQIVMIAELAVNRALDKVVPTD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13687; Mature: 13687
Theoretical pI: Translated: 5.10; Mature: 5.10
Prosite motif: PS00430 TONB_DEPENDENT_REC_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKVTPNPPLTEPTTLPDPASPYECPGSKRFNEAAERALDYHLGPLSAHIMAAPYKPNTL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCE YQAHPEADTESLLVDASESLGSATVMLNNHVALVEGSHRKTLQGIAQIVMIAELAVNRAL EEECCCCCCHHEEEECCCCCCCEEEEECCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHH DKVVPTD HHCCCCC >Mature Secondary Structure MFKVTPNPPLTEPTTLPDPASPYECPGSKRFNEAAERALDYHLGPLSAHIMAAPYKPNTL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCE YQAHPEADTESLLVDASESLGSATVMLNNHVALVEGSHRKTLQGIAQIVMIAELAVNRAL EEECCCCCCHHEEEECCCCCCCEEEEECCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHH DKVVPTD HHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA