Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
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Accession | NC_007347 |
Length | 3,806,533 |
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The map label for this gene is cyaY
Identifier: 73542821
GI number: 73542821
Start: 3448916
End: 3449251
Strand: Reverse
Name: cyaY
Synonym: Reut_A3137
Alternate gene names: 73542821
Gene position: 3449251-3448916 (Counterclockwise)
Preceding gene: 73542824
Following gene: 73542819
Centisome position: 90.61
GC content: 66.07
Gene sequence:
>336_bases ATGCCCCCCTTGAGTGAAAGCGAGTTCCTGGCCCTGGCCGGCAAGGAGCTGGACCGCATCGAAGCCGCGGTGGAAGCGGC CGCCGACGCGGCCGACGCCGACATCGAAATCAGCCGTACCGGCAACGTGATGGAGCTGGAGTTCGAGAACGGCTCCAAGA TCATCATCAACAGCCAGGCCCCGATGCAGGAACTTTGGGTAGCGGCGCGCTCGGGCGGTTTCCATTTCCGCCGCGACGGC GAGCGGTGGGTCGATACGCGCAGCGGCGATGAGCTGTATGCCGCACTGTCGGCCTATGTCAGCCAGCAGGCGGAGGCGGC GCTCAAGCTGGGCTGA
Upstream 100 bases:
>100_bases AATCCGGAAATCCTCAACAATAAAAGCCGGCCACTGCATGTGCCCCATGCGCAGCAGCAAGGCGGACAGAGTACTGGCGC CGGCGGTCTTGGAGTTTAGC
Downstream 100 bases:
>100_bases GCAACGTCCCATCCGGCGCTGACCAATGAAAAAGCCGGCCCAAGCAGGCCGGCTTTTTCGTGTGCATGGCGTCCGTGAGA CGTTCAGCCCCCGCCGAACA
Product: frataxin-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 111; Mature: 110
Protein sequence:
>111_residues MPPLSESEFLALAGKELDRIEAAVEAAADAADADIEISRTGNVMELEFENGSKIIINSQAPMQELWVAARSGGFHFRRDG ERWVDTRSGDELYAALSAYVSQQAEAALKLG
Sequences:
>Translated_111_residues MPPLSESEFLALAGKELDRIEAAVEAAADAADADIEISRTGNVMELEFENGSKIIINSQAPMQELWVAARSGGFHFRRDG ERWVDTRSGDELYAALSAYVSQQAEAALKLG >Mature_110_residues PPLSESEFLALAGKELDRIEAAVEAAADAADADIEISRTGNVMELEFENGSKIIINSQAPMQELWVAARSGGFHFRRDGE RWVDTRSGDELYAALSAYVSQQAEAALKLG
Specific function: Not Known; Its Knock Out Does Not Affect Cellular Iron Content. [C]
COG id: COG1965
COG function: function code P; Protein implicated in iron transport, frataxin homolog
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the frataxin family
Homologues:
Organism=Escherichia coli, GI1790239, Length=101, Percent_Identity=39.6039603960396, Blast_Score=76, Evalue=5e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): CYAY_CUPPJ (Q46WI6)
Other databases:
- EMBL: CP000090 - RefSeq: YP_297341.1 - ProteinModelPortal: Q46WI6 - SMR: Q46WI6 - GeneID: 3611323 - GenomeReviews: CP000090_GR - KEGG: reu:Reut_A3137 - NMPDR: fig|264198.3.peg.3573 - HOGENOM: HBG687517 - OMA: GGFHFRR - ProtClustDB: PRK00446 - BioCyc: REUT264198:REUT_A3137-MONOMER - HAMAP: MF_00142 - InterPro: IPR002908 - InterPro: IPR020895 - Gene3D: G3DSA:3.30.920.10 - TIGRFAMs: TIGR03421
Pfam domain/function: PF01491 Frataxin_Cyay; SSF55387 Frataxin_like
EC number: NA
Molecular weight: Translated: 12043; Mature: 11912
Theoretical pI: Translated: 4.14; Mature: 4.14
Prosite motif: PS01344 FRATAXIN_1; PS50810 FRATAXIN_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPLSESEFLALAGKELDRIEAAVEAAADAADADIEISRTGNVMELEFENGSKIIINSQA CCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCCCEEEECCCCEEEEEECCCCEEEEECCC PMQELWVAARSGGFHFRRDGERWVDTRSGDELYAALSAYVSQQAEAALKLG CHHHHHHHHCCCCEEEECCCCEECCCCCCHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure PPLSESEFLALAGKELDRIEAAVEAAADAADADIEISRTGNVMELEFENGSKIIINSQA CCCCCCCEEEECCCHHHHHHHHHHHHCCCCCCCEEEECCCCEEEEEECCCCEEEEECCC PMQELWVAARSGGFHFRRDGERWVDTRSGDELYAALSAYVSQQAEAALKLG CHHHHHHHHCCCCEEEECCCCEECCCCCCHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA