Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
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Accession | NC_007492 |
Length | 6,438,405 |
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The map label for this gene is 77456683
Identifier: 77456683
GI number: 77456683
Start: 522753
End: 523433
Strand: Direct
Name: 77456683
Synonym: Pfl01_0455
Alternate gene names: NA
Gene position: 522753-523433 (Clockwise)
Preceding gene: 77456682
Following gene: 77456684
Centisome position: 8.12
GC content: 61.82
Gene sequence:
>681_bases GTGCCGCTGAAGCCGTCGGAGCAGTTGTTCGCGATTTTCAGTAGCGCCAGTGCGGCGGAGCCGCTGAAGGCCTGGCCGCT GAAAGCGCAGATGCCGAAACCGGTCTGGGCGGAAACGATCTATGCCGAGTGGGACGCGGTGATGCCCTACGTGGGAATCG TCGACGCGGGCAGTGAGTTTCTGGATTGGGTGGCGACCACGGAGTCTCGGGACTGGGGCTGGCTGGCGGTTTCTTCGGCG GGGCTTGAAGCGGTGGTCGAGCACTTTCGCAGTTTGACTCAGGTGCTGATGCCGGACGGGAAAGCGGTGTTTTTCCGGTT CTGGGATGGGCGGTTTTTGTTGCCGATCCTTGAGTCGTCCGAGGTGGATGCCGGGCAACTACTACCGGTCCTCACGCGAG GCTTGATCAATGGTCAGACCGTCGAGATCGGGGGCAGGGCGCGGGTCTCGGGTCGGGAGTTTCCTTGGTGGTCGGTGCCG GAAAAGCTGCTGGCGCAATTCGGCGATGATGCCCGGATCAACAACGCCTTGCAGTGGTTGAGCGAGGAGCAGCCGGCGTT GTTCGAAGCGTTCCCCGCCGATGTCTTGCGCTGCAAGGTTGTCAGGTTTTTTGCGGTTTCGGCGTCGGACGAATCGTCGG CTTCGGCATTGCTGGACTACTTGCGGGACGAGTCAGAGTGA
Upstream 100 bases:
>100_bases GCTGCGCAAATCATGAGCCTGAAAGGTGATGCGCCTTTCTGTGAAGAATGCGAGCGCTGCAAAGGTGGTGTCTGTGCAGC CTGATCAATGGTTGAAGGAT
Downstream 100 bases:
>100_bases AATTTCCGGGCAAAGGCTTCGGACGTTTCCCGCGAGTTGCGGCGGTTTGCGTGAACTGGTGGGCGCGGTGCTGCGAGGAT AGTCTTTGGCTGTCTCCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 226; Mature: 225
Protein sequence:
>226_residues MPLKPSEQLFAIFSSASAAEPLKAWPLKAQMPKPVWAETIYAEWDAVMPYVGIVDAGSEFLDWVATTESRDWGWLAVSSA GLEAVVEHFRSLTQVLMPDGKAVFFRFWDGRFLLPILESSEVDAGQLLPVLTRGLINGQTVEIGGRARVSGREFPWWSVP EKLLAQFGDDARINNALQWLSEEQPALFEAFPADVLRCKVVRFFAVSASDESSASALLDYLRDESE
Sequences:
>Translated_226_residues MPLKPSEQLFAIFSSASAAEPLKAWPLKAQMPKPVWAETIYAEWDAVMPYVGIVDAGSEFLDWVATTESRDWGWLAVSSA GLEAVVEHFRSLTQVLMPDGKAVFFRFWDGRFLLPILESSEVDAGQLLPVLTRGLINGQTVEIGGRARVSGREFPWWSVP EKLLAQFGDDARINNALQWLSEEQPALFEAFPADVLRCKVVRFFAVSASDESSASALLDYLRDESE >Mature_225_residues PLKPSEQLFAIFSSASAAEPLKAWPLKAQMPKPVWAETIYAEWDAVMPYVGIVDAGSEFLDWVATTESRDWGWLAVSSAG LEAVVEHFRSLTQVLMPDGKAVFFRFWDGRFLLPILESSEVDAGQLLPVLTRGLINGQTVEIGGRARVSGREFPWWSVPE KLLAQFGDDARINNALQWLSEEQPALFEAFPADVLRCKVVRFFAVSASDESSASALLDYLRDESE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25157; Mature: 25026
Theoretical pI: Translated: 4.25; Mature: 4.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLKPSEQLFAIFSSASAAEPLKAWPLKAQMPKPVWAETIYAEWDAVMPYVGIVDAGSEF CCCCCHHHHHHHHHCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCEEECCCHHH LDWVATTESRDWGWLAVSSAGLEAVVEHFRSLTQVLMPDGKAVFFRFWDGRFLLPILESS HHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCEEEEEEECCC EVDAGQLLPVLTRGLINGQTVEIGGRARVSGREFPWWSVPEKLLAQFGDDARINNALQWL CCCHHHHHHHHHHHHCCCCEEEECCEEEECCCCCCCCCCCHHHHHHCCCCHHHHHHHHHH SEEQPALFEAFPADVLRCKVVRFFAVSASDESSASALLDYLRDESE CCCCCHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHCCCC >Mature Secondary Structure PLKPSEQLFAIFSSASAAEPLKAWPLKAQMPKPVWAETIYAEWDAVMPYVGIVDAGSEF CCCCHHHHHHHHHCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCEEECCCHHH LDWVATTESRDWGWLAVSSAGLEAVVEHFRSLTQVLMPDGKAVFFRFWDGRFLLPILESS HHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCEEEEEEECCC EVDAGQLLPVLTRGLINGQTVEIGGRARVSGREFPWWSVPEKLLAQFGDDARINNALQWL CCCHHHHHHHHHHHHCCCCEEEECCEEEECCCCCCCCCCCHHHHHHCCCCHHHHHHHHHH SEEQPALFEAFPADVLRCKVVRFFAVSASDESSASALLDYLRDESE CCCCCHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA