| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
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The map label for this gene is pyrE [H]
Identifier: 75674352
GI number: 75674352
Start: 178339
End: 178902
Strand: Direct
Name: pyrE [H]
Synonym: Nwi_0153
Alternate gene names: 75674352
Gene position: 178339-178902 (Clockwise)
Preceding gene: 75674351
Following gene: 75674355
Centisome position: 5.24
GC content: 57.27
Gene sequence:
>564_bases ATGCCTGAAGATATAAAAGTCCGTCAAAGGGCTTTCGAGATCATCAAGACCAGATCATTCGGCCGCGGCAACATCAAACT GGCCTCCGGAAAAACCAGCACGTTCTACTTCGATATGAAACCGACGATGCTGGCTCCTGAAGGGGCCCATGTCCTGTCCG AGCTCATTCTGGCGCGGCTTGCCGGCCAAGGCATCGACTATATCGGCGGGCTGGAGATGGGAGCGGTGCCTCTGATCTCG ACCGTCAGCCTTCTCAGCCACATCAGGAATGAACCGCTTCCAGGCTTCTTCGTTCGCAAGGACGTCAAGAAGCACGGAAC CCGGAAACTCATCGAGGGTCTCCCCGTCGATGATCTTCGCGGCAAGAGGGTCGTCATCCTGGAGGATGTCACGACGAGCG GCGCGTCCGCCATGATCGCGGTCTCGGCCGCGCAGGCCGAGGGCGCGGAAGTCGTGATGGTTCTGTCGATCGTCGACAGG GGCGAGGGAGCCATGGCTCTCTATAAAGAGAAAAGCATTGAATTCGATTCGCTGTTCAAGGCGGAAGAATTCCTGGCTTC CTAA
Upstream 100 bases:
>100_bases TCGTCTGGTTCGTTGTCACGACGACCGGTTGAGCGTATAGACCGGCAATCCTCCGTTCCGGCACGACAGTTTCAATTCAC ATCGACCGAGCCCGAAAGCC
Downstream 100 bases:
>100_bases CGCTCCTTCTGAAAGGCCGTCCGTCCGATAATCACCGGCTTGCGCCGTTGCACCAGCTTTCGCGACGGCCGCCATGATAG ACGCGGGCGAGGCCGCTCGC
Product: orotate phosphoribosyltransferase
Products: NA
Alternate protein names: OPRT; OPRTase [H]
Number of amino acids: Translated: 187; Mature: 186
Protein sequence:
>187_residues MPEDIKVRQRAFEIIKTRSFGRGNIKLASGKTSTFYFDMKPTMLAPEGAHVLSELILARLAGQGIDYIGGLEMGAVPLIS TVSLLSHIRNEPLPGFFVRKDVKKHGTRKLIEGLPVDDLRGKRVVILEDVTTSGASAMIAVSAAQAEGAEVVMVLSIVDR GEGAMALYKEKSIEFDSLFKAEEFLAS
Sequences:
>Translated_187_residues MPEDIKVRQRAFEIIKTRSFGRGNIKLASGKTSTFYFDMKPTMLAPEGAHVLSELILARLAGQGIDYIGGLEMGAVPLIS TVSLLSHIRNEPLPGFFVRKDVKKHGTRKLIEGLPVDDLRGKRVVILEDVTTSGASAMIAVSAAQAEGAEVVMVLSIVDR GEGAMALYKEKSIEFDSLFKAEEFLAS >Mature_186_residues PEDIKVRQRAFEIIKTRSFGRGNIKLASGKTSTFYFDMKPTMLAPEGAHVLSELILARLAGQGIDYIGGLEMGAVPLIST VSLLSHIRNEPLPGFFVRKDVKKHGTRKLIEGLPVDDLRGKRVVILEDVTTSGASAMIAVSAAQAEGAEVVMVLSIVDRG EGAMALYKEKSIEFDSLFKAEEFLAS
Specific function: Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) [H]
COG id: COG0461
COG function: function code F; Orotate phosphoribosyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purine/pyrimidine phosphoribosyltransferase family. PyrE subfamily [H]
Homologues:
Organism=Homo sapiens, GI4507835, Length=172, Percent_Identity=27.906976744186, Blast_Score=68, Evalue=6e-12, Organism=Caenorhabditis elegans, GI17508631, Length=178, Percent_Identity=31.4606741573034, Blast_Score=76, Evalue=8e-15, Organism=Caenorhabditis elegans, GI17554964, Length=178, Percent_Identity=29.2134831460674, Blast_Score=70, Evalue=8e-13, Organism=Drosophila melanogaster, GI17933654, Length=176, Percent_Identity=29.5454545454545, Blast_Score=72, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004467 - InterPro: IPR023031 - InterPro: IPR000836 [H]
Pfam domain/function: PF00156 Pribosyltran [H]
EC number: =2.4.2.10 [H]
Molecular weight: Translated: 20310; Mature: 20179
Theoretical pI: Translated: 7.77; Mature: 7.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPEDIKVRQRAFEIIKTRSFGRGNIKLASGKTSTFYFDMKPTMLAPEGAHVLSELILARL CCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCEEEEEECCCCEECCCHHHHHHHHHHHHH AGQGIDYIGGLEMGAVPLISTVSLLSHIRNEPLPGFFVRKDVKKHGTRKLIEGLPVDDLR HCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC GKRVVILEDVTTSGASAMIAVSAAQAEGAEVVMVLSIVDRGEGAMALYKEKSIEFDSLFK CCEEEEEECCCCCCCCEEEEEEECCCCCCEEEEEEEEECCCCCCEEEECCCCCCHHHHHH AEEFLAS HHHHHCC >Mature Secondary Structure PEDIKVRQRAFEIIKTRSFGRGNIKLASGKTSTFYFDMKPTMLAPEGAHVLSELILARL CCCHHHHHHHHHHHHHCCCCCCCEEEECCCCEEEEEECCCCEECCCHHHHHHHHHHHHH AGQGIDYIGGLEMGAVPLISTVSLLSHIRNEPLPGFFVRKDVKKHGTRKLIEGLPVDDLR HCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC GKRVVILEDVTTSGASAMIAVSAAQAEGAEVVMVLSIVDRGEGAMALYKEKSIEFDSLFK CCEEEEEECCCCCCCCEEEEEEECCCCCCEEEEEEEEECCCCCCEEEECCCCCCHHHHHH AEEFLAS HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12597275 [H]