Click here to switch to the map view.

The map label for this gene is yhdH [H]

Identifier: 73542718

GI number: 73542718

Start: 3338513

End: 3339517

Strand: Reverse

Name: yhdH [H]

Synonym: Reut_A3034

Alternate gene names: 73542718

Gene position: 3339517-3338513 (Counterclockwise)

Preceding gene: 73542719

Following gene: 73542717

Centisome position: 87.73

GC content: 69.05

Gene sequence:

>1005_bases
ATGACGTTCCAGGCATTGCTGCTGACACAGGCCGACGGCGCGACCCAGGCCAACATCGCCACGCTGGATGAGAGCCAACT
GCCCACTGAGGGCGACGTGCTGGTCGCGGTCGACTATTCGACGATCAACTTCAAGGACGGCCTGGCGATCACGGGGCGTT
CGCCCGTGGTGCGCAAGTGGCCGATGGTGGCCGGCATCGATGGTGCCGGCACGGTGCTGGAGTCCGCGCACCCGCGCTGG
AAGGCCGGCGACAAGGTGGTGCTGAACGGCTATGGCGTCGGCGAAACGCACTGGGGCTGCCTGGCGCAGCGTGCGCGCCT
GAAGGGCGACTGGCTGGTGCGGCTGCCCGATGCCTTCACGACGCGCCAGGCCATGGCGATCGGCACGGCAGGCTATACGG
CGATGCTATCGGTGCTCGGACTGGAGCGCGGCGGCGTCAATGGCCCCGTGCGTCCCGGCGATGGCGATGTGCTGGTCACT
GGCGCATCGGGCGGCGTGGGCACGGTGGCGATCGCGATTCTCGGCAAGCTCGGCTATCGCGTGGTGGCGTCCACCGGCAA
GCGCGATGAGGCGGATTTCCTCAAGGCGCTGGGCGCAGCGGAGGTCATCGACCGTGCCGAACTGTCGGCGCCGGGCAAGC
CGCTGCAGAAGGAACGCTGGGCCGCCGTGATTGATGCGGTGGGTTCGCACACGCTCGTCAACGCGTGCGCGCAGGTGCGG
TACGGCGGCGTAGTCACGGCATGCGGGCTCGCGCAGGGCATGGACTTCCCGGCTTCGGTCGCGCCGTTCATCCTGCGCAG
CGTGACGCTGGCCGGTATCGACAGCGTGATGGCAGCCATGTCGCTGCGCGAACAGGCATGGGCGCGGCTGGCCACGGACC
TCGAGCCGGATCGCCTCAACGCGATCACGCGCGAGATCGCACTGGGCGAAGCGGTCGAAGCCGGCCGCAGCATCGTCGAA
GGCGGCCTGCGTGGGCGCACGGTGGTCAACGTCAACCGCAGCTGA

Upstream 100 bases:

>100_bases
CCGAGCAGGCGGCCGGCTCAGTCCGGCCGTTTTGCTTTGCGGACCATCCCCGCATCATCCCTTCGCAAGATCGCCCGGCA
GGGCGGCACAGGAGACTTCC

Downstream 100 bases:

>100_bases
GCGCGTTGGCAGCCTCGGCGGATCGCGCCGAATGACGAACGATACAATCATGCCCATGACGCCGATCCGCTATGCCATCG
CTCCGCTTCAACCCGAAGCG

Product: zinc-containing alcohol dehydrogenase superfamily protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 334; Mature: 333

Protein sequence:

>334_residues
MTFQALLLTQADGATQANIATLDESQLPTEGDVLVAVDYSTINFKDGLAITGRSPVVRKWPMVAGIDGAGTVLESAHPRW
KAGDKVVLNGYGVGETHWGCLAQRARLKGDWLVRLPDAFTTRQAMAIGTAGYTAMLSVLGLERGGVNGPVRPGDGDVLVT
GASGGVGTVAIAILGKLGYRVVASTGKRDEADFLKALGAAEVIDRAELSAPGKPLQKERWAAVIDAVGSHTLVNACAQVR
YGGVVTACGLAQGMDFPASVAPFILRSVTLAGIDSVMAAMSLREQAWARLATDLEPDRLNAITREIALGEAVEAGRSIVE
GGLRGRTVVNVNRS

Sequences:

>Translated_334_residues
MTFQALLLTQADGATQANIATLDESQLPTEGDVLVAVDYSTINFKDGLAITGRSPVVRKWPMVAGIDGAGTVLESAHPRW
KAGDKVVLNGYGVGETHWGCLAQRARLKGDWLVRLPDAFTTRQAMAIGTAGYTAMLSVLGLERGGVNGPVRPGDGDVLVT
GASGGVGTVAIAILGKLGYRVVASTGKRDEADFLKALGAAEVIDRAELSAPGKPLQKERWAAVIDAVGSHTLVNACAQVR
YGGVVTACGLAQGMDFPASVAPFILRSVTLAGIDSVMAAMSLREQAWARLATDLEPDRLNAITREIALGEAVEAGRSIVE
GGLRGRTVVNVNRS
>Mature_333_residues
TFQALLLTQADGATQANIATLDESQLPTEGDVLVAVDYSTINFKDGLAITGRSPVVRKWPMVAGIDGAGTVLESAHPRWK
AGDKVVLNGYGVGETHWGCLAQRARLKGDWLVRLPDAFTTRQAMAIGTAGYTAMLSVLGLERGGVNGPVRPGDGDVLVTG
ASGGVGTVAIAILGKLGYRVVASTGKRDEADFLKALGAAEVIDRAELSAPGKPLQKERWAAVIDAVGSHTLVNACAQVRY
GGVVTACGLAQGMDFPASVAPFILRSVTLAGIDSVMAAMSLREQAWARLATDLEPDRLNAITREIALGEAVEAGRSIVEG
GLRGRTVVNVNRS

Specific function: Unknown

COG id: COG0604

COG function: function code CR; NADPH:quinone reductase and related Zn-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily [H]

Homologues:

Organism=Escherichia coli, GI1789651, Length=330, Percent_Identity=52.7272727272727, Blast_Score=338, Evalue=3e-94,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013149
- InterPro:   IPR013154
- InterPro:   IPR002085
- InterPro:   IPR011032
- InterPro:   IPR016040
- InterPro:   IPR014188 [H]

Pfam domain/function: PF08240 ADH_N; PF00107 ADH_zinc_N [H]

EC number: NA

Molecular weight: Translated: 34829; Mature: 34698

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFQALLLTQADGATQANIATLDESQLPTEGDVLVAVDYSTINFKDGLAITGRSPVVRKW
CCCEEEEEEECCCCCCCEEEECCCCCCCCCCCEEEEEECEEEECCCCEEEECCCCCCCCC
PMVAGIDGAGTVLESAHPRWKAGDKVVLNGYGVGETHWGCLAQRARLKGDWLVRLPDAFT
CCEECCCCCHHHHHCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEECCCCHH
TRQAMAIGTAGYTAMLSVLGLERGGVNGPVRPGDGDVLVTGASGGVGTVAIAILGKLGYR
HHHHHEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCE
VVASTGKRDEADFLKALGAAEVIDRAELSAPGKPLQKERWAAVIDAVGSHTLVNACAQVR
EEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHH
YGGVVTACGLAQGMDFPASVAPFILRSVTLAGIDSVMAAMSLREQAWARLATDLEPDRLN
CCCEEEEHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
AITREIALGEAVEAGRSIVEGGLRGRTVVNVNRS
HHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCC
>Mature Secondary Structure 
TFQALLLTQADGATQANIATLDESQLPTEGDVLVAVDYSTINFKDGLAITGRSPVVRKW
CCEEEEEEECCCCCCCEEEECCCCCCCCCCCEEEEEECEEEECCCCEEEECCCCCCCCC
PMVAGIDGAGTVLESAHPRWKAGDKVVLNGYGVGETHWGCLAQRARLKGDWLVRLPDAFT
CCEECCCCCHHHHHCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEECCCCHH
TRQAMAIGTAGYTAMLSVLGLERGGVNGPVRPGDGDVLVTGASGGVGTVAIAILGKLGYR
HHHHHEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCE
VVASTGKRDEADFLKALGAAEVIDRAELSAPGKPLQKERWAAVIDAVGSHTLVNACAQVR
EEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHH
YGGVVTACGLAQGMDFPASVAPFILRSVTLAGIDSVMAAMSLREQAWARLATDLEPDRLN
CCCEEEEHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
AITREIALGEAVEAGRSIVEGGLRGRTVVNVNRS
HHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1370469; 9278503 [H]