Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
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Accession | NC_007347 |
Length | 3,806,533 |
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The map label for this gene is 73542818
Identifier: 73542818
GI number: 73542818
Start: 3444355
End: 3444996
Strand: Reverse
Name: 73542818
Synonym: Reut_A3134
Alternate gene names: NA
Gene position: 3444996-3444355 (Counterclockwise)
Preceding gene: 73542819
Following gene: 73542817
Centisome position: 90.5
GC content: 65.26
Gene sequence:
>642_bases ATGTCAACGAACACACTCCCGTCGGTCAACCTCCTGCCCTACCACGAAGCCCGCAAGGCCGCCCGACGCAAGCGCGTCTA CGCGATCCTTGGGGGCGCGGCGGCGGCCGGCGCGGTGGTGGTGCTGCTGGGCGGGCTTTATATCGATCACGAGATCGAAT CCGTGGTGGGGCTGAACCAGGTGCTCACCGCCGAAAACGCGCGCCTGGACGGCCAGATCCGCGAGGTCAACACACTCAAG AAGGACATCGAGGCCCTGTTGCAACGCCAGCAGGCCGTGGAGAGCCTGCAGACCGAACGCAACCGGCCGGTGCAGCTGCT CGAGGAACTGGTACGCCAGGTGCCGGAAGGCGTCTACCTGACCAGCCTCAAGCAGACCGGCGATTCGTTCACGATTGCCG GCGTGGCGCAGTCCAACGAGCGCATTTCCGAGCTGTTGCGCAATGTCGGCGCGGTGCCATGGCTCGACAAGGCCGAACTG GTCGAGTCCAAGGCCGTGACCATGACCAACAACCTGCGTGAACAGCGCCGCCTGTTCGATTTCTCGATGCGCTTCGCCTA CCGCGCTCCCGAAACGCCTGCCGACAAGAAGAACGGCGCGGCAAGCGCGGCCCAGGCACCGGCCGCTAACGGAAAGGCCT GA
Upstream 100 bases:
>100_bases AGGTCAACGAACGGTATCTGCAGCGTGACTTGCCGGCGTATATCGTCAGCGCCGGACTGGCATTGCGCGGCCTGCAATAA CGCACCCCGGGGGAATCCGA
Downstream 100 bases:
>100_bases CCATGGCGCTCAATACCGAAATCAACCTGGCGGACCTGACAGGCCAGTTCCGCGGGCTCAATATGAACGAGCCCGAGACT TGGCCCACGGCGCCGCGCGT
Product: fimbrial assembly
Products: NA
Alternate protein names: Fimbrial Assembly; Type IV Pilus Biogenesis Protein PilN; Type 4 Fimbrial Biogenesis Protein PilN; Tfp Pilus Assembly Protein PilN; Fimbrial Assembly Protein; Type IV Pilus Assembly Protein PilN; Periplasmic Sensor Signal Transduction Histidine Kinase; Tfp Pilus Assembly Protein; PilN Type IV Pilus Assembly Protein; Type IV Pilus Biogenesis Fimbrial Assembly; Fimbrial Assembly Membrane Protein; LOW QUALITY PROTEIN Tfp Pilus Assembly Protein PilN; Type IV Fimbrial Biogenesis Protein PilN; Type 4 Fimbrial Biogenesis Protein; Type IV Pilus Assembly Protein Piln; Fimbrial Type-4 Assembly Transmembrane Protein
Number of amino acids: Translated: 213; Mature: 212
Protein sequence:
>213_residues MSTNTLPSVNLLPYHEARKAARRKRVYAILGGAAAAGAVVVLLGGLYIDHEIESVVGLNQVLTAENARLDGQIREVNTLK KDIEALLQRQQAVESLQTERNRPVQLLEELVRQVPEGVYLTSLKQTGDSFTIAGVAQSNERISELLRNVGAVPWLDKAEL VESKAVTMTNNLREQRRLFDFSMRFAYRAPETPADKKNGAASAAQAPAANGKA
Sequences:
>Translated_213_residues MSTNTLPSVNLLPYHEARKAARRKRVYAILGGAAAAGAVVVLLGGLYIDHEIESVVGLNQVLTAENARLDGQIREVNTLK KDIEALLQRQQAVESLQTERNRPVQLLEELVRQVPEGVYLTSLKQTGDSFTIAGVAQSNERISELLRNVGAVPWLDKAEL VESKAVTMTNNLREQRRLFDFSMRFAYRAPETPADKKNGAASAAQAPAANGKA >Mature_212_residues STNTLPSVNLLPYHEARKAARRKRVYAILGGAAAAGAVVVLLGGLYIDHEIESVVGLNQVLTAENARLDGQIREVNTLKK DIEALLQRQQAVESLQTERNRPVQLLEELVRQVPEGVYLTSLKQTGDSFTIAGVAQSNERISELLRNVGAVPWLDKAELV ESKAVTMTNNLREQRRLFDFSMRFAYRAPETPADKKNGAASAAQAPAANGKA
Specific function: Unknown
COG id: COG3166
COG function: function code NU; Tfp pilus assembly protein PilN
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23276; Mature: 23145
Theoretical pI: Translated: 9.67; Mature: 9.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTNTLPSVNLLPYHEARKAARRKRVYAILGGAAAAGAVVVLLGGLYIDHEIESVVGLNQ CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLTAENARLDGQIREVNTLKKDIEALLQRQQAVESLQTERNRPVQLLEELVRQVPEGVYL HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEE TSLKQTGDSFTIAGVAQSNERISELLRNVGAVPWLDKAELVESKAVTMTNNLREQRRLFD HHHHHCCCCEEEEEECCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH FSMRFAYRAPETPADKKNGAASAAQAPAANGKA HHHHHHCCCCCCCCCCCCCCCHHHCCCCCCCCC >Mature Secondary Structure STNTLPSVNLLPYHEARKAARRKRVYAILGGAAAAGAVVVLLGGLYIDHEIESVVGLNQ CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLTAENARLDGQIREVNTLKKDIEALLQRQQAVESLQTERNRPVQLLEELVRQVPEGVYL HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEE TSLKQTGDSFTIAGVAQSNERISELLRNVGAVPWLDKAELVESKAVTMTNNLREQRRLFD HHHHHCCCCEEEEEECCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH FSMRFAYRAPETPADKKNGAASAAQAPAANGKA HHHHHHCCCCCCCCCCCCCCCHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA