Definition | Rhodococcus erythropolis PR4 plasmid pREL1, complete sequence. |
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Accession | NC_007491 |
Length | 271,577 |
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The map label for this gene is 77454813
Identifier: 77454813
GI number: 77454813
Start: 224301
End: 224561
Strand: Direct
Name: 77454813
Synonym: pREL1_0246
Alternate gene names: NA
Gene position: 224301-224561 (Clockwise)
Preceding gene: 77454812
Following gene: 77454814
Centisome position: 82.59
GC content: 60.54
Gene sequence:
>261_bases GTGGCCTGGAAGGATGCAGCTATGCCGAAGCCTTACCCACAGGAGTTTCGCGAGGATGTAGTCCGGGTGGCCCGCGGCCG GGAACCGGGTGTGACGATCGATCAGGTTGCCGCGGATTTCGGGGTGCACCCGATGACACTGTCGAAGTGGATGCGACGAG CCGATGTCGATGACGGTACGAAAACCCGGGCTGAGCAGCATGAGTATGGCCGAGAACCGGGAGTTGAAGAAACGAGTTCG GCTGCTGGAGCAGGAGAATGA
Upstream 100 bases:
>100_bases TGGGAACGGAGAAAGTCACGCTACCGCCAACTGACCCATAACTTTATCCGAATGGGTCTGCTGCACGGATAGGTGACATC TGATCTGGCTTACCTTCGGG
Downstream 100 bases:
>100_bases GGTGCTGCGGCGAGCTGCGGCGTATTCTGTCGCAGGCGAATCTGCCGGGAAAATGATGTACCCGCTCGTGAAGGAGCTCG CCGTCGACGGAATCCCCGTC
Product: putative transposase
Products: NA
Alternate protein names: Transposase Subunit; Transposase IS3/IS
Number of amino acids: Translated: 86; Mature: 85
Protein sequence:
>86_residues MAWKDAAMPKPYPQEFREDVVRVARGREPGVTIDQVAADFGVHPMTLSKWMRRADVDDGTKTRAEQHEYGREPGVEETSS AAGAGE
Sequences:
>Translated_86_residues MAWKDAAMPKPYPQEFREDVVRVARGREPGVTIDQVAADFGVHPMTLSKWMRRADVDDGTKTRAEQHEYGREPGVEETSS AAGAGE >Mature_85_residues AWKDAAMPKPYPQEFREDVVRVARGREPGVTIDQVAADFGVHPMTLSKWMRRADVDDGTKTRAEQHEYGREPGVEETSSA AGAGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9532; Mature: 9400
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAWKDAAMPKPYPQEFREDVVRVARGREPGVTIDQVAADFGVHPMTLSKWMRRADVDDGT CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCHHHHHHHHHCCCCCCC KTRAEQHEYGREPGVEETSSAAGAGE HHHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure AWKDAAMPKPYPQEFREDVVRVARGREPGVTIDQVAADFGVHPMTLSKWMRRADVDDGT CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCHHHHHHHHHCCCCCCC KTRAEQHEYGREPGVEETSSAAGAGE HHHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA