Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
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Accession | NC_007492 |
Length | 6,438,405 |
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The map label for this gene is putP [H]
Identifier: 77456681
GI number: 77456681
Start: 519009
End: 520493
Strand: Direct
Name: putP [H]
Synonym: Pfl01_0453
Alternate gene names: 77456681
Gene position: 519009-520493 (Clockwise)
Preceding gene: 77456678
Following gene: 77456682
Centisome position: 8.06
GC content: 60.27
Gene sequence:
>1485_bases ATGAGCGCAAGCAATCCAACCCTGATCACGTTCGTGATCTACATCGCAGCAATGGTGCTGATCGGCTTCATGGCCTATCG CTCCACCAATAACCTTTCTGACTATATTCTGGGCGGCCGCAGCCTGGGCAGCGTGGTGACGGCATTGTCCGCCGGCGCTT CCGACATGAGCGGCTGGTTGCTGATGGGCCTGCCGGGCGCCATCTACATGTCTGGCCTGTCCGAAAGCTGGATCGCCATC GGCCTGATCGTCGGTGCCTACCTGAACTGGCTGTTCGTCGCCGGTCGTCTGCGTGTTCAGACCGAGCACAACGGCGATGC ACTGACCCTGCCGGACTACTTCTCCAGCCGTTTCGAAGACAAGAGCGGTCTGCTGCGCATCATTTCGGCAGTGGTGATTC TGGTGTTCTTCACCATCTACTGCGCTTCCGGCATCGTGGCCGGTGCCCGTCTGTTCGAAAGCACCTTCGGCATGTCCTAC GAGACAGCGCTGTGGGCCGGTGCTGCGGCGACGATTGCCTACACCTTCGTCGGCGGTTTCCTCGCGGTGAGCTGGACCGA CACCGTACAAGCCACCCTGATGATCTTCGCCCTGCTGCTGACGCCGATCATCGTGCTGCTGGCTACCGGCGGTGTCGACA CCACGTTCCTGGCGATCGAAGCACAGGACCCGAGCAACTTCGACATGCTCAAGGGCACCACTTTCATCGGCATCATCTCG CTGATGGGTTGGGGTCTGGGCTACTTCGGTCAGCCGCACATCCTGGCGCGCTTCATGGCCGCTGATTCGGTGAAATCCAT CGCCAACGCCCGTCGCATCTCCATGACCTGGATGATCCTGTGCCTGGGCGGTACCGTGGCCGTGGGCTTCTTCGGTATCG CTTACTTCTCGGCGCACCCGGAGGTGGCAGGTCCAGTGACCGAAAACCACGAGCGTGTGTTCATCGAACTGGCGAAAATC CTGTTCAACCCGTGGATTGCAGGCGTGCTGTTGTCGGCTATTCTCGCGGCGGTGATGAGCACCCTGAGCTGCCAGTTGCT GGTGTGCTCGAGCGCCCTGACCGAAGACTTCTACAAGGCTTTCCTGCGTAAATCCGCTTCGCAAGTCGAACTGGTATGGG TCGGTCGCGCCATGGTGCTGCTGGTTGCACTGATCGCCATCGCGATGGCCGCCAACCCGGACAACCGTGTGCTGGGTCTG GTGTCCTACGCCTGGGCCGGTTTCGGTGCAGCCTTCGGTCCGGTCGTGCTGATCTCGGTGATCTGGAAGAAAATGACCCG TGACGGCGCACTGGCCGGCATCCTGGTCGGCGCGATCACCGTGATCGTGTGGAAGCATTTCGAACTGCTGGGTCTGTACG AAATCATTCCGGGCTTCATCTTCGCCAGCCTGGCGATCTACTTCGTCAGCCTGATGGGCCAGCCGAGCGCCGGTATGGTT CAGCGTTTTGAAGCGGCCGAGAAGGATTTCCATCTGAACAAGTGA
Upstream 100 bases:
>100_bases GGTCATAAATGCGCGGCCGTGCGATTCGTCTGTCAGGCGTCAGTCTGCAAACGGTGCAACCGCCGCCGCTACATAAAAAC AAAGCCAGGGCACGTACGTA
Downstream 100 bases:
>100_bases TGGGAATGAGCTGAGACTCACCAGAAAACGGCCCGCGTCCTAAAGGAAGCGGGCCGTTTTTTATTGCCTGCGATTTTTCT GAAGGAAAAGTCTGTAGTCG
Product: Sodium/proline symporter
Products: NA
Alternate protein names: Proline permease; Propionate transporter [H]
Number of amino acids: Translated: 494; Mature: 493
Protein sequence:
>494_residues MSASNPTLITFVIYIAAMVLIGFMAYRSTNNLSDYILGGRSLGSVVTALSAGASDMSGWLLMGLPGAIYMSGLSESWIAI GLIVGAYLNWLFVAGRLRVQTEHNGDALTLPDYFSSRFEDKSGLLRIISAVVILVFFTIYCASGIVAGARLFESTFGMSY ETALWAGAAATIAYTFVGGFLAVSWTDTVQATLMIFALLLTPIIVLLATGGVDTTFLAIEAQDPSNFDMLKGTTFIGIIS LMGWGLGYFGQPHILARFMAADSVKSIANARRISMTWMILCLGGTVAVGFFGIAYFSAHPEVAGPVTENHERVFIELAKI LFNPWIAGVLLSAILAAVMSTLSCQLLVCSSALTEDFYKAFLRKSASQVELVWVGRAMVLLVALIAIAMAANPDNRVLGL VSYAWAGFGAAFGPVVLISVIWKKMTRDGALAGILVGAITVIVWKHFELLGLYEIIPGFIFASLAIYFVSLMGQPSAGMV QRFEAAEKDFHLNK
Sequences:
>Translated_494_residues MSASNPTLITFVIYIAAMVLIGFMAYRSTNNLSDYILGGRSLGSVVTALSAGASDMSGWLLMGLPGAIYMSGLSESWIAI GLIVGAYLNWLFVAGRLRVQTEHNGDALTLPDYFSSRFEDKSGLLRIISAVVILVFFTIYCASGIVAGARLFESTFGMSY ETALWAGAAATIAYTFVGGFLAVSWTDTVQATLMIFALLLTPIIVLLATGGVDTTFLAIEAQDPSNFDMLKGTTFIGIIS LMGWGLGYFGQPHILARFMAADSVKSIANARRISMTWMILCLGGTVAVGFFGIAYFSAHPEVAGPVTENHERVFIELAKI LFNPWIAGVLLSAILAAVMSTLSCQLLVCSSALTEDFYKAFLRKSASQVELVWVGRAMVLLVALIAIAMAANPDNRVLGL VSYAWAGFGAAFGPVVLISVIWKKMTRDGALAGILVGAITVIVWKHFELLGLYEIIPGFIFASLAIYFVSLMGQPSAGMV QRFEAAEKDFHLNK >Mature_493_residues SASNPTLITFVIYIAAMVLIGFMAYRSTNNLSDYILGGRSLGSVVTALSAGASDMSGWLLMGLPGAIYMSGLSESWIAIG LIVGAYLNWLFVAGRLRVQTEHNGDALTLPDYFSSRFEDKSGLLRIISAVVILVFFTIYCASGIVAGARLFESTFGMSYE TALWAGAAATIAYTFVGGFLAVSWTDTVQATLMIFALLLTPIIVLLATGGVDTTFLAIEAQDPSNFDMLKGTTFIGIISL MGWGLGYFGQPHILARFMAADSVKSIANARRISMTWMILCLGGTVAVGFFGIAYFSAHPEVAGPVTENHERVFIELAKIL FNPWIAGVLLSAILAAVMSTLSCQLLVCSSALTEDFYKAFLRKSASQVELVWVGRAMVLLVALIAIAMAANPDNRVLGLV SYAWAGFGAAFGPVVLISVIWKKMTRDGALAGILVGAITVIVWKHFELLGLYEIIPGFIFASLAIYFVSLMGQPSAGMVQ RFEAAEKDFHLNK
Specific function: Catalyzes the sodium-dependent uptake of extracellular L-proline. This protein is also capable of using lithium as the transport cation. Also catalyzes the uptake of propionate [H]
COG id: COG0591
COG function: function code ER; Na+/proline symporter
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family [H]
Homologues:
Organism=Homo sapiens, GI310128183, Length=503, Percent_Identity=46.7196819085487, Blast_Score=436, Evalue=1e-122, Organism=Homo sapiens, GI110835708, Length=485, Percent_Identity=24.9484536082474, Blast_Score=73, Evalue=5e-13, Organism=Escherichia coli, GI1787251, Length=492, Percent_Identity=75.8130081300813, Blast_Score=736, Evalue=0.0, Organism=Escherichia coli, GI1790503, Length=450, Percent_Identity=27.1111111111111, Blast_Score=126, Evalue=3e-30, Organism=Escherichia coli, GI87082237, Length=445, Percent_Identity=26.9662921348315, Blast_Score=114, Evalue=1e-26, Organism=Escherichia coli, GI1790113, Length=462, Percent_Identity=23.5930735930736, Blast_Score=63, Evalue=4e-11, Organism=Caenorhabditis elegans, GI115533094, Length=377, Percent_Identity=24.9336870026525, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI221459584, Length=392, Percent_Identity=24.234693877551, Blast_Score=91, Evalue=1e-18, Organism=Drosophila melanogaster, GI24645928, Length=384, Percent_Identity=25.5208333333333, Blast_Score=89, Evalue=5e-18, Organism=Drosophila melanogaster, GI221459588, Length=379, Percent_Identity=24.802110817942, Blast_Score=76, Evalue=5e-14, Organism=Drosophila melanogaster, GI24651741, Length=459, Percent_Identity=22.8758169934641, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI24640370, Length=355, Percent_Identity=22.5352112676056, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI221459586, Length=381, Percent_Identity=22.5721784776903, Blast_Score=67, Evalue=3e-11, Organism=Drosophila melanogaster, GI221459582, Length=375, Percent_Identity=25.0666666666667, Blast_Score=65, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011851 - InterPro: IPR001734 - InterPro: IPR018212 - InterPro: IPR019900 [H]
Pfam domain/function: PF00474 SSF [H]
EC number: NA
Molecular weight: Translated: 53030; Mature: 52899
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: PS00456 NA_SOLUT_SYMP_1 ; PS00457 NA_SOLUT_SYMP_2 ; PS50283 NA_SOLUT_SYMP_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSASNPTLITFVIYIAAMVLIGFMAYRSTNNLSDYILGGRSLGSVVTALSAGASDMSGWL CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHHCCCCCCCCEE LMGLPGAIYMSGLSESWIAIGLIVGAYLNWLFVAGRLRVQTEHNGDALTLPDYFSSRFED EECCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCEEECCHHHHHHCCC KSGLLRIISAVVILVFFTIYCASGIVAGARLFESTFGMSYETALWAGAAATIAYTFVGGF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH LAVSWTDTVQATLMIFALLLTPIIVLLATGGVDTTFLAIEAQDPSNFDMLKGTTFIGIIS HEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHCCHHHHHHHH LMGWGLGYFGQPHILARFMAADSVKSIANARRISMTWMILCLGGTVAVGFFGIAYFSAHP HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC EVAGPVTENHERVFIELAKILFNPWIAGVLLSAILAAVMSTLSCQLLVCSSALTEDFYKA CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FLRKSASQVELVWVGRAMVLLVALIAIAMAANPDNRVLGLVSYAWAGFGAAFGPVVLISV HHHCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHCHHHHHHHHHHH IWKKMTRDGALAGILVGAITVIVWKHFELLGLYEIIPGFIFASLAIYFVSLMGQPSAGMV HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH QRFEAAEKDFHLNK HHHHHHHCCCCCCC >Mature Secondary Structure SASNPTLITFVIYIAAMVLIGFMAYRSTNNLSDYILGGRSLGSVVTALSAGASDMSGWL CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHHCCCCCCCCEE LMGLPGAIYMSGLSESWIAIGLIVGAYLNWLFVAGRLRVQTEHNGDALTLPDYFSSRFED EECCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCEEECCHHHHHHCCC KSGLLRIISAVVILVFFTIYCASGIVAGARLFESTFGMSYETALWAGAAATIAYTFVGGF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH LAVSWTDTVQATLMIFALLLTPIIVLLATGGVDTTFLAIEAQDPSNFDMLKGTTFIGIIS HEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHCCHHHHHHHH LMGWGLGYFGQPHILARFMAADSVKSIANARRISMTWMILCLGGTVAVGFFGIAYFSAHP HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC EVAGPVTENHERVFIELAKILFNPWIAGVLLSAILAAVMSTLSCQLLVCSSALTEDFYKA CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FLRKSASQVELVWVGRAMVLLVALIAIAMAANPDNRVLGLVSYAWAGFGAAFGPVVLISV HHHCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHCHHHHHHHHHHH IWKKMTRDGALAGILVGAITVIVWKHFELLGLYEIIPGFIFASLAIYFVSLMGQPSAGMV HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH QRFEAAEKDFHLNK HHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 3302614; 8905232; 9278503; 1400239; 3325781; 3053687; 3053649; 1567896; 8119910 [H]