Click here to switch to the map view.

The map label for this gene is 77454814

Identifier: 77454814

GI number: 77454814

Start: 224614

End: 225141

Strand: Direct

Name: 77454814

Synonym: pREL1_0247

Alternate gene names: NA

Gene position: 224614-225141 (Clockwise)

Preceding gene: 77454813

Following gene: 77454821

Centisome position: 82.71

GC content: 63.64

Gene sequence:

>528_bases
ATGATGTACCCGCTCGTGAAGGAGCTCGCCGTCGACGGAATCCCCGTCGCGGTCTCGTGCCGGGTCTTGAAGCTCTCCCG
CCAACCGTACTATCGGTGGCTGCGTGATGCGGTCACCGAGGCAGATCTGACCTGGGCATATCGGGCGAACGCGTTGTTCG
ATGCCCACCGGGACGACCCTGAGTTCGGGTACCGGTTTCTCGCCGACGAAGCCGAGGCCGCGGGTCAGGTCATGGCGGCA
CGGACGGCGTGGCGGATCTGCTCGGATAACACCTGGTGGTCGAGGTTCGGCAAGAAGCCTCGCCGACTGAAGTCGGTGCG
TTCCGGGCCGGCCGTGCACGAGGACCTGGTGCAACGCGAGTTCACCGCGCAGCGTCCGAACCGATTGTGGCTCACCGACA
TCACCGAGCACCCCACCGCTTGGATTCCAGCAATCGTCGCAACACTCGTAATTACGAGACTTCCAGTAAAGCACTCAGGC
GCTCGGCAGGGGTGTCCCAGTCGAGCGATTTCCGGGGTCGGTCGTTAA

Upstream 100 bases:

>100_bases
GAACCGGGAGTTGAAGAAACGAGTTCGGCTGCTGGAGCAGGAGAATGAGGTGCTGCGGCGAGCTGCGGCGTATTCTGTCG
CAGGCGAATCTGCCGGGAAA

Downstream 100 bases:

>100_bases
GCTCCTCCGCGACGGCCAAGAGTTTGTCGACGCTATGCGCTTCCAGGTCGGTACCGCGCGGGAAGTATTGGCGGAGAAGC
CCGTTGGTGTTCTCGTTGGA

Product: putative transposase

Products: NA

Alternate protein names: Integrase Catalytic Region; Integrase Catalytic Subunit; Integrase; Transposase Subunit; Integrase Catalytic Domain-Containing Protein; Transposase For Insertion Sequence; Transposase N-Terminal; ISMsm7 Transposase OrfB

Number of amino acids: Translated: 175; Mature: 175

Protein sequence:

>175_residues
MMYPLVKELAVDGIPVAVSCRVLKLSRQPYYRWLRDAVTEADLTWAYRANALFDAHRDDPEFGYRFLADEAEAAGQVMAA
RTAWRICSDNTWWSRFGKKPRRLKSVRSGPAVHEDLVQREFTAQRPNRLWLTDITEHPTAWIPAIVATLVITRLPVKHSG
ARQGCPSRAISGVGR

Sequences:

>Translated_175_residues
MMYPLVKELAVDGIPVAVSCRVLKLSRQPYYRWLRDAVTEADLTWAYRANALFDAHRDDPEFGYRFLADEAEAAGQVMAA
RTAWRICSDNTWWSRFGKKPRRLKSVRSGPAVHEDLVQREFTAQRPNRLWLTDITEHPTAWIPAIVATLVITRLPVKHSG
ARQGCPSRAISGVGR
>Mature_175_residues
MMYPLVKELAVDGIPVAVSCRVLKLSRQPYYRWLRDAVTEADLTWAYRANALFDAHRDDPEFGYRFLADEAEAAGQVMAA
RTAWRICSDNTWWSRFGKKPRRLKSVRSGPAVHEDLVQREFTAQRPNRLWLTDITEHPTAWIPAIVATLVITRLPVKHSG
ARQGCPSRAISGVGR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19889; Mature: 19889

Theoretical pI: Translated: 10.20; Mature: 10.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMYPLVKELAVDGIPVAVSCRVLKLSRQPYYRWLRDAVTEADLTWAYRANALFDAHRDDP
CCCHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCH
EFGYRFLADEAEAAGQVMAARTAWRICSDNTWWSRFGKKPRRLKSVRSGPAVHEDLVQRE
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHCCCHHHHHHHHHH
FTAQRPNRLWLTDITEHPTAWIPAIVATLVITRLPVKHSGARQGCPSRAISGVGR
HHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCC
>Mature Secondary Structure
MMYPLVKELAVDGIPVAVSCRVLKLSRQPYYRWLRDAVTEADLTWAYRANALFDAHRDDP
CCCHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCH
EFGYRFLADEAEAAGQVMAARTAWRICSDNTWWSRFGKKPRRLKSVRSGPAVHEDLVQRE
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHCCCHHHHHHHHHH
FTAQRPNRLWLTDITEHPTAWIPAIVATLVITRLPVKHSGARQGCPSRAISGVGR
HHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA