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The map label for this gene is yccS [C]

Identifier: 73542716

GI number: 73542716

Start: 3334277

End: 3336589

Strand: Reverse

Name: yccS [C]

Synonym: Reut_A3032

Alternate gene names: 73542716

Gene position: 3336589-3334277 (Counterclockwise)

Preceding gene: 73542717

Following gene: 73542713

Centisome position: 87.65

GC content: 64.85

Gene sequence:

>2313_bases
ATGCAATACGCGCACGATCCCCGCACCTTCGTTTATTCGCACTATGTCTACCGTGGCCTGCGCTCGGCCACGGGGGTGAT
CGGCGCCACGCTGATCGCGCTGCAGTTCGCCGACCTGCCCACGGCGATGGTGATCTCGATGGGCGCGCTGTGCACCAGCC
TGATGGACCTGCCCAGCCCCGTGAACCACAAGTTCAACGAGATGCTGGCCAGCGTGCTGCTTTGCGGTGCCGTCACGCTG
GTGGTGGCGCTGGCAACGCCATTCCCACGTGTGATGCCATTCGTGCTCGTGCTGGTCACGTTCATGGCCGGCATGATGTC
GGTGTACGGCAACAAGACGCTGCCGCTGCAGTTCTCCACGCTGTTCGTGATGACGCTGACCATCAACGAGGACTTCGTGG
TGCGCCGCGCGCTCGAGCACACGGCGTTGTTTATCCTCGGCGCCGTGGCGTATCTGGCCTATGCGATGCTCGTAAGCTGG
ATCACCGAGCGCCGCACCAAGCAGCAGATCCTCGCGGAATCGCTGTACGAGATGGCCCGCTATCTCGAGGTCAAGGCCGC
CTTCTACGACGCCGGCAATGATTACGAGGCGCAGTTCAACCGGCTCGTTCGGCAGCAGATCATCGTGGCCGAGCGCCAGC
AGGCCGCGCGAGATCTGGTGCTGCGCGGCAACCGTACGCCGCATGACGGGCTGCTGGTGCAGGTCCACCTGCGCATGCTC
GACCTGTACGAGTACATCCTGTCGACCAACACTGACTATCCGCTGCTGCGGCAAACCTTTGGCAGCACGCCGGTGCTCGA
CCACCTGCATCGGCTGGTGATGCTGATGTGCAAGGACGTCGAGGAGATTGCCTACGAAGTCACGCGCGGGCGGCCGTCCT
ACGCCGCCGTCGACTACCGCGACGACCTGCGCGCGGTGGAGCGCGAGATCGCCCAGCTTCGCCACCACCACATTTCGCCT
GCGGCGATGACGGCGCTGTGCGAGACGCTGGACATGATTCGCGGCGCCATCACGCTGATCGGGCAGTTGCACGAGGCCTC
GCGTACGCCTGTCGAGCCGGCCAAGGTCCTGCCGGGCGCCGACATGACCCCGTTCCTGACGCGCCAGAAATACGAGCTTG
GCGTGCTGCGCGACAACCTCAAGTGGCGTGCGCCGGCGTTCCGCTTCGCGATTCGCATCTCGATGGCGGTGGCCCTGGGG
CTGTGGATCGCGGACCACCTGCCATACGCCTCGCACGGGTACTGGATCCTGCTGACCATCATCGTCATCCTGAAGCCGAA
CTTCAGCATGACCAAGCAGCGCTACAACGACCGCGTGATCGGCACACTGATCGGCTGCATCATTTCCGTGGGCATCCTGA
AGGTGTTTGACGAACCGCTGGTGCTGCTCGGCTTCCTGTTCCTGGCACTTGTCGCGAGCGCGGCGTTCTCGACGATCAAG
TACCGCTACACGGCGATCGCGGCCTGCGTGCAGGTGCTTATCCAGATCAACCTGCTGATGCCGAACACGCAGAATGCGGC
GGGCGAACGACTGGTCGATACGGTGATCGGCGGCATCATCGCGTCGTTGTTCAGCTTCGTGCTGCCGAGCTGGGAATACC
GCGCGATCCCGAAACTCGTGGAAGGCGTGTTGCAAGCCAACCGCCGCTACATCACGGCCACGCGCGACCTGCTGCTGCGC
CGGGCCAAGGATGATTTCGCCTACCGCGTGCAGCGCAAGCAGTTCATGGATGCGCTGTCGGCACTGATCGGCTCGTTCCA
GCGCATGCTCGACGAGCCCAAGAGCCGGCACCGCGCGGTGGACAACCTGAACCGCTTCATCGTGCAGAACTACCTGGTGG
CGGCGCACGTGGCGGCGGCTCGGATCCAGGTGCGCCAGCATTACACCGAGCTTGATATTCCTGCGGCCGAAGCGGCGATC
GAACAGGCGACCGATGCGGCGAATCGCAGCCTGCAGCTCGCGATCGAGCGATTGGCTGCGGACGACCGCTCTGGTAGCCG
CGGCGCGGGTTTTATCCGCCCAAGCGAGCAGGTGGCCATTGTCAGCGGTCCTTCGCTGGAAGGGCCGCCGCCCGAACATG
CCGATGACAGGCGTGCGCGGCTAGCCGATTCGGCCGACCGGCGCCGCGCCGATGAACTTGCGCATGCGGCGGCGGCAGGG
GAATCCGTTCAAGAGCCTGGCCCCACGGCAAGTTCGACCGGCCGGCCCGCCAATGCGGTGCTCGAACGACGGTTGCGCGC
GCTGCGTGAGGATGCGGCAAAGATCGCGCTGCGCACCGGCGCGATAGGAAGGGCGATGCGGACGCGGGATTGA

Upstream 100 bases:

>100_bases
TGGAGAGCGGGAAACACGCTTCGCGCACGCGCTGGCTGGGACGCTGAAGCGTCTCCATTCCCGCCCGCATCTCCCCCCAG
CCTGACCTAGCCACGCGTCC

Downstream 100 bases:

>100_bases
GCGAAGGCGCGGACTGGCGCCCGCTTTACTGCGTGTCCCCGGACTCCGCCTGTTCTTCCCTCGGCAACGTCAACATCCCG
CTGTTATAGCTGTACTCATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 770; Mature: 770

Protein sequence:

>770_residues
MQYAHDPRTFVYSHYVYRGLRSATGVIGATLIALQFADLPTAMVISMGALCTSLMDLPSPVNHKFNEMLASVLLCGAVTL
VVALATPFPRVMPFVLVLVTFMAGMMSVYGNKTLPLQFSTLFVMTLTINEDFVVRRALEHTALFILGAVAYLAYAMLVSW
ITERRTKQQILAESLYEMARYLEVKAAFYDAGNDYEAQFNRLVRQQIIVAERQQAARDLVLRGNRTPHDGLLVQVHLRML
DLYEYILSTNTDYPLLRQTFGSTPVLDHLHRLVMLMCKDVEEIAYEVTRGRPSYAAVDYRDDLRAVEREIAQLRHHHISP
AAMTALCETLDMIRGAITLIGQLHEASRTPVEPAKVLPGADMTPFLTRQKYELGVLRDNLKWRAPAFRFAIRISMAVALG
LWIADHLPYASHGYWILLTIIVILKPNFSMTKQRYNDRVIGTLIGCIISVGILKVFDEPLVLLGFLFLALVASAAFSTIK
YRYTAIAACVQVLIQINLLMPNTQNAAGERLVDTVIGGIIASLFSFVLPSWEYRAIPKLVEGVLQANRRYITATRDLLLR
RAKDDFAYRVQRKQFMDALSALIGSFQRMLDEPKSRHRAVDNLNRFIVQNYLVAAHVAAARIQVRQHYTELDIPAAEAAI
EQATDAANRSLQLAIERLAADDRSGSRGAGFIRPSEQVAIVSGPSLEGPPPEHADDRRARLADSADRRRADELAHAAAAG
ESVQEPGPTASSTGRPANAVLERRLRALREDAAKIALRTGAIGRAMRTRD

Sequences:

>Translated_770_residues
MQYAHDPRTFVYSHYVYRGLRSATGVIGATLIALQFADLPTAMVISMGALCTSLMDLPSPVNHKFNEMLASVLLCGAVTL
VVALATPFPRVMPFVLVLVTFMAGMMSVYGNKTLPLQFSTLFVMTLTINEDFVVRRALEHTALFILGAVAYLAYAMLVSW
ITERRTKQQILAESLYEMARYLEVKAAFYDAGNDYEAQFNRLVRQQIIVAERQQAARDLVLRGNRTPHDGLLVQVHLRML
DLYEYILSTNTDYPLLRQTFGSTPVLDHLHRLVMLMCKDVEEIAYEVTRGRPSYAAVDYRDDLRAVEREIAQLRHHHISP
AAMTALCETLDMIRGAITLIGQLHEASRTPVEPAKVLPGADMTPFLTRQKYELGVLRDNLKWRAPAFRFAIRISMAVALG
LWIADHLPYASHGYWILLTIIVILKPNFSMTKQRYNDRVIGTLIGCIISVGILKVFDEPLVLLGFLFLALVASAAFSTIK
YRYTAIAACVQVLIQINLLMPNTQNAAGERLVDTVIGGIIASLFSFVLPSWEYRAIPKLVEGVLQANRRYITATRDLLLR
RAKDDFAYRVQRKQFMDALSALIGSFQRMLDEPKSRHRAVDNLNRFIVQNYLVAAHVAAARIQVRQHYTELDIPAAEAAI
EQATDAANRSLQLAIERLAADDRSGSRGAGFIRPSEQVAIVSGPSLEGPPPEHADDRRARLADSADRRRADELAHAAAAG
ESVQEPGPTASSTGRPANAVLERRLRALREDAAKIALRTGAIGRAMRTRD
>Mature_770_residues
MQYAHDPRTFVYSHYVYRGLRSATGVIGATLIALQFADLPTAMVISMGALCTSLMDLPSPVNHKFNEMLASVLLCGAVTL
VVALATPFPRVMPFVLVLVTFMAGMMSVYGNKTLPLQFSTLFVMTLTINEDFVVRRALEHTALFILGAVAYLAYAMLVSW
ITERRTKQQILAESLYEMARYLEVKAAFYDAGNDYEAQFNRLVRQQIIVAERQQAARDLVLRGNRTPHDGLLVQVHLRML
DLYEYILSTNTDYPLLRQTFGSTPVLDHLHRLVMLMCKDVEEIAYEVTRGRPSYAAVDYRDDLRAVEREIAQLRHHHISP
AAMTALCETLDMIRGAITLIGQLHEASRTPVEPAKVLPGADMTPFLTRQKYELGVLRDNLKWRAPAFRFAIRISMAVALG
LWIADHLPYASHGYWILLTIIVILKPNFSMTKQRYNDRVIGTLIGCIISVGILKVFDEPLVLLGFLFLALVASAAFSTIK
YRYTAIAACVQVLIQINLLMPNTQNAAGERLVDTVIGGIIASLFSFVLPSWEYRAIPKLVEGVLQANRRYITATRDLLLR
RAKDDFAYRVQRKQFMDALSALIGSFQRMLDEPKSRHRAVDNLNRFIVQNYLVAAHVAAARIQVRQHYTELDIPAAEAAI
EQATDAANRSLQLAIERLAADDRSGSRGAGFIRPSEQVAIVSGPSLEGPPPEHADDRRARLADSADRRRADELAHAAAAG
ESVQEPGPTASSTGRPANAVLERRLRALREDAAKIALRTGAIGRAMRTRD

Specific function: Unknown

COG id: COG1289

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yccS/yhfK family [H]

Homologues:

Organism=Escherichia coli, GI87081808, Length=622, Percent_Identity=22.8295819935691, Blast_Score=133, Evalue=4e-32,
Organism=Escherichia coli, GI87082248, Length=698, Percent_Identity=21.6332378223496, Blast_Score=84, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010019
- InterPro:   IPR010020 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 85870; Mature: 85870

Theoretical pI: Translated: 9.36; Mature: 9.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQYAHDPRTFVYSHYVYRGLRSATGVIGATLIALQFADLPTAMVISMGALCTSLMDLPSP
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCC
VNHKFNEMLASVLLCGAVTLVVALATPFPRVMPFVLVLVTFMAGMMSVYGNKTLPLQFST
CCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE
LFVMTLTINEDFVVRRALEHTALFILGAVAYLAYAMLVSWITERRTKQQILAESLYEMAR
EEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YLEVKAAFYDAGNDYEAQFNRLVRQQIIVAERQQAARDLVLRGNRTPHDGLLVQVHLRML
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
DLYEYILSTNTDYPLLRQTFGSTPVLDHLHRLVMLMCKDVEEIAYEVTRGRPSYAAVDYR
HHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCHH
DDLRAVEREIAQLRHHHISPAAMTALCETLDMIRGAITLIGQLHEASRTPVEPAKVLPGA
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCC
DMTPFLTRQKYELGVLRDNLKWRAPAFRFAIRISMAVALGLWIADHLPYASHGYWILLTI
CCCHHHHCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
IVILKPNFSMTKQRYNDRVIGTLIGCIISVGILKVFDEPLVLLGFLFLALVASAAFSTIK
HHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
YRYTAIAACVQVLIQINLLMPNTQNAAGERLVDTVIGGIIASLFSFVLPSWEYRAIPKLV
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
EGVLQANRRYITATRDLLLRRAKDDFAYRVQRKQFMDALSALIGSFQRMLDEPKSRHRAV
HHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
DNLNRFIVQNYLVAAHVAAARIQVRQHYTELDIPAAEAAIEQATDAANRSLQLAIERLAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
DDRSGSRGAGFIRPSEQVAIVSGPSLEGPPPEHADDRRARLADSADRRRADELAHAAAAG
CCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHCHHHHHHHHHHHHHHHCC
ESVQEPGPTASSTGRPANAVLERRLRALREDAAKIALRTGAIGRAMRTRD
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCC
>Mature Secondary Structure
MQYAHDPRTFVYSHYVYRGLRSATGVIGATLIALQFADLPTAMVISMGALCTSLMDLPSP
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCC
VNHKFNEMLASVLLCGAVTLVVALATPFPRVMPFVLVLVTFMAGMMSVYGNKTLPLQFST
CCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE
LFVMTLTINEDFVVRRALEHTALFILGAVAYLAYAMLVSWITERRTKQQILAESLYEMAR
EEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YLEVKAAFYDAGNDYEAQFNRLVRQQIIVAERQQAARDLVLRGNRTPHDGLLVQVHLRML
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
DLYEYILSTNTDYPLLRQTFGSTPVLDHLHRLVMLMCKDVEEIAYEVTRGRPSYAAVDYR
HHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCHH
DDLRAVEREIAQLRHHHISPAAMTALCETLDMIRGAITLIGQLHEASRTPVEPAKVLPGA
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCC
DMTPFLTRQKYELGVLRDNLKWRAPAFRFAIRISMAVALGLWIADHLPYASHGYWILLTI
CCCHHHHCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
IVILKPNFSMTKQRYNDRVIGTLIGCIISVGILKVFDEPLVLLGFLFLALVASAAFSTIK
HHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
YRYTAIAACVQVLIQINLLMPNTQNAAGERLVDTVIGGIIASLFSFVLPSWEYRAIPKLV
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
EGVLQANRRYITATRDLLLRRAKDDFAYRVQRKQFMDALSALIGSFQRMLDEPKSRHRAV
HHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
DNLNRFIVQNYLVAAHVAAARIQVRQHYTELDIPAAEAAIEQATDAANRSLQLAIERLAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
DDRSGSRGAGFIRPSEQVAIVSGPSLEGPPPEHADDRRARLADSADRRRADELAHAAAAG
CCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHCHHHHHHHHHHHHHHHCC
ESVQEPGPTASSTGRPANAVLERRLRALREDAAKIALRTGAIGRAMRTRD
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]