Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
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Accession | NC_007492 |
Length | 6,438,405 |
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The map label for this gene is 77456684
Identifier: 77456684
GI number: 77456684
Start: 523763
End: 524080
Strand: Direct
Name: 77456684
Synonym: Pfl01_0456
Alternate gene names: NA
Gene position: 523763-524080 (Clockwise)
Preceding gene: 77456683
Following gene: 77456686
Centisome position: 8.13
GC content: 61.01
Gene sequence:
>318_bases ATGAGCACGCTTCATCCAGATCCACCCTACGAGCCCTTCATCCCCCACCCCGACAACCGCCTCATGGCGCTGACCAGCAA CTGCAACGACATGCCCACCCTGTTCATCGACACCCACGCCCCGCTCGACATCCTGATGGACGCCGCCAACTACCGCATCC GCGCCGTGATCCAGGTCCTGGAAAACATGTGCATGCGCGGCTCGGTCGAGTGCGACTCGGTCATCCTCAGCGACTTCGCC CAGCTCTGCGTGATTCCGTTGCGTGATGGCTGTGATGTGTTGGATGTGATTGGCCGCAAATTGCGTGACCGGCCTTAG
Upstream 100 bases:
>100_bases GAGTGCTCTGGTCTCAGTCCTCCTACCCCGCGCATGGCTGCCACCCAATCCTGTAGGAGGGAAACGGTGTGCGCCTCTTT CACTACCAGAGGATTAAACA
Downstream 100 bases:
>100_bases ATCCCATCCCCTCACCCTAGCCCTCTCCCCGAGGGAGAGGGGACCGACCAAGGTGAATAGGTGACGTGCGCCGACCTGCA ACTTCGGTGGTGAACTTGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 105; Mature: 104
Protein sequence:
>105_residues MSTLHPDPPYEPFIPHPDNRLMALTSNCNDMPTLFIDTHAPLDILMDAANYRIRAVIQVLENMCMRGSVECDSVILSDFA QLCVIPLRDGCDVLDVIGRKLRDRP
Sequences:
>Translated_105_residues MSTLHPDPPYEPFIPHPDNRLMALTSNCNDMPTLFIDTHAPLDILMDAANYRIRAVIQVLENMCMRGSVECDSVILSDFA QLCVIPLRDGCDVLDVIGRKLRDRP >Mature_104_residues STLHPDPPYEPFIPHPDNRLMALTSNCNDMPTLFIDTHAPLDILMDAANYRIRAVIQVLENMCMRGSVECDSVILSDFAQ LCVIPLRDGCDVLDVIGRKLRDRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11839; Mature: 11708
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.8 %Cys (Translated Protein) 5.7 %Met (Translated Protein) 10.5 %Cys+Met (Translated Protein) 4.8 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 9.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTLHPDPPYEPFIPHPDNRLMALTSNCNDMPTLFIDTHAPLDILMDAANYRIRAVIQVL CCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEECCCCHHHHHHCCCHHHHHHHHHH ENMCMRGSVECDSVILSDFAQLCVIPLRDGCDVLDVIGRKLRDRP HHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCC >Mature Secondary Structure STLHPDPPYEPFIPHPDNRLMALTSNCNDMPTLFIDTHAPLDILMDAANYRIRAVIQVL CCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEECCCCHHHHHHCCCHHHHHHHHHH ENMCMRGSVECDSVILSDFAQLCVIPLRDGCDVLDVIGRKLRDRP HHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA