| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
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The map label for this gene is 73542717
Identifier: 73542717
GI number: 73542717
Start: 3336643
End: 3338481
Strand: Reverse
Name: 73542717
Synonym: Reut_A3033
Alternate gene names: NA
Gene position: 3338481-3336643 (Counterclockwise)
Preceding gene: 73542718
Following gene: 73542716
Centisome position: 87.7
GC content: 66.29
Gene sequence:
>1839_bases ATGACGAACGATACAATCATGCCCATGACGCCGATCCGCTATGCCATCGCTCCGCTTCAACCCGAAGCGCATCTCTTCGC CGTCACCGTCACGGTGACTTCGCCCGATCCCGCCGGCCAGCGCTTTTTCCTGCCGGCCTGGATTCCGGGCAGCTACATGA TTCGCGACTTCGCCCGCCATATCGTGCGCATCCGCGCCGATGCGGGGGGCAAAGCCGTGGCGCTGACCAAGCTCGACAAG CAGAGCTGGCAGGCCGCGCCGGTCGATGTTTCCGCCGGTCCGCTCACGCTGAGCTACGAGGTCTACGCGTGGGATCTGTC GGTGCGCGCCGCGCATCTCGATACGACCCACGGCTTCTTCAACGGCAGTTCGGTCTTCCTGTGCGTGGACGGACAGGAAG ATCAGCCGTGCACCGTGGACATCCACGCGCCCGCCGGCGAGACCTACCGCAACTGGCGCGTTGCCACGGCGATGCGTGAA GCCTCGGGCCGTGAAGGCGCAAAGCGCTATGGCTTCGGCCGTTACCAGGTCGCTGACTACGACGAACTGGTCGACCATCC GGTCGAAATGGGCGATTTCCTGATGGCGACGTTCCGCGCATGCGGCGCCCAGCACGACGTGGTCTTCACGGGTCGCGTGC CGCAGCTCGACATCGATCGCGTTTGCCGCGACCTCAAGCGAATCTGCGAAGCGCAGATCCGCCTGTTCGAACCGCGCAGC GCACGCGCGCCGTTCCTCGACAGCAACCGCCGCTACGTCTTCATGACGATGGTCACCACCGACGGCTACGGTGGCCTCGA GCATCGCGCCAGCACCGCGCTGATGTGCGCGCGTTCGGACCTGCCTGTGCTCGGCGACAGCGAGACCAGCGAGGGCTATC GCACGTTCCTGGGCCTGTGCAGCCACGAGTATTTCCATACCTGGAACGTCAAGCGCATCAAGCCCGCGGCGTTCGTGCCA TACCGGCTGCAGGAAGAAACCTACACGCCGCTGCTGTGGCTGTTCGAGGGTTTCACGAGCTACTACGACGACCTCGTGCT GGTGCGCTCGGGCTGCGTGACCGACACGCAGTATGTCGAGATGCTGGCCAAGACCTGGAATGGCGTGCTGCGCGGCAACG GCCGCACCAAGCAGAGCGTGGCCGAAAGCTCGTTCGATGCGTGGACCAAGTACTACCGCCAGGACGAAAACGCGCCCAAT GCCATCGTGAGCTACTACACCAAGGGGTCGCTGGTAGCGCTGGCGCTGGACCTGACCATCCGCGACAAGACCGCCGGCCG GCGTTCGCTCGACGACGTCATGCGCGCGCTGTGGCAGCGCTACGGGCGTGACTTCTATGCGCCGGACGCCGTGCAGCGTG GCGTGACTGAAGCCGAAGTCCATGCGCTGTTCGACGAGATCACGGGCCTGCGCCTCGGCGCGTTGCTGCGTTCGCTGACC GAAGGCACCGGCGAACTGCCGCTGGCGCCGCTGTTCAAGCGCTTCGGCGTCAAGGCCGAGGCACAGAAGCCGGCCCGCAC GGCGGCGCTCGGCATCAAGACCAAGACTGACGACGGCTGGGTGCGCGTGACGCAGGTGCTCGACGGCGGCGCCGCGCAGG CCGGCGGCATCTCCGCGGGCGACTTGCTTGCCGCCGTGGATGGCTTGCGCGTTGCGCCGGGGCAGCTCGACAAGCTGCTC GGACGCTACCGCGCCGGCGACCCGGTCACGCTGCACGTATTCCGTCGCGATGAACTGCAGGTGTTGCCGATCACGCTGGC ACGCGAACCGGCGGCGCAGTTCAAGCTGACCCTGGAGAGCGGGAAACACGCTTCGCGCACGCGCTGGCTGGGACGCTGA
Upstream 100 bases:
>100_bases GAAGCCGGCCGCAGCATCGTCGAAGGCGGCCTGCGTGGGCGCACGGTGGTCAACGTCAACCGCAGCTGAGCGCGTTGGCA GCCTCGGCGGATCGCGCCGA
Downstream 100 bases:
>100_bases AGCGTCTCCATTCCCGCCCGCATCTCCCCCCAGCCTGACCTAGCCACGCGTCCATGCAATACGCGCACGATCCCCGCACC TTCGTTTATTCGCACTATGT
Product: PDZ/DHR/GLGF:peptidase M61
Products: NA
Alternate protein names: Peptidase M; Protease; M61 Family Peptidase; M61 Glycyl Aminopeptidase; Glycyl Aminopeptidase; Pdz/Dhr/Glgf; M61 Family Glycyl Aminopeptidase; Aminopeptidase N Family Protein; Metallopeptidase; PDZ Domain-Containing Protein; PDZ Domain Family Protein; Trypsin-Like Serine Protease; Protease With C-Terminal PDZ Domain-Containing Protein; PDZ/DHR/GLGFPeptidase M; PDZ Domain Protein; Protease With C-Terminal PDZ Domain; Glycyl Aminopeptidase Protein; Signaling Protein; M61 Glycyl Aminopeptidase Protein; M61 Glycyl Aminopeptidase Family Protein
Number of amino acids: Translated: 612; Mature: 611
Protein sequence:
>612_residues MTNDTIMPMTPIRYAIAPLQPEAHLFAVTVTVTSPDPAGQRFFLPAWIPGSYMIRDFARHIVRIRADAGGKAVALTKLDK QSWQAAPVDVSAGPLTLSYEVYAWDLSVRAAHLDTTHGFFNGSSVFLCVDGQEDQPCTVDIHAPAGETYRNWRVATAMRE ASGREGAKRYGFGRYQVADYDELVDHPVEMGDFLMATFRACGAQHDVVFTGRVPQLDIDRVCRDLKRICEAQIRLFEPRS ARAPFLDSNRRYVFMTMVTTDGYGGLEHRASTALMCARSDLPVLGDSETSEGYRTFLGLCSHEYFHTWNVKRIKPAAFVP YRLQEETYTPLLWLFEGFTSYYDDLVLVRSGCVTDTQYVEMLAKTWNGVLRGNGRTKQSVAESSFDAWTKYYRQDENAPN AIVSYYTKGSLVALALDLTIRDKTAGRRSLDDVMRALWQRYGRDFYAPDAVQRGVTEAEVHALFDEITGLRLGALLRSLT EGTGELPLAPLFKRFGVKAEAQKPARTAALGIKTKTDDGWVRVTQVLDGGAAQAGGISAGDLLAAVDGLRVAPGQLDKLL GRYRAGDPVTLHVFRRDELQVLPITLAREPAAQFKLTLESGKHASRTRWLGR
Sequences:
>Translated_612_residues MTNDTIMPMTPIRYAIAPLQPEAHLFAVTVTVTSPDPAGQRFFLPAWIPGSYMIRDFARHIVRIRADAGGKAVALTKLDK QSWQAAPVDVSAGPLTLSYEVYAWDLSVRAAHLDTTHGFFNGSSVFLCVDGQEDQPCTVDIHAPAGETYRNWRVATAMRE ASGREGAKRYGFGRYQVADYDELVDHPVEMGDFLMATFRACGAQHDVVFTGRVPQLDIDRVCRDLKRICEAQIRLFEPRS ARAPFLDSNRRYVFMTMVTTDGYGGLEHRASTALMCARSDLPVLGDSETSEGYRTFLGLCSHEYFHTWNVKRIKPAAFVP YRLQEETYTPLLWLFEGFTSYYDDLVLVRSGCVTDTQYVEMLAKTWNGVLRGNGRTKQSVAESSFDAWTKYYRQDENAPN AIVSYYTKGSLVALALDLTIRDKTAGRRSLDDVMRALWQRYGRDFYAPDAVQRGVTEAEVHALFDEITGLRLGALLRSLT EGTGELPLAPLFKRFGVKAEAQKPARTAALGIKTKTDDGWVRVTQVLDGGAAQAGGISAGDLLAAVDGLRVAPGQLDKLL GRYRAGDPVTLHVFRRDELQVLPITLAREPAAQFKLTLESGKHASRTRWLGR >Mature_611_residues TNDTIMPMTPIRYAIAPLQPEAHLFAVTVTVTSPDPAGQRFFLPAWIPGSYMIRDFARHIVRIRADAGGKAVALTKLDKQ SWQAAPVDVSAGPLTLSYEVYAWDLSVRAAHLDTTHGFFNGSSVFLCVDGQEDQPCTVDIHAPAGETYRNWRVATAMREA SGREGAKRYGFGRYQVADYDELVDHPVEMGDFLMATFRACGAQHDVVFTGRVPQLDIDRVCRDLKRICEAQIRLFEPRSA RAPFLDSNRRYVFMTMVTTDGYGGLEHRASTALMCARSDLPVLGDSETSEGYRTFLGLCSHEYFHTWNVKRIKPAAFVPY RLQEETYTPLLWLFEGFTSYYDDLVLVRSGCVTDTQYVEMLAKTWNGVLRGNGRTKQSVAESSFDAWTKYYRQDENAPNA IVSYYTKGSLVALALDLTIRDKTAGRRSLDDVMRALWQRYGRDFYAPDAVQRGVTEAEVHALFDEITGLRLGALLRSLTE GTGELPLAPLFKRFGVKAEAQKPARTAALGIKTKTDDGWVRVTQVLDGGAAQAGGISAGDLLAAVDGLRVAPGQLDKLLG RYRAGDPVTLHVFRRDELQVLPITLAREPAAQFKLTLESGKHASRTRWLGR
Specific function: Unknown
COG id: COG3975
COG function: function code R; Predicted protease with the C-terminal PDZ domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 68121; Mature: 67990
Theoretical pI: Translated: 7.81; Mature: 7.81
Prosite motif: PS50106 PDZ
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNDTIMPMTPIRYAIAPLQPEAHLFAVTVTVTSPDPAGQRFFLPAWIPGSYMIRDFARH CCCCCCCCCCCHHHEECCCCCCCEEEEEEEEEECCCCCCCEEEEEEECCCHHHHHHHHHH IVRIRADAGGKAVALTKLDKQSWQAAPVDVSAGPLTLSYEVYAWDLSVRAAHLDTTHGFF HEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEEEEEEEEEEEEEEECCCCEE NGSSVFLCVDGQEDQPCTVDIHAPAGETYRNWRVATAMREASGREGAKRYGFGRYQVADY CCCEEEEEEECCCCCCEEEEEECCCCCCHHCCHHHHHHHHHCCCCCHHHCCCCCEEECCH DELVDHPVEMGDFLMATFRACGAQHDVVFTGRVPQLDIDRVCRDLKRICEAQIRLFEPRS HHHHCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHEEECCCC ARAPFLDSNRRYVFMTMVTTDGYGGLEHRASTALMCARSDLPVLGDSETSEGYRTFLGLC CCCCCCCCCCCEEEEEEEEECCCCCCHHHHHHEEEEECCCCCCCCCCCCCHHHHHHHHHH SHEYFHTWNVKRIKPAAFVPYRLQEETYTPLLWLFEGFTSYYDDLVLVRSGCVTDTQYVE CCCCEEECCCCEECCCEECCEEECCCCCCHHHHHHHHHHHHHHCEEEECCCCCCHHHHHH MLAKTWNGVLRGNGRTKQSVAESSFDAWTKYYRQDENAPNAIVSYYTKGSLVALALDLTI HHHHHHCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHEEEECCCCEEEEEEEEEE RDKTAGRRSLDDVMRALWQRYGRDFYAPDAVQRGVTEAEVHALFDEITGLRLGALLRSLT ECCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH EGTGELPLAPLFKRFGVKAEAQKPARTAALGIKTKTDDGWVRVTQVLDGGAAQAGGISAG CCCCCCCHHHHHHHHCCCCCCCCCCHHHEEEEEECCCCCEEEEEEECCCCCCCCCCCCHH DLLAAVDGLRVAPGQLDKLLGRYRAGDPVTLHVFRRDELQVLPITLAREPAAQFKLTLES HHHHHHCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCEEEEEEEECCCCCHHEEEEECC GKHASRTRWLGR CCCCHHHCCCCC >Mature Secondary Structure TNDTIMPMTPIRYAIAPLQPEAHLFAVTVTVTSPDPAGQRFFLPAWIPGSYMIRDFARH CCCCCCCCCCHHHEECCCCCCCEEEEEEEEEECCCCCCCEEEEEEECCCHHHHHHHHHH IVRIRADAGGKAVALTKLDKQSWQAAPVDVSAGPLTLSYEVYAWDLSVRAAHLDTTHGFF HEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEEEEEEEEEEEEEEECCCCEE NGSSVFLCVDGQEDQPCTVDIHAPAGETYRNWRVATAMREASGREGAKRYGFGRYQVADY CCCEEEEEEECCCCCCEEEEEECCCCCCHHCCHHHHHHHHHCCCCCHHHCCCCCEEECCH DELVDHPVEMGDFLMATFRACGAQHDVVFTGRVPQLDIDRVCRDLKRICEAQIRLFEPRS HHHHCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHEEECCCC ARAPFLDSNRRYVFMTMVTTDGYGGLEHRASTALMCARSDLPVLGDSETSEGYRTFLGLC CCCCCCCCCCCEEEEEEEEECCCCCCHHHHHHEEEEECCCCCCCCCCCCCHHHHHHHHHH SHEYFHTWNVKRIKPAAFVPYRLQEETYTPLLWLFEGFTSYYDDLVLVRSGCVTDTQYVE CCCCEEECCCCEECCCEECCEEECCCCCCHHHHHHHHHHHHHHCEEEECCCCCCHHHHHH MLAKTWNGVLRGNGRTKQSVAESSFDAWTKYYRQDENAPNAIVSYYTKGSLVALALDLTI HHHHHHCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHEEEECCCCEEEEEEEEEE RDKTAGRRSLDDVMRALWQRYGRDFYAPDAVQRGVTEAEVHALFDEITGLRLGALLRSLT ECCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH EGTGELPLAPLFKRFGVKAEAQKPARTAALGIKTKTDDGWVRVTQVLDGGAAQAGGISAG CCCCCCCHHHHHHHHCCCCCCCCCCHHHEEEEEECCCCCEEEEEEECCCCCCCCCCCCHH DLLAAVDGLRVAPGQLDKLLGRYRAGDPVTLHVFRRDELQVLPITLAREPAAQFKLTLES HHHHHHCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCEEEEEEEECCCCCHHEEEEECC GKHASRTRWLGR CCCCHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA