Definition Ralstonia eutropha JMP134 chromosome 1, complete sequence.
Accession NC_007347
Length 3,806,533

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The map label for this gene is 73542717

Identifier: 73542717

GI number: 73542717

Start: 3336643

End: 3338481

Strand: Reverse

Name: 73542717

Synonym: Reut_A3033

Alternate gene names: NA

Gene position: 3338481-3336643 (Counterclockwise)

Preceding gene: 73542718

Following gene: 73542716

Centisome position: 87.7

GC content: 66.29

Gene sequence:

>1839_bases
ATGACGAACGATACAATCATGCCCATGACGCCGATCCGCTATGCCATCGCTCCGCTTCAACCCGAAGCGCATCTCTTCGC
CGTCACCGTCACGGTGACTTCGCCCGATCCCGCCGGCCAGCGCTTTTTCCTGCCGGCCTGGATTCCGGGCAGCTACATGA
TTCGCGACTTCGCCCGCCATATCGTGCGCATCCGCGCCGATGCGGGGGGCAAAGCCGTGGCGCTGACCAAGCTCGACAAG
CAGAGCTGGCAGGCCGCGCCGGTCGATGTTTCCGCCGGTCCGCTCACGCTGAGCTACGAGGTCTACGCGTGGGATCTGTC
GGTGCGCGCCGCGCATCTCGATACGACCCACGGCTTCTTCAACGGCAGTTCGGTCTTCCTGTGCGTGGACGGACAGGAAG
ATCAGCCGTGCACCGTGGACATCCACGCGCCCGCCGGCGAGACCTACCGCAACTGGCGCGTTGCCACGGCGATGCGTGAA
GCCTCGGGCCGTGAAGGCGCAAAGCGCTATGGCTTCGGCCGTTACCAGGTCGCTGACTACGACGAACTGGTCGACCATCC
GGTCGAAATGGGCGATTTCCTGATGGCGACGTTCCGCGCATGCGGCGCCCAGCACGACGTGGTCTTCACGGGTCGCGTGC
CGCAGCTCGACATCGATCGCGTTTGCCGCGACCTCAAGCGAATCTGCGAAGCGCAGATCCGCCTGTTCGAACCGCGCAGC
GCACGCGCGCCGTTCCTCGACAGCAACCGCCGCTACGTCTTCATGACGATGGTCACCACCGACGGCTACGGTGGCCTCGA
GCATCGCGCCAGCACCGCGCTGATGTGCGCGCGTTCGGACCTGCCTGTGCTCGGCGACAGCGAGACCAGCGAGGGCTATC
GCACGTTCCTGGGCCTGTGCAGCCACGAGTATTTCCATACCTGGAACGTCAAGCGCATCAAGCCCGCGGCGTTCGTGCCA
TACCGGCTGCAGGAAGAAACCTACACGCCGCTGCTGTGGCTGTTCGAGGGTTTCACGAGCTACTACGACGACCTCGTGCT
GGTGCGCTCGGGCTGCGTGACCGACACGCAGTATGTCGAGATGCTGGCCAAGACCTGGAATGGCGTGCTGCGCGGCAACG
GCCGCACCAAGCAGAGCGTGGCCGAAAGCTCGTTCGATGCGTGGACCAAGTACTACCGCCAGGACGAAAACGCGCCCAAT
GCCATCGTGAGCTACTACACCAAGGGGTCGCTGGTAGCGCTGGCGCTGGACCTGACCATCCGCGACAAGACCGCCGGCCG
GCGTTCGCTCGACGACGTCATGCGCGCGCTGTGGCAGCGCTACGGGCGTGACTTCTATGCGCCGGACGCCGTGCAGCGTG
GCGTGACTGAAGCCGAAGTCCATGCGCTGTTCGACGAGATCACGGGCCTGCGCCTCGGCGCGTTGCTGCGTTCGCTGACC
GAAGGCACCGGCGAACTGCCGCTGGCGCCGCTGTTCAAGCGCTTCGGCGTCAAGGCCGAGGCACAGAAGCCGGCCCGCAC
GGCGGCGCTCGGCATCAAGACCAAGACTGACGACGGCTGGGTGCGCGTGACGCAGGTGCTCGACGGCGGCGCCGCGCAGG
CCGGCGGCATCTCCGCGGGCGACTTGCTTGCCGCCGTGGATGGCTTGCGCGTTGCGCCGGGGCAGCTCGACAAGCTGCTC
GGACGCTACCGCGCCGGCGACCCGGTCACGCTGCACGTATTCCGTCGCGATGAACTGCAGGTGTTGCCGATCACGCTGGC
ACGCGAACCGGCGGCGCAGTTCAAGCTGACCCTGGAGAGCGGGAAACACGCTTCGCGCACGCGCTGGCTGGGACGCTGA

Upstream 100 bases:

>100_bases
GAAGCCGGCCGCAGCATCGTCGAAGGCGGCCTGCGTGGGCGCACGGTGGTCAACGTCAACCGCAGCTGAGCGCGTTGGCA
GCCTCGGCGGATCGCGCCGA

Downstream 100 bases:

>100_bases
AGCGTCTCCATTCCCGCCCGCATCTCCCCCCAGCCTGACCTAGCCACGCGTCCATGCAATACGCGCACGATCCCCGCACC
TTCGTTTATTCGCACTATGT

Product: PDZ/DHR/GLGF:peptidase M61

Products: NA

Alternate protein names: Peptidase M; Protease; M61 Family Peptidase; M61 Glycyl Aminopeptidase; Glycyl Aminopeptidase; Pdz/Dhr/Glgf; M61 Family Glycyl Aminopeptidase; Aminopeptidase N Family Protein; Metallopeptidase; PDZ Domain-Containing Protein; PDZ Domain Family Protein; Trypsin-Like Serine Protease; Protease With C-Terminal PDZ Domain-Containing Protein; PDZ/DHR/GLGFPeptidase M; PDZ Domain Protein; Protease With C-Terminal PDZ Domain; Glycyl Aminopeptidase Protein; Signaling Protein; M61 Glycyl Aminopeptidase Protein; M61 Glycyl Aminopeptidase Family Protein

Number of amino acids: Translated: 612; Mature: 611

Protein sequence:

>612_residues
MTNDTIMPMTPIRYAIAPLQPEAHLFAVTVTVTSPDPAGQRFFLPAWIPGSYMIRDFARHIVRIRADAGGKAVALTKLDK
QSWQAAPVDVSAGPLTLSYEVYAWDLSVRAAHLDTTHGFFNGSSVFLCVDGQEDQPCTVDIHAPAGETYRNWRVATAMRE
ASGREGAKRYGFGRYQVADYDELVDHPVEMGDFLMATFRACGAQHDVVFTGRVPQLDIDRVCRDLKRICEAQIRLFEPRS
ARAPFLDSNRRYVFMTMVTTDGYGGLEHRASTALMCARSDLPVLGDSETSEGYRTFLGLCSHEYFHTWNVKRIKPAAFVP
YRLQEETYTPLLWLFEGFTSYYDDLVLVRSGCVTDTQYVEMLAKTWNGVLRGNGRTKQSVAESSFDAWTKYYRQDENAPN
AIVSYYTKGSLVALALDLTIRDKTAGRRSLDDVMRALWQRYGRDFYAPDAVQRGVTEAEVHALFDEITGLRLGALLRSLT
EGTGELPLAPLFKRFGVKAEAQKPARTAALGIKTKTDDGWVRVTQVLDGGAAQAGGISAGDLLAAVDGLRVAPGQLDKLL
GRYRAGDPVTLHVFRRDELQVLPITLAREPAAQFKLTLESGKHASRTRWLGR

Sequences:

>Translated_612_residues
MTNDTIMPMTPIRYAIAPLQPEAHLFAVTVTVTSPDPAGQRFFLPAWIPGSYMIRDFARHIVRIRADAGGKAVALTKLDK
QSWQAAPVDVSAGPLTLSYEVYAWDLSVRAAHLDTTHGFFNGSSVFLCVDGQEDQPCTVDIHAPAGETYRNWRVATAMRE
ASGREGAKRYGFGRYQVADYDELVDHPVEMGDFLMATFRACGAQHDVVFTGRVPQLDIDRVCRDLKRICEAQIRLFEPRS
ARAPFLDSNRRYVFMTMVTTDGYGGLEHRASTALMCARSDLPVLGDSETSEGYRTFLGLCSHEYFHTWNVKRIKPAAFVP
YRLQEETYTPLLWLFEGFTSYYDDLVLVRSGCVTDTQYVEMLAKTWNGVLRGNGRTKQSVAESSFDAWTKYYRQDENAPN
AIVSYYTKGSLVALALDLTIRDKTAGRRSLDDVMRALWQRYGRDFYAPDAVQRGVTEAEVHALFDEITGLRLGALLRSLT
EGTGELPLAPLFKRFGVKAEAQKPARTAALGIKTKTDDGWVRVTQVLDGGAAQAGGISAGDLLAAVDGLRVAPGQLDKLL
GRYRAGDPVTLHVFRRDELQVLPITLAREPAAQFKLTLESGKHASRTRWLGR
>Mature_611_residues
TNDTIMPMTPIRYAIAPLQPEAHLFAVTVTVTSPDPAGQRFFLPAWIPGSYMIRDFARHIVRIRADAGGKAVALTKLDKQ
SWQAAPVDVSAGPLTLSYEVYAWDLSVRAAHLDTTHGFFNGSSVFLCVDGQEDQPCTVDIHAPAGETYRNWRVATAMREA
SGREGAKRYGFGRYQVADYDELVDHPVEMGDFLMATFRACGAQHDVVFTGRVPQLDIDRVCRDLKRICEAQIRLFEPRSA
RAPFLDSNRRYVFMTMVTTDGYGGLEHRASTALMCARSDLPVLGDSETSEGYRTFLGLCSHEYFHTWNVKRIKPAAFVPY
RLQEETYTPLLWLFEGFTSYYDDLVLVRSGCVTDTQYVEMLAKTWNGVLRGNGRTKQSVAESSFDAWTKYYRQDENAPNA
IVSYYTKGSLVALALDLTIRDKTAGRRSLDDVMRALWQRYGRDFYAPDAVQRGVTEAEVHALFDEITGLRLGALLRSLTE
GTGELPLAPLFKRFGVKAEAQKPARTAALGIKTKTDDGWVRVTQVLDGGAAQAGGISAGDLLAAVDGLRVAPGQLDKLLG
RYRAGDPVTLHVFRRDELQVLPITLAREPAAQFKLTLESGKHASRTRWLGR

Specific function: Unknown

COG id: COG3975

COG function: function code R; Predicted protease with the C-terminal PDZ domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 68121; Mature: 67990

Theoretical pI: Translated: 7.81; Mature: 7.81

Prosite motif: PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNDTIMPMTPIRYAIAPLQPEAHLFAVTVTVTSPDPAGQRFFLPAWIPGSYMIRDFARH
CCCCCCCCCCCHHHEECCCCCCCEEEEEEEEEECCCCCCCEEEEEEECCCHHHHHHHHHH
IVRIRADAGGKAVALTKLDKQSWQAAPVDVSAGPLTLSYEVYAWDLSVRAAHLDTTHGFF
HEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEEEEEEEEEEEEEEECCCCEE
NGSSVFLCVDGQEDQPCTVDIHAPAGETYRNWRVATAMREASGREGAKRYGFGRYQVADY
CCCEEEEEEECCCCCCEEEEEECCCCCCHHCCHHHHHHHHHCCCCCHHHCCCCCEEECCH
DELVDHPVEMGDFLMATFRACGAQHDVVFTGRVPQLDIDRVCRDLKRICEAQIRLFEPRS
HHHHCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHEEECCCC
ARAPFLDSNRRYVFMTMVTTDGYGGLEHRASTALMCARSDLPVLGDSETSEGYRTFLGLC
CCCCCCCCCCCEEEEEEEEECCCCCCHHHHHHEEEEECCCCCCCCCCCCCHHHHHHHHHH
SHEYFHTWNVKRIKPAAFVPYRLQEETYTPLLWLFEGFTSYYDDLVLVRSGCVTDTQYVE
CCCCEEECCCCEECCCEECCEEECCCCCCHHHHHHHHHHHHHHCEEEECCCCCCHHHHHH
MLAKTWNGVLRGNGRTKQSVAESSFDAWTKYYRQDENAPNAIVSYYTKGSLVALALDLTI
HHHHHHCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHEEEECCCCEEEEEEEEEE
RDKTAGRRSLDDVMRALWQRYGRDFYAPDAVQRGVTEAEVHALFDEITGLRLGALLRSLT
ECCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
EGTGELPLAPLFKRFGVKAEAQKPARTAALGIKTKTDDGWVRVTQVLDGGAAQAGGISAG
CCCCCCCHHHHHHHHCCCCCCCCCCHHHEEEEEECCCCCEEEEEEECCCCCCCCCCCCHH
DLLAAVDGLRVAPGQLDKLLGRYRAGDPVTLHVFRRDELQVLPITLAREPAAQFKLTLES
HHHHHHCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCEEEEEEEECCCCCHHEEEEECC
GKHASRTRWLGR
CCCCHHHCCCCC
>Mature Secondary Structure 
TNDTIMPMTPIRYAIAPLQPEAHLFAVTVTVTSPDPAGQRFFLPAWIPGSYMIRDFARH
CCCCCCCCCCHHHEECCCCCCCEEEEEEEEEECCCCCCCEEEEEEECCCHHHHHHHHHH
IVRIRADAGGKAVALTKLDKQSWQAAPVDVSAGPLTLSYEVYAWDLSVRAAHLDTTHGFF
HEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEEEEEEEEEEEEEEECCCCEE
NGSSVFLCVDGQEDQPCTVDIHAPAGETYRNWRVATAMREASGREGAKRYGFGRYQVADY
CCCEEEEEEECCCCCCEEEEEECCCCCCHHCCHHHHHHHHHCCCCCHHHCCCCCEEECCH
DELVDHPVEMGDFLMATFRACGAQHDVVFTGRVPQLDIDRVCRDLKRICEAQIRLFEPRS
HHHHCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHEEECCCC
ARAPFLDSNRRYVFMTMVTTDGYGGLEHRASTALMCARSDLPVLGDSETSEGYRTFLGLC
CCCCCCCCCCCEEEEEEEEECCCCCCHHHHHHEEEEECCCCCCCCCCCCCHHHHHHHHHH
SHEYFHTWNVKRIKPAAFVPYRLQEETYTPLLWLFEGFTSYYDDLVLVRSGCVTDTQYVE
CCCCEEECCCCEECCCEECCEEECCCCCCHHHHHHHHHHHHHHCEEEECCCCCCHHHHHH
MLAKTWNGVLRGNGRTKQSVAESSFDAWTKYYRQDENAPNAIVSYYTKGSLVALALDLTI
HHHHHHCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHEEEECCCCEEEEEEEEEE
RDKTAGRRSLDDVMRALWQRYGRDFYAPDAVQRGVTEAEVHALFDEITGLRLGALLRSLT
ECCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
EGTGELPLAPLFKRFGVKAEAQKPARTAALGIKTKTDDGWVRVTQVLDGGAAQAGGISAG
CCCCCCCHHHHHHHHCCCCCCCCCCHHHEEEEEECCCCCEEEEEEECCCCCCCCCCCCHH
DLLAAVDGLRVAPGQLDKLLGRYRAGDPVTLHVFRRDELQVLPITLAREPAAQFKLTLES
HHHHHHCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCEEEEEEEECCCCCHHEEEEECC
GKHASRTRWLGR
CCCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA