Click here to switch to the map view.

The map label for this gene is 77456682

Identifier: 77456682

GI number: 77456682

Start: 520721

End: 522736

Strand: Direct

Name: 77456682

Synonym: Pfl01_0454

Alternate gene names: NA

Gene position: 520721-522736 (Clockwise)

Preceding gene: 77456681

Following gene: 77456683

Centisome position: 8.09

GC content: 61.36

Gene sequence:

>2016_bases
ATGTTCGCGCCTGCCAATCAACCGCGTTTCACGTTGACCGTCGAAGGCGCCCAGTTTGACCTCAAAGTCCTTGAGTTCAC
GGGCAAGGAAGCCATCAGCCAACCCTTTCGCTTTGACCTGGAGCTGGTCAGTGAACGGCCGGATCTGGATCTGGAAAGCC
TGCTGCACTGTCAGGCTTTTCTGAGTTTTGATGAAGAAGGTTCCGGTATCCACGGTCAGATCTATCGGGTCGGGCAGGGG
GATTCCGGCAAGCGTCTGACCCGCTATCACGTCAGCCTCGTTCCGCGTCTGGCCTACCTGGGTCATCGGATCAATCAGCG
AATCTTCCAACATCAAAGCGTGCCGCAGATCGTGACGCAGATCCTCAAGGATCACGCGATCCTACGCGATGCCTTCGCGT
TTCGCCTCGGCAGCGATTACCCGCCCCGTGAATATTGTGTGCAGTACGCCGAAAGCGATTTGGCGTTCATCCAGCGCCTG
TGTGCCGAAGTCGGTATTCATTTTCACTTTCAGCACAGCCCGGACGGACATCTGTTGGTGTTCGGCGACGATCAGACGGT
ATTCCCGCGTCTGACCGAGCCGACGCTGTACCTGCCGGGAAGCGGCATGGCTGCATCGGCGCCGGCGATCAAGCGTTTCA
CCGTACGCGTTGAGACCCGCACCAGCGTGGTCACCCGGCGTGATTACGACTTCACCAAGCCCCGGCTGGCGCTGCAAAGT
CGCGCCGAAAGCGAGCAGCGCCCGGTGCTGGAGGATTACCACTTTCCCGGCCAGTTCACCGAGCGCGAAACCGGCAAGCA
ACTGGCCCAGCGCACCCTTGAACGACATGTCGCCGACTACCGTCAGGCCGAGGGCCGCAGCGATCAATCCGCTCTCGTCA
GCGGACATTTCCTGCAACTGACCGAGCATCCGCGCCAGGATCTGAATGACCTCTGGCTGCTGACTGCGATCGAGCACCGT
GGCCGACAGCCGCAAGTGCTGGAGGAATCGGTGACCAGCGACGGTGATGACTTCCAGGGCTACCGAAATACCTTTTTCGC
CACGCCGTGGGACGTGTTCTTCCGCCCGCCGCTGGGCCCGGAAAAACCACGGATGCTCGGCTATCAACCGGCCGTGGTCA
CCGGCCCGCAAGACAGTGAAATCCATTGCGACGAGTACGGTCGGGTCAAGGTGCAACTGGCCTGGGATCGCGACGGTGAA
CTCAACGAGCATTCCAGTTGCTGGCTGCGGGTCGCCAGCGGCTGGGCCCATGATCGTTATGGCAGCGTGCTGATCCCCCG
AGTCGGCATGGAAGTGCTGGTGGGTTTCATCGATTCCGACGCCGACAAACCGCTGGTCATGGGTTGCCTGCCGAACGCCG
CCACGCCGGTTCCGCTGGAGCTGCCGGCCGACAAGACCCGCAGCATTTTCCGCAGCCAGAGTAGTCCCGGCGGTGGGGGC
TACAACGAATTGCGTATCGAAGATCGCAAAGGTGCCGAGGAAATCTACCTGCGCGCCCAGCGAAACTGGACCCAGCACGT
ATTGAACGATCAGCAGGTGCAGGTGGATAACCAGCGCAGCGTTGTCGTCACTGGTCTCGCTAAACACGAACTGAAGGCCG
ATGAGCAGCACATCACCCACGGCCAGCGCCAGACTGAAGTGAAGCAGGACGACCACCTCACGGTGACCGGCGACCGGCAC
ATTCGCGTGAGCAATCAGGCGATCAACGCCAGTGCTCAATTCCACGTCAGCGCCGGCCAGCAGGTGGTGATCGACGGCGG
GGCGAGCGCAACGATTCAGGCGGGCGGGCAGTGGATCAACATCGGCCCCGGCGGGATCTTCAGCAGCGTGCCGATTGTGG
TGGGTGGTGCGCCGATGGCGGCGATAAGTGCGGCGCCGACGGTGCCGGGGTTGCCGGAAAAACTGGCGGCAGCCCCGGCT
GCGATTCTGACTGCTGCGCAAATCATGAGCCTGAAAGGTGATGCGCCTTTCTGTGAAGAATGCGAGCGCTGCAAAGGTGG
TGTCTGTGCAGCCTGA

Upstream 100 bases:

>100_bases
GAAGTTTCAAGTAGGGGAAATCTGATTTTTCGGTCACCCCGTCTTCACCCCTCGCGCCTCATGCAGAATCGCCCGCCCTC
AATCTGCAGAGAGACATCGG

Downstream 100 bases:

>100_bases
TCAATGGTTGAAGGATGTGCCGCTGAAGCCGTCGGAGCAGTTGTTCGCGATTTTCAGTAGCGCCAGTGCGGCGGAGCCGC
TGAAGGCCTGGCCGCTGAAA

Product: Rhs element Vgr protein

Products: NA

Alternate protein names: Type VI Secretion System Vgr Family Protein; VgrG Protein; Rhs-Family Protein; Rhs Family Protein; Rhs Element Vgr Family Protein; Rhs Accessory Genetic Element; RHS Accessory Genetic Element; VgrG-Like Protein; Vgr Protein; VgrG Family T6SS G; Rhs Protein; Rhs Element Vgr Family; Rhs Element Vgr ProteinGp5-Like; Rhs/Vgr-Family Protein; Type VI Secretion System VgrG Family Protein; Rhs Element Vgr Protein Subfamily; Vgr Family Type VI Secretion System; Rhs Element Protein; Type VI Secretion System Effector Protein VgrS; Vrg Family Protein; VrgG Protein

Number of amino acids: Translated: 671; Mature: 671

Protein sequence:

>671_residues
MFAPANQPRFTLTVEGAQFDLKVLEFTGKEAISQPFRFDLELVSERPDLDLESLLHCQAFLSFDEEGSGIHGQIYRVGQG
DSGKRLTRYHVSLVPRLAYLGHRINQRIFQHQSVPQIVTQILKDHAILRDAFAFRLGSDYPPREYCVQYAESDLAFIQRL
CAEVGIHFHFQHSPDGHLLVFGDDQTVFPRLTEPTLYLPGSGMAASAPAIKRFTVRVETRTSVVTRRDYDFTKPRLALQS
RAESEQRPVLEDYHFPGQFTERETGKQLAQRTLERHVADYRQAEGRSDQSALVSGHFLQLTEHPRQDLNDLWLLTAIEHR
GRQPQVLEESVTSDGDDFQGYRNTFFATPWDVFFRPPLGPEKPRMLGYQPAVVTGPQDSEIHCDEYGRVKVQLAWDRDGE
LNEHSSCWLRVASGWAHDRYGSVLIPRVGMEVLVGFIDSDADKPLVMGCLPNAATPVPLELPADKTRSIFRSQSSPGGGG
YNELRIEDRKGAEEIYLRAQRNWTQHVLNDQQVQVDNQRSVVVTGLAKHELKADEQHITHGQRQTEVKQDDHLTVTGDRH
IRVSNQAINASAQFHVSAGQQVVIDGGASATIQAGGQWINIGPGGIFSSVPIVVGGAPMAAISAAPTVPGLPEKLAAAPA
AILTAAQIMSLKGDAPFCEECERCKGGVCAA

Sequences:

>Translated_671_residues
MFAPANQPRFTLTVEGAQFDLKVLEFTGKEAISQPFRFDLELVSERPDLDLESLLHCQAFLSFDEEGSGIHGQIYRVGQG
DSGKRLTRYHVSLVPRLAYLGHRINQRIFQHQSVPQIVTQILKDHAILRDAFAFRLGSDYPPREYCVQYAESDLAFIQRL
CAEVGIHFHFQHSPDGHLLVFGDDQTVFPRLTEPTLYLPGSGMAASAPAIKRFTVRVETRTSVVTRRDYDFTKPRLALQS
RAESEQRPVLEDYHFPGQFTERETGKQLAQRTLERHVADYRQAEGRSDQSALVSGHFLQLTEHPRQDLNDLWLLTAIEHR
GRQPQVLEESVTSDGDDFQGYRNTFFATPWDVFFRPPLGPEKPRMLGYQPAVVTGPQDSEIHCDEYGRVKVQLAWDRDGE
LNEHSSCWLRVASGWAHDRYGSVLIPRVGMEVLVGFIDSDADKPLVMGCLPNAATPVPLELPADKTRSIFRSQSSPGGGG
YNELRIEDRKGAEEIYLRAQRNWTQHVLNDQQVQVDNQRSVVVTGLAKHELKADEQHITHGQRQTEVKQDDHLTVTGDRH
IRVSNQAINASAQFHVSAGQQVVIDGGASATIQAGGQWINIGPGGIFSSVPIVVGGAPMAAISAAPTVPGLPEKLAAAPA
AILTAAQIMSLKGDAPFCEECERCKGGVCAA
>Mature_671_residues
MFAPANQPRFTLTVEGAQFDLKVLEFTGKEAISQPFRFDLELVSERPDLDLESLLHCQAFLSFDEEGSGIHGQIYRVGQG
DSGKRLTRYHVSLVPRLAYLGHRINQRIFQHQSVPQIVTQILKDHAILRDAFAFRLGSDYPPREYCVQYAESDLAFIQRL
CAEVGIHFHFQHSPDGHLLVFGDDQTVFPRLTEPTLYLPGSGMAASAPAIKRFTVRVETRTSVVTRRDYDFTKPRLALQS
RAESEQRPVLEDYHFPGQFTERETGKQLAQRTLERHVADYRQAEGRSDQSALVSGHFLQLTEHPRQDLNDLWLLTAIEHR
GRQPQVLEESVTSDGDDFQGYRNTFFATPWDVFFRPPLGPEKPRMLGYQPAVVTGPQDSEIHCDEYGRVKVQLAWDRDGE
LNEHSSCWLRVASGWAHDRYGSVLIPRVGMEVLVGFIDSDADKPLVMGCLPNAATPVPLELPADKTRSIFRSQSSPGGGG
YNELRIEDRKGAEEIYLRAQRNWTQHVLNDQQVQVDNQRSVVVTGLAKHELKADEQHITHGQRQTEVKQDDHLTVTGDRH
IRVSNQAINASAQFHVSAGQQVVIDGGASATIQAGGQWINIGPGGIFSSVPIVVGGAPMAAISAAPTVPGLPEKLAAAPA
AILTAAQIMSLKGDAPFCEECERCKGGVCAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 74547; Mature: 74547

Theoretical pI: Translated: 6.21; Mature: 6.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFAPANQPRFTLTVEGAQFDLKVLEFTGKEAISQPFRFDLELVSERPDLDLESLLHCQAF
CCCCCCCCEEEEEECCCEEEEEEEEECCHHHHCCCCEECHHHHCCCCCCCHHHHHHHHHH
LSFDEEGSGIHGQIYRVGQGDSGKRLTRYHVSLVPRLAYLGHRINQRIFQHQSVPQIVTQ
HCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
ILKDHAILRDAFAFRLGSDYPPREYCVQYAESDLAFIQRLCAEVGIHFHFQHSPDGHLLV
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCEEEE
FGDDQTVFPRLTEPTLYLPGSGMAASAPAIKRFTVRVETRTSVVTRRDYDFTKPRLALQS
ECCCCEECCCCCCCEEEECCCCCCCCCCCEEEEEEEEECCCEEEEECCCCCCCHHHHHHH
RAESEQRPVLEDYHFPGQFTERETGKQLAQRTLERHVADYRQAEGRSDQSALVSGHFLQL
HCCHHCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCEEEEE
TEHPRQDLNDLWLLTAIEHRGRQPQVLEESVTSDGDDFQGYRNTFFATPWDVFFRPPLGP
HHCCHHHHHHHEEHHHHHHCCCCCHHHHHHHCCCCCCCCCHHHCEECCCHHHEECCCCCC
EKPRMLGYQPAVVTGPQDSEIHCDEYGRVKVQLAWDRDGELNEHSSCWLRVASGWAHDRY
CCCCEECCCCEEEECCCCCCEECCCCCEEEEEEEECCCCCCCCCCCEEEEEECCCCCCCC
GSVLIPRVGMEVLVGFIDSDADKPLVMGCLPNAATPVPLELPADKTRSIFRSQSSPGGGG
CCEEECHHCHHHHHHHHCCCCCCCEEEEECCCCCCCCEEECCCHHHHHHHHCCCCCCCCC
YNELRIEDRKGAEEIYLRAQRNWTQHVLNDQQVQVDNQRSVVVTGLAKHELKADEQHITH
CCEEEEECCCCCCCEEEEHHCCHHHHHCCCCEEEECCCCEEEEEECHHHHHCCCHHHHHC
GQRQTEVKQDDHLTVTGDRHIRVSNQAINASAQFHVSAGQQVVIDGGASATIQAGGQWIN
CCHHCCCCCCCCEEEECCCEEEEECCEECCCEEEEECCCCEEEEECCCCEEEECCCEEEE
IGPGGIFSSVPIVVGGAPMAAISAAPTVPGLPEKLAAAPAAILTAAQIMSLKGDAPFCEE
ECCCCHHCCCCEEECCCCHHHHCCCCCCCCCCHHHHHCHHHHHHHHHHHHCCCCCCHHHH
CERCKGGVCAA
HHHHCCCCCCC
>Mature Secondary Structure
MFAPANQPRFTLTVEGAQFDLKVLEFTGKEAISQPFRFDLELVSERPDLDLESLLHCQAF
CCCCCCCCEEEEEECCCEEEEEEEEECCHHHHCCCCEECHHHHCCCCCCCHHHHHHHHHH
LSFDEEGSGIHGQIYRVGQGDSGKRLTRYHVSLVPRLAYLGHRINQRIFQHQSVPQIVTQ
HCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
ILKDHAILRDAFAFRLGSDYPPREYCVQYAESDLAFIQRLCAEVGIHFHFQHSPDGHLLV
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCEEEE
FGDDQTVFPRLTEPTLYLPGSGMAASAPAIKRFTVRVETRTSVVTRRDYDFTKPRLALQS
ECCCCEECCCCCCCEEEECCCCCCCCCCCEEEEEEEEECCCEEEEECCCCCCCHHHHHHH
RAESEQRPVLEDYHFPGQFTERETGKQLAQRTLERHVADYRQAEGRSDQSALVSGHFLQL
HCCHHCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCEEEEE
TEHPRQDLNDLWLLTAIEHRGRQPQVLEESVTSDGDDFQGYRNTFFATPWDVFFRPPLGP
HHCCHHHHHHHEEHHHHHHCCCCCHHHHHHHCCCCCCCCCHHHCEECCCHHHEECCCCCC
EKPRMLGYQPAVVTGPQDSEIHCDEYGRVKVQLAWDRDGELNEHSSCWLRVASGWAHDRY
CCCCEECCCCEEEECCCCCCEECCCCCEEEEEEEECCCCCCCCCCCEEEEEECCCCCCCC
GSVLIPRVGMEVLVGFIDSDADKPLVMGCLPNAATPVPLELPADKTRSIFRSQSSPGGGG
CCEEECHHCHHHHHHHHCCCCCCCEEEEECCCCCCCCEEECCCHHHHHHHHCCCCCCCCC
YNELRIEDRKGAEEIYLRAQRNWTQHVLNDQQVQVDNQRSVVVTGLAKHELKADEQHITH
CCEEEEECCCCCCCEEEEHHCCHHHHHCCCCEEEECCCCEEEEEECHHHHHCCCHHHHHC
GQRQTEVKQDDHLTVTGDRHIRVSNQAINASAQFHVSAGQQVVIDGGASATIQAGGQWIN
CCHHCCCCCCCCEEEECCCEEEEECCEECCCEEEEECCCCEEEEECCCCEEEECCCEEEE
IGPGGIFSSVPIVVGGAPMAAISAAPTVPGLPEKLAAAPAAILTAAQIMSLKGDAPFCEE
ECCCCHHCCCCEEECCCCHHHHCCCCCCCCCCHHHHHCHHHHHHHHHHHHCCCCCCHHHH
CERCKGGVCAA
HHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA