| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
Click here to switch to the map view.
The map label for this gene is cobK [H]
Identifier: 77456829
GI number: 77456829
Start: 693509
End: 694237
Strand: Reverse
Name: cobK [H]
Synonym: Pfl01_0601
Alternate gene names: 77456829
Gene position: 694237-693509 (Counterclockwise)
Preceding gene: 77456830
Following gene: 77456828
Centisome position: 10.78
GC content: 66.8
Gene sequence:
>729_bases ATGAAGCGAATCTTGTTGCTGGGCGGTGTGACTGAAGCGCTGGCCATCGCGCGCACGTTGGGGCCGGAACACATTTACAG CCTGGCCGGCGTCGGCCGGGTGCCGACCGATCTGACCTGTCAGGTGCGCGTCGGCGGCTACGGTGGCGCCGAAGGTCTGG CGCAGTTCATTCGCGCTAAAGGCATCACGCTTTTACTCGACGCGACCCATCCCTACGCCGCACAGATCAGCCAGAACGCC GCCACCGCCGCGCAACTCACCGGCATCCCCTGCTGGGCCCTGCGCCGCCCGGCCTGGCAACCGCAACCGGGCGATGACTG GCGCGAAGTCGCCGACTGGGCCGAACTGATCACCGCCCTCGAACCCTTCCGCCGCCCCCTGTTCACCCTCGGCCGCGAAC CGCTGCAACACCTCGATGAAATCCCCGCGCACCAGTTCTGGACCCTGCGCGCCCTCGACGTCTACCCCGGCAACGAACGC TGCGAAGTCATCGGCGCCCGTGGACCGTTTCTGCTGGAGGACGAGCGAGCGCTGTTCGAACGCCGGCAGATCGACGTGCT GATCAGCAAGAACAGCGGCAGCACCGCAACCGAGCCCAAGCTGGAAGTGGCGCGAGAGCTTGGGGTGCCGGTGATGGTGT TGAAGCGGCCGGAGTTGGCGAGGGTTGATCGGGAGTTTTGGACGGTTGCTGACGCCATCGCTGCCCTCGCGGCCGGAGTC CGACCGTGA
Upstream 100 bases:
>100_bases CTCTGGAGTTCGCACGCAGCGTGGTACCGGCGCAGGTCCAGGTCGAAGTGTTTGCGATAGATCGTCAGGGCGGCATCGTC GGCCATGCGGGAGCCTTTGT
Downstream 100 bases:
>100_bases AAAACAAAAAGCTCAAGTCCTACTGAGTGCTAGGACACTGCCCACAAGAACTTAAAGAATCGCTGACTATCTGCACGAGC GGCCCAGGCTTACGTTTAGC
Product: cobalt-precorrin-6x reductase
Products: NA
Alternate protein names: Precorrin-6X reductase [H]
Number of amino acids: Translated: 242; Mature: 242
Protein sequence:
>242_residues MKRILLLGGVTEALAIARTLGPEHIYSLAGVGRVPTDLTCQVRVGGYGGAEGLAQFIRAKGITLLLDATHPYAAQISQNA ATAAQLTGIPCWALRRPAWQPQPGDDWREVADWAELITALEPFRRPLFTLGREPLQHLDEIPAHQFWTLRALDVYPGNER CEVIGARGPFLLEDERALFERRQIDVLISKNSGSTATEPKLEVARELGVPVMVLKRPELARVDREFWTVADAIAALAAGV RP
Sequences:
>Translated_242_residues MKRILLLGGVTEALAIARTLGPEHIYSLAGVGRVPTDLTCQVRVGGYGGAEGLAQFIRAKGITLLLDATHPYAAQISQNA ATAAQLTGIPCWALRRPAWQPQPGDDWREVADWAELITALEPFRRPLFTLGREPLQHLDEIPAHQFWTLRALDVYPGNER CEVIGARGPFLLEDERALFERRQIDVLISKNSGSTATEPKLEVARELGVPVMVLKRPELARVDREFWTVADAIAALAAGV RP >Mature_242_residues MKRILLLGGVTEALAIARTLGPEHIYSLAGVGRVPTDLTCQVRVGGYGGAEGLAQFIRAKGITLLLDATHPYAAQISQNA ATAAQLTGIPCWALRRPAWQPQPGDDWREVADWAELITALEPFRRPLFTLGREPLQHLDEIPAHQFWTLRALDVYPGNER CEVIGARGPFLLEDERALFERRQIDVLISKNSGSTATEPKLEVARELGVPVMVLKRPELARVDREFWTVADAIAALAAGV RP
Specific function: Catalyzes the reduction of the macrocycle of precorrin- 6X into precorrin-6Y [H]
COG id: COG2099
COG function: function code H; Precorrin-6x reductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the precorrin-6x reductase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003723 [H]
Pfam domain/function: PF02571 CbiJ [H]
EC number: =1.3.1.54 [H]
Molecular weight: Translated: 26599; Mature: 26599
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: PS00304 SASP_1 ; PS51014 COBK_CBIJ
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRILLLGGVTEALAIARTLGPEHIYSLAGVGRVPTDLTCQVRVGGYGGAEGLAQFIRAK CCEEEEECCHHHHHHHHHHCCHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHHC GITLLLDATHPYAAQISQNAATAAQLTGIPCWALRRPAWQPQPGDDWREVADWAELITAL CCEEEEECCCCHHHHHHHCHHHHHHHCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH EPFRRPLFTLGREPLQHLDEIPAHQFWTLRALDVYPGNERCEVIGARGPFLLEDERALFE HHHHHHHHHHCHHHHHHHHHCCCCCEEEEEEEEECCCCCCEEEEECCCCEEECHHHHHHH RRQIDVLISKNSGSTATEPKLEVARELGVPVMVLKRPELARVDREFWTVADAIAALAAGV HHCEEEEEECCCCCCCCCHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCC RP CC >Mature Secondary Structure MKRILLLGGVTEALAIARTLGPEHIYSLAGVGRVPTDLTCQVRVGGYGGAEGLAQFIRAK CCEEEEECCHHHHHHHHHHCCHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHHC GITLLLDATHPYAAQISQNAATAAQLTGIPCWALRRPAWQPQPGDDWREVADWAELITAL CCEEEEECCCCHHHHHHHCHHHHHHHCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH EPFRRPLFTLGREPLQHLDEIPAHQFWTLRALDVYPGNERCEVIGARGPFLLEDERALFE HHHHHHHHHHCHHHHHHHHHCCCCCEEEEEEEEECCCCCCEEEEECCCCEEECHHHHHHH RRQIDVLISKNSGSTATEPKLEVARELGVPVMVLKRPELARVDREFWTVADAIAALAAGV HHCEEEEEECCCCCCCCCHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCC RP CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2211521; 1732193 [H]