Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
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Accession | NC_007347 |
Length | 3,806,533 |
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The map label for this gene is 73542819
Identifier: 73542819
GI number: 73542819
Start: 3445017
End: 3446120
Strand: Reverse
Name: 73542819
Synonym: Reut_A3135
Alternate gene names: NA
Gene position: 3446120-3445017 (Counterclockwise)
Preceding gene: 73542821
Following gene: 73542818
Centisome position: 90.53
GC content: 64.58
Gene sequence:
>1104_bases ATGTCAGGGGGGGTCACCTTGCGACGGGGCATTTTGTCGGGGCTTCTGCGCCGGACTACGGTCGGCGTGGACATCGGGTC GTCCAGTGTCAAGGTAGTCGAGCTGTCCGTGGGGGGCAGCAAACAGGACTACCGGCTGGAAAAATGTGCCAGCGAATTGC TGGACCGCAATGCCGTTGCCGACGGCAACGTCATCAACATCGAAGCTGTGGGCATCGCGCTCAAGCGCGCGCTCGGCAAG GCCGGCATCCGCTCGAAGGACGTGGTGCTCGGCGTGCCGTCGATGCTGACGGAGTCACAGACTGTCAGCTTGCCGGACAA CCTGTCCGAAGACGAACTCTATTCCCAGGTCGAATCCGAAGCGCACCGGCTTTATCCGCCGTCGCAGACGGTCAATTTCG ACTTCGCCGTGATCGGCCCGAGCGAAACCGAGGGCGGCATCGGCGTGCGCGTGACCGCGGCGAACAGCGATCGCGTGCAG GAGCGCGTGACCGCCGCCGAGATGGCCGGGCTGCGCCCGCAGGTCATGGACGTCGAGGAATACGCGGTGCAGCGCACCAT CGTGCAGATGCTCGGCGTGCCGCGCGAGATGTCGGAAGCCGATGCGCGCGCGCTGCCCGTAGTGGCGGTCGTCCACCTGG GCGGCAGCCGTTCCAAGGCCATCTTCTATCAAGGCTGGAAAGAGCTGTACGAGCAGCCGCTGAACAGCTACGGCGACCAG CTTACGCAGAGCGCCGCGCGCATGTTCACGCTCGATGCGCTCAAGGCCGAGATCAAGAAGCGCAAGAACACGCTGCCCGA AGCCTGGCGTACCCAGTTGCTCAAGCCGTCGCTCGAAGCGCTGGCCATGGAAGTGCAGGCCGCGGTCGGCAATTTCATCG CCAGTTCCAGCCTGGGGCGCGTGGACGAGATCCTGCTGTCGGGCGGGCATGCGTCGCTGCTCGGCGTGCAGGCGGCGATC CAGCAGCAGACCCAGATCACTACCACGCTCGCGAACCCGTTCGCCAACATGGTCACGAACGGCAAGGTCAACGAACGGTA TCTGCAGCGTGACTTGCCGGCGTATATCGTCAGCGCCGGACTGGCATTGCGCGGCCTGCAATAA
Upstream 100 bases:
>100_bases TGCCGGTTTTTGTGAGAATCGACCAACATAAAAGAGCAAACGTTTCATCCAAGAAACAAGGCTCGCCCGATTAGAGCAGT CAAGCCGGGGGCGAGTTCAA
Downstream 100 bases:
>100_bases CGCACCCCGGGGGAATCCGAATGTCAACGAACACACTCCCGTCGGTCAACCTCCTGCCCTACCACGAAGCCCGCAAGGCC GCCCGACGCAAGCGCGTCTA
Product: Type IV pilus assembly protein PilM
Products: NA
Alternate protein names: Type IV Pilus Biogenesis Protein PilM; Type 4 Fimbrial Biogenesis Protein PilM; Tfp Pilus Assembly Protein ATPase PilM; Tfp Pilus Assembly Protein; Fimbrial Assembly Membrane Protein; Type Iv Pilus Assembly Protein Pilm; Type IV Pilus Assembly Protein; Response Regulator Receiver Domain Protein; Response Regulator Receiver Domain-Containing Protein; Type IV Fimbrial Biogenesis Protein PilM; PilM Type IV Pilus Assembly Protein; Fimbrial Assembly Protein; Type IV Pilus Biogenesis Protein TapM; Type 4 Fimbrial Biogenesis Protein; Pili Assembly Protein; Type IV Pilus Biogenesis ATPase PilM; Fimbrial Assembly Protein PilM
Number of amino acids: Translated: 367; Mature: 366
Protein sequence:
>367_residues MSGGVTLRRGILSGLLRRTTVGVDIGSSSVKVVELSVGGSKQDYRLEKCASELLDRNAVADGNVINIEAVGIALKRALGK AGIRSKDVVLGVPSMLTESQTVSLPDNLSEDELYSQVESEAHRLYPPSQTVNFDFAVIGPSETEGGIGVRVTAANSDRVQ ERVTAAEMAGLRPQVMDVEEYAVQRTIVQMLGVPREMSEADARALPVVAVVHLGGSRSKAIFYQGWKELYEQPLNSYGDQ LTQSAARMFTLDALKAEIKKRKNTLPEAWRTQLLKPSLEALAMEVQAAVGNFIASSSLGRVDEILLSGGHASLLGVQAAI QQQTQITTTLANPFANMVTNGKVNERYLQRDLPAYIVSAGLALRGLQ
Sequences:
>Translated_367_residues MSGGVTLRRGILSGLLRRTTVGVDIGSSSVKVVELSVGGSKQDYRLEKCASELLDRNAVADGNVINIEAVGIALKRALGK AGIRSKDVVLGVPSMLTESQTVSLPDNLSEDELYSQVESEAHRLYPPSQTVNFDFAVIGPSETEGGIGVRVTAANSDRVQ ERVTAAEMAGLRPQVMDVEEYAVQRTIVQMLGVPREMSEADARALPVVAVVHLGGSRSKAIFYQGWKELYEQPLNSYGDQ LTQSAARMFTLDALKAEIKKRKNTLPEAWRTQLLKPSLEALAMEVQAAVGNFIASSSLGRVDEILLSGGHASLLGVQAAI QQQTQITTTLANPFANMVTNGKVNERYLQRDLPAYIVSAGLALRGLQ >Mature_366_residues SGGVTLRRGILSGLLRRTTVGVDIGSSSVKVVELSVGGSKQDYRLEKCASELLDRNAVADGNVINIEAVGIALKRALGKA GIRSKDVVLGVPSMLTESQTVSLPDNLSEDELYSQVESEAHRLYPPSQTVNFDFAVIGPSETEGGIGVRVTAANSDRVQE RVTAAEMAGLRPQVMDVEEYAVQRTIVQMLGVPREMSEADARALPVVAVVHLGGSRSKAIFYQGWKELYEQPLNSYGDQL TQSAARMFTLDALKAEIKKRKNTLPEAWRTQLLKPSLEALAMEVQAAVGNFIASSSLGRVDEILLSGGHASLLGVQAAIQ QQTQITTTLANPFANMVTNGKVNERYLQRDLPAYIVSAGLALRGLQ
Specific function: Unknown
COG id: COG4972
COG function: function code NU; Tfp pilus assembly protein, ATPase PilM
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39493; Mature: 39361
Theoretical pI: Translated: 6.32; Mature: 6.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGGVTLRRGILSGLLRRTTVGVDIGSSSVKVVELSVGGSKQDYRLEKCASELLDRNAVA CCCCHHHHHHHHHHHHHHHHCCEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCC DGNVINIEAVGIALKRALGKAGIRSKDVVLGVPSMLTESQTVSLPDNLSEDELYSQVESE CCCEEEEHHHHHHHHHHHHHCCCCCCCEEEECHHHHCCCCEECCCCCCCHHHHHHHHHHH AHRLYPPSQTVNFDFAVIGPSETEGGIGVRVTAANSDRVQERVTAAEMAGLRPQVMDVEE HHHCCCCCCCCEEEEEEECCCCCCCCEEEEEEECCHHHHHHHHHHHHHHCCCCCCCCHHH YAVQRTIVQMLGVPREMSEADARALPVVAVVHLGGSRSKAIFYQGWKELYEQPLNSYGDQ HHHHHHHHHHHCCCHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH LTQSAARMFTLDALKAEIKKRKNTLPEAWRTQLLKPSLEALAMEVQAAVGNFIASSSLGR HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCH VDEILLSGGHASLLGVQAAIQQQTQITTTLANPFANMVTNGKVNERYLQRDLPAYIVSAG HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHH LALRGLQ HHHCCCC >Mature Secondary Structure SGGVTLRRGILSGLLRRTTVGVDIGSSSVKVVELSVGGSKQDYRLEKCASELLDRNAVA CCCHHHHHHHHHHHHHHHHCCEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCC DGNVINIEAVGIALKRALGKAGIRSKDVVLGVPSMLTESQTVSLPDNLSEDELYSQVESE CCCEEEEHHHHHHHHHHHHHCCCCCCCEEEECHHHHCCCCEECCCCCCCHHHHHHHHHHH AHRLYPPSQTVNFDFAVIGPSETEGGIGVRVTAANSDRVQERVTAAEMAGLRPQVMDVEE HHHCCCCCCCCEEEEEEECCCCCCCCEEEEEEECCHHHHHHHHHHHHHHCCCCCCCCHHH YAVQRTIVQMLGVPREMSEADARALPVVAVVHLGGSRSKAIFYQGWKELYEQPLNSYGDQ HHHHHHHHHHHCCCHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH LTQSAARMFTLDALKAEIKKRKNTLPEAWRTQLLKPSLEALAMEVQAAVGNFIASSSLGR HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCH VDEILLSGGHASLLGVQAAIQQQTQITTTLANPFANMVTNGKVNERYLQRDLPAYIVSAG HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHH LALRGLQ HHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA