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The map label for this gene is oruR [H]

Identifier: 77456953

GI number: 77456953

Start: 852943

End: 853971

Strand: Reverse

Name: oruR [H]

Synonym: Pfl01_0725

Alternate gene names: 77456953

Gene position: 853971-852943 (Counterclockwise)

Preceding gene: 77456955

Following gene: 77456945

Centisome position: 13.26

GC content: 61.13

Gene sequence:

>1029_bases
ATGCAATCGCTCGGCTTCACCTCCGTCCCACCGCTGCTCAAATACCTGCGCCATGCCGAACATCTGGGCCTGGCCATCGA
GCCTGCGTTGGCGGCGGCCGGGTTGCAGGCGCAGCAGTTGAGCGACAACAGTCTGCGCTTGCCGGGGGAAACCCATGAGC
GGTTGCTCGATTACTTTTGCGAACACTCGGGCGATCCGCTGTTCGGCCTCAACGCGGCGAATTTCGTCCTGCCCAACTCG
TGGAGCGTGTTGGGTTACATCACCATGAATTGCGCGACATTGGGCGATGCCATGAGCCGCATCATGCCGTTCGAAAAACT
GGTGGGCGACATGGGTGTCAGCCGCGCCGAGGTACACGACAGCCATGTGCACCTGATCTGGAGCTGCCGCTTTGAGCGCC
CGCAGATTCGCCGGCATCTGGTGGAAAACGTGCTTGGCTCATGGCTGCAATACGCACGCTGGATCGCCGATACCCGACTG
TCGCCGGCCGCTGTGTGGCTGGAACACTCGATCCCGGCGGACACGACGCTGGCGCAGTACGAACAGTTTTTCGAATGCCC
GGTGCTGTTCGATCAGCCGTATTCTGCGCTGGTCGTGCCGTTGCCGTATTTGCAGTTGCCGTTGCGCCAGGCCGATGCAC
ATTTGCTGCGCACCCTGGAAGAACACGCACAAAGTCTGATGGCGACACTGGAGGATGCGTCGCTGGAGCAGCGGGTCAAA
AGCATCCTGCGCCAGTTGCTCAAGGAAGGCCTGCCGCGCAAGGAACAAGTGGCCGAACATCTCGCCGTGTCGGTACGCAC
GCTGCAACGCCAGTTGCATCAGGCCGGCACGTCATATCAGCAGATTCTCGACGAACTGCGCCAGGAACTGGCCGAGCATT
ACCTGCTCAACAGCACCCTGCCGATTCAGGACATCGCCCAGTATCTGGGCTTCAGCGAATCACGCTCCTTTCACCGCGCC
TTCAAGAGCCGACGCGGCATGCCGCCCGGTGAGTTTCGGCAGACTCACCGGGTCTCGAACGACGGCTAA

Upstream 100 bases:

>100_bases
TGTATGGTCCCAAGGCCAGCCATTTACTTTATTCGCGGATTCAAATTACCTTTCAGAGCGCTCATCCGCCCCCGGCGGCC
TCGATCAAGAGGATTCGGTC

Downstream 100 bases:

>100_bases
AGACTGATCGCGTTGGTGAACACCAGACGATTACCGAACGGATCGGCGATGGTCATGTCCTGGCTGCCCCACGGCATGGC
CTGAATCTGTGGATGCGAAA

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 342; Mature: 342

Protein sequence:

>342_residues
MQSLGFTSVPPLLKYLRHAEHLGLAIEPALAAAGLQAQQLSDNSLRLPGETHERLLDYFCEHSGDPLFGLNAANFVLPNS
WSVLGYITMNCATLGDAMSRIMPFEKLVGDMGVSRAEVHDSHVHLIWSCRFERPQIRRHLVENVLGSWLQYARWIADTRL
SPAAVWLEHSIPADTTLAQYEQFFECPVLFDQPYSALVVPLPYLQLPLRQADAHLLRTLEEHAQSLMATLEDASLEQRVK
SILRQLLKEGLPRKEQVAEHLAVSVRTLQRQLHQAGTSYQQILDELRQELAEHYLLNSTLPIQDIAQYLGFSESRSFHRA
FKSRRGMPPGEFRQTHRVSNDG

Sequences:

>Translated_342_residues
MQSLGFTSVPPLLKYLRHAEHLGLAIEPALAAAGLQAQQLSDNSLRLPGETHERLLDYFCEHSGDPLFGLNAANFVLPNS
WSVLGYITMNCATLGDAMSRIMPFEKLVGDMGVSRAEVHDSHVHLIWSCRFERPQIRRHLVENVLGSWLQYARWIADTRL
SPAAVWLEHSIPADTTLAQYEQFFECPVLFDQPYSALVVPLPYLQLPLRQADAHLLRTLEEHAQSLMATLEDASLEQRVK
SILRQLLKEGLPRKEQVAEHLAVSVRTLQRQLHQAGTSYQQILDELRQELAEHYLLNSTLPIQDIAQYLGFSESRSFHRA
FKSRRGMPPGEFRQTHRVSNDG
>Mature_342_residues
MQSLGFTSVPPLLKYLRHAEHLGLAIEPALAAAGLQAQQLSDNSLRLPGETHERLLDYFCEHSGDPLFGLNAANFVLPNS
WSVLGYITMNCATLGDAMSRIMPFEKLVGDMGVSRAEVHDSHVHLIWSCRFERPQIRRHLVENVLGSWLQYARWIADTRL
SPAAVWLEHSIPADTTLAQYEQFFECPVLFDQPYSALVVPLPYLQLPLRQADAHLLRTLEEHAQSLMATLEDASLEQRVK
SILRQLLKEGLPRKEQVAEHLAVSVRTLQRQLHQAGTSYQQILDELRQELAEHYLLNSTLPIQDIAQYLGFSESRSFHRA
FKSRRGMPPGEFRQTHRVSNDG

Specific function: Probably activates the ArgJ gene that encodes ornithine acetyltransferase. Binds to its own promoter-operator region. Probably binds ornithine [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR020449
- InterPro:   IPR018060 [H]

Pfam domain/function: PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 38831; Mature: 38831

Theoretical pI: Translated: 6.61; Mature: 6.61

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSLGFTSVPPLLKYLRHAEHLGLAIEPALAAAGLQAQQLSDNSLRLPGETHERLLDYFC
CCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHCCCCCCCCCCHHHHHHHHHHH
EHSGDPLFGLNAANFVLPNSWSVLGYITMNCATLGDAMSRIMPFEKLVGDMGVSRAEVHD
HCCCCCEEECCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHCC
SHVHLIWSCRFERPQIRRHLVENVLGSWLQYARWIADTRLSPAAVWLEHSIPADTTLAQY
CCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCHHHHHH
EQFFECPVLFDQPYSALVVPLPYLQLPLRQADAHLLRTLEEHAQSLMATLEDASLEQRVK
HHHHCCCCEECCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SILRQLLKEGLPRKEQVAEHLAVSVRTLQRQLHQAGTSYQQILDELRQELAEHYLLNSTL
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCC
PIQDIAQYLGFSESRSFHRAFKSRRGMPPGEFRQTHRVSNDG
CHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHCCCCCC
>Mature Secondary Structure
MQSLGFTSVPPLLKYLRHAEHLGLAIEPALAAAGLQAQQLSDNSLRLPGETHERLLDYFC
CCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHCCCCCCCCCCHHHHHHHHHHH
EHSGDPLFGLNAANFVLPNSWSVLGYITMNCATLGDAMSRIMPFEKLVGDMGVSRAEVHD
HCCCCCEEECCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHCC
SHVHLIWSCRFERPQIRRHLVENVLGSWLQYARWIADTRLSPAAVWLEHSIPADTTLAQY
CCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCHHHHHH
EQFFECPVLFDQPYSALVVPLPYLQLPLRQADAHLLRTLEEHAQSLMATLEDASLEQRVK
HHHHCCCCEECCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SILRQLLKEGLPRKEQVAEHLAVSVRTLQRQLHQAGTSYQQILDELRQELAEHYLLNSTL
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCC
PIQDIAQYLGFSESRSFHRAFKSRRGMPPGEFRQTHRVSNDG
CHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9401045; 10984043 [H]