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The map label for this gene is ynhG [H]

Identifier: 75674351

GI number: 75674351

Start: 177645

End: 178163

Strand: Direct

Name: ynhG [H]

Synonym: Nwi_0152

Alternate gene names: 75674351

Gene position: 177645-178163 (Clockwise)

Preceding gene: 75674350

Following gene: 75674352

Centisome position: 5.22

GC content: 67.44

Gene sequence:

>519_bases
ATGCTGACGCGGGTTGCGGCGGTGCTGGCCGCCATTTGGGGGGCGGGCTTGCTCGGGATCGGATCGGCCGAGGCGCGGCC
TGAGATGGTCGGCTATCAGGGCGGCTATGCGCCCGGCACCATCGTCGTGAAAACCAGCGAGCGCCGGCTGTATCTGATCA
TCGATTCGGACCGCGCTCTCCGATATCCCGTCGGAGTCGGCAGGGCCGGCAAGCAATGGAGCGGCGCCGCGCGCATCGAG
GGCAAATATCGCAACCCGGCATGGGCGCCGCCGGCGGAGGTCAAACGCGACAATCCGAGAATTGCGGACGTGATCCCGGG
CGGTTCGCCGGCGAATCCGATGGGCGTCGCCGCGATGACTCTCTCCGGCGGCGGGCAATACGCCATTCACGGCACCAACC
GGCCAGGGTCGATCGGCCGCTTCGTGTCCTACGGCTGCATCCGCATGTATAATGCCGACATCGACGATCTCTACCGGCGC
GTGTCGGTCGGCACGCCGGTGGTGGTGACGCAGCGCTGA

Upstream 100 bases:

>100_bases
TGCTCGATAAAGAAAGTGAACGCTGGAGTCCCTCTCCATCGGGTCATTTGATGCGAACAGATTTGAAGCGAGGCTTTTTG
AAGCAGACTTGGAGCGAAGA

Downstream 100 bases:

>100_bases
TCGGATTCCTTTACGGCGAATCCGGAATAGCCGACGCGCGACTGCGCCGGCTTCCGAACCGCTGGCCGACAACGATCGTC
TGGTTCGTTGTCACGACGAC

Product: ErfK/YbiS/YcfS/YnhG

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 172; Mature: 172

Protein sequence:

>172_residues
MLTRVAAVLAAIWGAGLLGIGSAEARPEMVGYQGGYAPGTIVVKTSERRLYLIIDSDRALRYPVGVGRAGKQWSGAARIE
GKYRNPAWAPPAEVKRDNPRIADVIPGGSPANPMGVAAMTLSGGGQYAIHGTNRPGSIGRFVSYGCIRMYNADIDDLYRR
VSVGTPVVVTQR

Sequences:

>Translated_172_residues
MLTRVAAVLAAIWGAGLLGIGSAEARPEMVGYQGGYAPGTIVVKTSERRLYLIIDSDRALRYPVGVGRAGKQWSGAARIE
GKYRNPAWAPPAEVKRDNPRIADVIPGGSPANPMGVAAMTLSGGGQYAIHGTNRPGSIGRFVSYGCIRMYNADIDDLYRR
VSVGTPVVVTQR
>Mature_172_residues
MLTRVAAVLAAIWGAGLLGIGSAEARPEMVGYQGGYAPGTIVVKTSERRLYLIIDSDRALRYPVGVGRAGKQWSGAARIE
GKYRNPAWAPPAEVKRDNPRIADVIPGGSPANPMGVAAMTLSGGGQYAIHGTNRPGSIGRFVSYGCIRMYNADIDDLYRR
VSVGTPVVVTQR

Specific function: Responsible, at least in part, for generating a meso- diaminopimelyl-3-a meso-diaminopimelyl-3 cross-link [H]

COG id: COG1376

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 LysM repeat [H]

Homologues:

Organism=Escherichia coli, GI1787968, Length=136, Percent_Identity=38.9705882352941, Blast_Score=82, Evalue=1e-17,
Organism=Escherichia coli, GI1788299, Length=135, Percent_Identity=39.2592592592593, Blast_Score=81, Evalue=3e-17,
Organism=Escherichia coli, GI1787040, Length=134, Percent_Identity=37.3134328358209, Blast_Score=79, Evalue=2e-16,
Organism=Escherichia coli, GI1787356, Length=136, Percent_Identity=36.0294117647059, Blast_Score=70, Evalue=9e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018392
- InterPro:   IPR002482
- InterPro:   IPR005490 [H]

Pfam domain/function: PF01476 LysM; PF03734 YkuD [H]

EC number: NA

Molecular weight: Translated: 18272; Mature: 18272

Theoretical pI: Translated: 10.37; Mature: 10.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTRVAAVLAAIWGAGLLGIGSAEARPEMVGYQGGYAPGTIVVKTSERRLYLIIDSDRAL
CHHHHHHHHHHHHCCCEEECCCCCCCCCEECCCCCCCCCEEEEEECCCEEEEEEECCCEE
RYPVGVGRAGKQWSGAARIEGKYRNPAWAPPAEVKRDNPRIADVIPGGSPANPMGVAAMT
ECCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHCCCCCCCEEEECCCCCCCCCCEEEEEE
LSGGGQYAIHGTNRPGSIGRFVSYGCIRMYNADIDDLYRRVSVGTPVVVTQR
ECCCCEEEEECCCCCCCHHHHHHHCEEEEECCCHHHHHHHHCCCCCEEEECC
>Mature Secondary Structure
MLTRVAAVLAAIWGAGLLGIGSAEARPEMVGYQGGYAPGTIVVKTSERRLYLIIDSDRAL
CHHHHHHHHHHHHCCCEEECCCCCCCCCEECCCCCCCCCEEEEEECCCEEEEEEECCCEE
RYPVGVGRAGKQWSGAARIEGKYRNPAWAPPAEVKRDNPRIADVIPGGSPANPMGVAAMT
ECCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHCCCCCCCEEEECCCCCCCCCCEEEEEE
LSGGGQYAIHGTNRPGSIGRFVSYGCIRMYNADIDDLYRRVSVGTPVVVTQR
ECCCCEEEEECCCCCCCHHHHHHHCEEEEECCCHHHHHHHHCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 9097039 [H]