| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77456828
Identifier: 77456828
GI number: 77456828
Start: 693069
End: 693482
Strand: Reverse
Name: 77456828
Synonym: Pfl01_0600
Alternate gene names: NA
Gene position: 693482-693069 (Counterclockwise)
Preceding gene: 77456829
Following gene: 77456827
Centisome position: 10.77
GC content: 51.93
Gene sequence:
>414_bases GTGCTAGGACACTGCCCACAAGAACTTAAAGAATCGCTGACTATCTGCACGAGCGGCCCAGGCTTACGTTTAGCGTTTCA TCGAATTTGTGAGCACGTTCCAATGACCGGAAAATTCACCCGCTTCGACATCAAGGACTTTCTCCACACGCCTGCTGAAC TGGTGCACTACGTCAAGGCATGTTCGGAACTGGACTCAGGCGATGGACGATTCAACCGCGTGGCGCTCCGAGACTATAAG CAGACCATCCGATTGAGAATTCAATCTGATCCGGATTTCGCACAGGCATTGCGAATCGAAGCCGCTACACTCTTTCATAA CGGCGAGACGGAACTGGCAAGCATGCTACTCGCACAATTGCATGTAGCGCTGCGACACCAAACCGCACGACGCTTTTTTA CTTATCGGCCCTGA
Upstream 100 bases:
>100_bases TGGCGAGGGTTGATCGGGAGTTTTGGACGGTTGCTGACGCCATCGCTGCCCTCGCGGCCGGAGTCCGACCGTGAAAAACA AAAAGCTCAAGTCCTACTGA
Downstream 100 bases:
>100_bases TCAGGCTAAATAGCCGCGCCTGATCGCCCACCCTACGGATCTGTCCCATGAACCGACACCGGCTCGCATTTGCCTGGATC GCCTGCTTTGCAGTGCTGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 137; Mature: 137
Protein sequence:
>137_residues MLGHCPQELKESLTICTSGPGLRLAFHRICEHVPMTGKFTRFDIKDFLHTPAELVHYVKACSELDSGDGRFNRVALRDYK QTIRLRIQSDPDFAQALRIEAATLFHNGETELASMLLAQLHVALRHQTARRFFTYRP
Sequences:
>Translated_137_residues MLGHCPQELKESLTICTSGPGLRLAFHRICEHVPMTGKFTRFDIKDFLHTPAELVHYVKACSELDSGDGRFNRVALRDYK QTIRLRIQSDPDFAQALRIEAATLFHNGETELASMLLAQLHVALRHQTARRFFTYRP >Mature_137_residues MLGHCPQELKESLTICTSGPGLRLAFHRICEHVPMTGKFTRFDIKDFLHTPAELVHYVKACSELDSGDGRFNRVALRDYK QTIRLRIQSDPDFAQALRIEAATLFHNGETELASMLLAQLHVALRHQTARRFFTYRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15709; Mature: 15709
Theoretical pI: Translated: 8.66; Mature: 8.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLGHCPQELKESLTICTSGPGLRLAFHRICEHVPMTGKFTRFDIKDFLHTPAELVHYVKA CCCCCHHHHHHHHEECCCCCCHHHHHHHHHHHCCCCCCEEHCCHHHHHCCHHHHHHHHHH CSELDSGDGRFNRVALRDYKQTIRLRIQSDPDFAQALRIEAATLFHNGETELASMLLAQL HHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHH HVALRHQTARRFFTYRP HHHHHHHHHHHHCCCCC >Mature Secondary Structure MLGHCPQELKESLTICTSGPGLRLAFHRICEHVPMTGKFTRFDIKDFLHTPAELVHYVKA CCCCCHHHHHHHHEECCCCCCHHHHHHHHHHHCCCCCCEEHCCHHHHHCCHHHHHHHHHH CSELDSGDGRFNRVALRDYKQTIRLRIQSDPDFAQALRIEAATLFHNGETELASMLLAQL HHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHH HVALRHQTARRFFTYRP HHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA