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The map label for this gene is yhcM [H]

Identifier: 73541732

GI number: 73541732

Start: 2243011

End: 2244108

Strand: Reverse

Name: yhcM [H]

Synonym: Reut_A2044

Alternate gene names: 73541732

Gene position: 2244108-2243011 (Counterclockwise)

Preceding gene: 73541733

Following gene: 73541731

Centisome position: 58.95

GC content: 61.2

Gene sequence:

>1098_bases
ATGAACGTCAGCGAGTACTACGAGAAGGAACTGAAGGAGCGCGGCTACCATTCCGACGAGGCGCAGTTGCGCGCCGTGGC
GCGCCTGCAGCAGTGCTACGACGAATGGGTGGCCTACAAGAGCCGGCGCAGCAATGCCATTCGCAAGCTGCTGGTGCACC
CGGAAGTACCCAAGGGCGTGTACATGTGGGGCGGGGTGGGGCGTGGGAAGTCCTTCCTGATGGACAGCTTCTATACGTGC
GTCCCGGTCGTGCGCAAGACCCGCCTGCACTTCCATGAGTTCATGCGCGAAGTGCATCGCCAGCTCGAAGAGCTGCGTGG
CCGTCCCGATCCGCTGGACGAACTGGCCAAACGGATCGCCCGGCGCTACCGTCTGATCTGCTTCGACGAGTTCCACGTCA
GTGACGTCGCGGATGCCATGATGCTGCACCGGCTGCTGCAACAGATGTTCGAGAATGGCGTGCAGTTCGTCATGACGTCC
AATTACCGCCCGGACCTGCTGTACCCGGACGGCCTGCACCGTGACCGCGTGTTGCCCGCCATTGCGTTGCTCCAGCAGAA
GCTGGACGTGCTCAATGTCGATGCCGGGATCGACTATCGCAAGCGCGCACTGGAACAGGTCGAGGCGTATCACACGCCGC
TCGATGCCAAGGCCAACTCGGCGCTGCGCGATGCCTTTACGTCCATCGCGGGCGTGGCCGATGAGTCGCCGGTACTGCAT
ATCGAACACCGCGAACTGCGTGCTCTGCGCAAGGCGAATGGCGTGGTCTGGTTCGACTTTGCGACGCTGTGTGGGGGCCC
GCGCTCGCAGAACGACTACCTGGAGCTGGCATCCCAGTTCCACACTGTTATTTTGTCCGATGTTCCGCGCATGACGCCGC
GGATGTCGTCGGAAGCCCGTCGTTTCACATGGCTGATCGACGTATTCTACGACCACAAGGTCAAGCTGCTGATGTCCGCT
GAAGTGCCTGCGGATGAGCTTTACGTCGAAGGTCAGATGGCCAGCGAATTCCACCGTACGGTCTCGCGCATTATCGAGAT
GCAGTCTCGCGAGTACCTGGAATCCGAACGGCGCACTATGGATACCTCGCTCACCTGA

Upstream 100 bases:

>100_bases
GTTTTCACTTGCAAACCATGCCGGATCGAAACGGTGCCGGGCATGGCCGCGAAGGGCGTATTGGTGCCTTTCGCGCGCAG
TCCAGAACGAAACAGCCAGC

Downstream 100 bases:

>100_bases
GCGTTGCGGCCGGATTAGCGAAGGCAGCCGGCCATTATTGACCTATATCAAGGCCGATTTGGAGATCGGCATATACCCTC
CAACGGGTAAAAAAAGATCT

Product: AFG1-like ATPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 365; Mature: 365

Protein sequence:

>365_residues
MNVSEYYEKELKERGYHSDEAQLRAVARLQQCYDEWVAYKSRRSNAIRKLLVHPEVPKGVYMWGGVGRGKSFLMDSFYTC
VPVVRKTRLHFHEFMREVHRQLEELRGRPDPLDELAKRIARRYRLICFDEFHVSDVADAMMLHRLLQQMFENGVQFVMTS
NYRPDLLYPDGLHRDRVLPAIALLQQKLDVLNVDAGIDYRKRALEQVEAYHTPLDAKANSALRDAFTSIAGVADESPVLH
IEHRELRALRKANGVVWFDFATLCGGPRSQNDYLELASQFHTVILSDVPRMTPRMSSEARRFTWLIDVFYDHKVKLLMSA
EVPADELYVEGQMASEFHRTVSRIIEMQSREYLESERRTMDTSLT

Sequences:

>Translated_365_residues
MNVSEYYEKELKERGYHSDEAQLRAVARLQQCYDEWVAYKSRRSNAIRKLLVHPEVPKGVYMWGGVGRGKSFLMDSFYTC
VPVVRKTRLHFHEFMREVHRQLEELRGRPDPLDELAKRIARRYRLICFDEFHVSDVADAMMLHRLLQQMFENGVQFVMTS
NYRPDLLYPDGLHRDRVLPAIALLQQKLDVLNVDAGIDYRKRALEQVEAYHTPLDAKANSALRDAFTSIAGVADESPVLH
IEHRELRALRKANGVVWFDFATLCGGPRSQNDYLELASQFHTVILSDVPRMTPRMSSEARRFTWLIDVFYDHKVKLLMSA
EVPADELYVEGQMASEFHRTVSRIIEMQSREYLESERRTMDTSLT
>Mature_365_residues
MNVSEYYEKELKERGYHSDEAQLRAVARLQQCYDEWVAYKSRRSNAIRKLLVHPEVPKGVYMWGGVGRGKSFLMDSFYTC
VPVVRKTRLHFHEFMREVHRQLEELRGRPDPLDELAKRIARRYRLICFDEFHVSDVADAMMLHRLLQQMFENGVQFVMTS
NYRPDLLYPDGLHRDRVLPAIALLQQKLDVLNVDAGIDYRKRALEQVEAYHTPLDAKANSALRDAFTSIAGVADESPVLH
IEHRELRALRKANGVVWFDFATLCGGPRSQNDYLELASQFHTVILSDVPRMTPRMSSEARRFTWLIDVFYDHKVKLLMSA
EVPADELYVEGQMASEFHRTVSRIIEMQSREYLESERRTMDTSLT

Specific function: Unknown

COG id: COG1485

COG function: function code R; Predicted ATPase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AFG1 ATPase family [H]

Homologues:

Organism=Homo sapiens, GI21918872, Length=404, Percent_Identity=33.9108910891089, Blast_Score=228, Evalue=5e-60,
Organism=Escherichia coli, GI1789627, Length=363, Percent_Identity=45.1790633608815, Blast_Score=298, Evalue=5e-82,
Organism=Caenorhabditis elegans, GI17505769, Length=420, Percent_Identity=31.4285714285714, Blast_Score=207, Evalue=5e-54,
Organism=Saccharomyces cerevisiae, GI6320783, Length=325, Percent_Identity=33.2307692307692, Blast_Score=171, Evalue=2e-43,
Organism=Drosophila melanogaster, GI20129913, Length=420, Percent_Identity=31.9047619047619, Blast_Score=194, Evalue=1e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005654 [H]

Pfam domain/function: PF03969 AFG1_ATPase [H]

EC number: NA

Molecular weight: Translated: 42605; Mature: 42605

Theoretical pI: Translated: 7.22; Mature: 7.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVSEYYEKELKERGYHSDEAQLRAVARLQQCYDEWVAYKSRRSNAIRKLLVHPEVPKGV
CCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCE
YMWGGVGRGKSFLMDSFYTCVPVVRKTRLHFHEFMREVHRQLEELRGRPDPLDELAKRIA
EEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
RRYRLICFDEFHVSDVADAMMLHRLLQQMFENGVQFVMTSNYRPDLLYPDGLHRDRVLPA
HHHHHHEEEHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHHHH
IALLQQKLDVLNVDAGIDYRKRALEQVEAYHTPLDAKANSALRDAFTSIAGVADESPVLH
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCEEE
IEHRELRALRKANGVVWFDFATLCGGPRSQNDYLELASQFHTVILSDVPRMTPRMSSEAR
ECHHHHHHHHHHCCEEEEEHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
RFTWLIDVFYDHKVKLLMSAEVPADELYVEGQMASEFHRTVSRIIEMQSREYLESERRTM
HHHHHHHHHHCCCEEEEEECCCCHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DTSLT
HCCCC
>Mature Secondary Structure
MNVSEYYEKELKERGYHSDEAQLRAVARLQQCYDEWVAYKSRRSNAIRKLLVHPEVPKGV
CCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCE
YMWGGVGRGKSFLMDSFYTCVPVVRKTRLHFHEFMREVHRQLEELRGRPDPLDELAKRIA
EEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
RRYRLICFDEFHVSDVADAMMLHRLLQQMFENGVQFVMTSNYRPDLLYPDGLHRDRVLPA
HHHHHHEEEHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHHHH
IALLQQKLDVLNVDAGIDYRKRALEQVEAYHTPLDAKANSALRDAFTSIAGVADESPVLH
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCEEE
IEHRELRALRKANGVVWFDFATLCGGPRSQNDYLELASQFHTVILSDVPRMTPRMSSEAR
ECHHHHHHHHHHCCEEEEEHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
RFTWLIDVFYDHKVKLLMSAEVPADELYVEGQMASEFHRTVSRIIEMQSREYLESERRTM
HHHHHHHHHHCCCEEEEEECCCCHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DTSLT
HCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]