Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
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Accession | NC_007347 |
Length | 3,806,533 |
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The map label for this gene is 73540117
Identifier: 73540117
GI number: 73540117
Start: 449463
End: 450962
Strand: Direct
Name: 73540117
Synonym: Reut_A0411
Alternate gene names: NA
Gene position: 449463-450962 (Clockwise)
Preceding gene: 73540111
Following gene: 73540120
Centisome position: 11.81
GC content: 62.93
Gene sequence:
>1500_bases ATGACTGCATTCGGAACAATTGCTGCGTCGCAGCAATCGGCGGTAGACATGTCATGTCGCCTTGGCTATGCTTCGACCGC CCACGGCCCGGCGTTCCGGCCGGCGCTAGCCGAATTTCCACCCATGCGTTTCCCATTCCCGGCCGCGATGCCGCGCCCGA TCCTTTCCAGCTGTTTCGCTGCGATGCTGTCGCTGACAGCGTGCGCGCCGGCGCTGGCGCAGGACCTGGCGCCAGCGGCC GGAACGGATGTGATGGAGACCGAAAACCCGTTCGGCTTCCATGGTCAGGCCACCTATGTCTGGCAGCGCAAGCCCGCGTT CAACGCCGCCTATTCGGGGCCCAACAGTCTGGGCACGGATCGCGCGAAGGGTTATTCCTTCACGAGCACGCTGGACCTAG GTCTGCGCCTGTGGGACGGTGCGGAGTTCCACCTCAACCCGGAAGTGGCGCAAGGCGTCCCGTTCTCGGGGCTGCACGGC ATGGCCGGCTTGACAAATGGCGAACTTGCCAAGGGCGCGAGCACGAACCCCGTCTTCTACCGTGCGCGCGCATTCATCCG GCAGACCTGGGGCCTTGGCGGAGACACGGAAAAGCTCGACGACGATTTCAACCAGTTCGCCCGAACCGTCGACAAGCGCC GCGTGGTACTGACCGCCGGCAACTTTGGCGTGCTCGACGTGTTCGACCAGAACGACTACGGTTCCGACCCGCGTACGCAG TTCATGAACTGGTCATTTCTGACCCATGGCGCGTGGGACTACGCGGCAGATTCACGCGGCTACACGTGGGGCGTGGCACT CGAATACATCGGCGACGACTGGTCCGCGCGCATCGGCCGCTTCCTGCAGCCGCTCGAGTCCAACGGGCTCGAACTCGACA CGCGGATGTTCGAACACTACGGCGACGTGCTCGAACTCGAAAAGCGCTACAAGTTGTACGACCGGCCTGGCACGGCTCGC CTGCTGTTCTTCCGCAACAAGGCGCGCATGGGCGCGTTCAACGACGCGATCCGGTTCGGTCAGGCCAACAACATCACGCC CGATGTCGCGGACGTGCGGCAGGAACACGCCAAGGTCGGCGTGGGGCTGACGCTGTTGCAGCAGGTCAATGATTCGCTGG GGGTGTTCTTCCGGGCCAGCATGTCGGACGACAAGACCGAGACCTATGCCTTCACCGAGATCGGGCGGCAGGTTTCGTTC GGAGGGGTGTTGAACGGCAGCTCATGGGGCCGTGCGCGCGATGCGGTGGGCGTGGCGTTTGCAGTCAATATGCTGGGACA GAATCACCGGGCTTATCTTGCCGCTGGCGGGCAGGGCGCGTTTTTGGGTGATGGGACGCTGAACTATGCGCCTGAGCAGG TGTTCGAGATCTATTACAGCTTCCAGCCGTTCAAGTACCTGAGTATCAGCCCGGATTTCCAGTATGTGCGCAATCCTGGC TACAACGCCGACCGCGGGCCGGCGAAGTTCTACGGGATCCGGTTTCACGCCGAGTTTTGA
Upstream 100 bases:
>100_bases GGGCGAATCAGGATCTCAACCAGCGAAAGCATTCCCTCGATGGATATTAATTTTCGAGTTAATTAATTCAAGACTTGTTA CAACGTTGAACTTGCGGCAC
Downstream 100 bases:
>100_bases GGGGTGTTGGCGCGAGCCACACACGCCAACACCATCCGGCACCTCAGATTCCCTTACTGCCTTGCGTTCCTGAGATTATC CGGCCAGGGCGTATTGAAGT
Product: hypothetical protein
Products: NA
Alternate protein names: OmpA-Like Transmembrane Domain-Containing Protein; Carbohydrate-Selective Porin Oprb; OmpA-Like Transmembrane Domain Protein; OmpA Domain-Containing Protein; Outer Membrane Protein A-Like; Carbohydrate-Selective Porin
Number of amino acids: Translated: 499; Mature: 498
Protein sequence:
>499_residues MTAFGTIAASQQSAVDMSCRLGYASTAHGPAFRPALAEFPPMRFPFPAAMPRPILSSCFAAMLSLTACAPALAQDLAPAA GTDVMETENPFGFHGQATYVWQRKPAFNAAYSGPNSLGTDRAKGYSFTSTLDLGLRLWDGAEFHLNPEVAQGVPFSGLHG MAGLTNGELAKGASTNPVFYRARAFIRQTWGLGGDTEKLDDDFNQFARTVDKRRVVLTAGNFGVLDVFDQNDYGSDPRTQ FMNWSFLTHGAWDYAADSRGYTWGVALEYIGDDWSARIGRFLQPLESNGLELDTRMFEHYGDVLELEKRYKLYDRPGTAR LLFFRNKARMGAFNDAIRFGQANNITPDVADVRQEHAKVGVGLTLLQQVNDSLGVFFRASMSDDKTETYAFTEIGRQVSF GGVLNGSSWGRARDAVGVAFAVNMLGQNHRAYLAAGGQGAFLGDGTLNYAPEQVFEIYYSFQPFKYLSISPDFQYVRNPG YNADRGPAKFYGIRFHAEF
Sequences:
>Translated_499_residues MTAFGTIAASQQSAVDMSCRLGYASTAHGPAFRPALAEFPPMRFPFPAAMPRPILSSCFAAMLSLTACAPALAQDLAPAA GTDVMETENPFGFHGQATYVWQRKPAFNAAYSGPNSLGTDRAKGYSFTSTLDLGLRLWDGAEFHLNPEVAQGVPFSGLHG MAGLTNGELAKGASTNPVFYRARAFIRQTWGLGGDTEKLDDDFNQFARTVDKRRVVLTAGNFGVLDVFDQNDYGSDPRTQ FMNWSFLTHGAWDYAADSRGYTWGVALEYIGDDWSARIGRFLQPLESNGLELDTRMFEHYGDVLELEKRYKLYDRPGTAR LLFFRNKARMGAFNDAIRFGQANNITPDVADVRQEHAKVGVGLTLLQQVNDSLGVFFRASMSDDKTETYAFTEIGRQVSF GGVLNGSSWGRARDAVGVAFAVNMLGQNHRAYLAAGGQGAFLGDGTLNYAPEQVFEIYYSFQPFKYLSISPDFQYVRNPG YNADRGPAKFYGIRFHAEF >Mature_498_residues TAFGTIAASQQSAVDMSCRLGYASTAHGPAFRPALAEFPPMRFPFPAAMPRPILSSCFAAMLSLTACAPALAQDLAPAAG TDVMETENPFGFHGQATYVWQRKPAFNAAYSGPNSLGTDRAKGYSFTSTLDLGLRLWDGAEFHLNPEVAQGVPFSGLHGM AGLTNGELAKGASTNPVFYRARAFIRQTWGLGGDTEKLDDDFNQFARTVDKRRVVLTAGNFGVLDVFDQNDYGSDPRTQF MNWSFLTHGAWDYAADSRGYTWGVALEYIGDDWSARIGRFLQPLESNGLELDTRMFEHYGDVLELEKRYKLYDRPGTARL LFFRNKARMGAFNDAIRFGQANNITPDVADVRQEHAKVGVGLTLLQQVNDSLGVFFRASMSDDKTETYAFTEIGRQVSFG GVLNGSSWGRARDAVGVAFAVNMLGQNHRAYLAAGGQGAFLGDGTLNYAPEQVFEIYYSFQPFKYLSISPDFQYVRNPGY NADRGPAKFYGIRFHAEF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54967; Mature: 54836
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: PS00678 WD_REPEATS_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAFGTIAASQQSAVDMSCRLGYASTAHGPAFRPALAEFPPMRFPFPAAMPRPILSSCFA CCCCCCCCCCCCHHHCHHEECCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHH AMLSLTACAPALAQDLAPAAGTDVMETENPFGFHGQATYVWQRKPAFNAAYSGPNSLGTD HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCC RAKGYSFTSTLDLGLRLWDGAEFHLNPEVAQGVPFSGLHGMAGLTNGELAKGASTNPVFY CCCCCEEEEEHCCCEEEECCCEEEECHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH RARAFIRQTWGLGGDTEKLDDDFNQFARTVDKRRVVLTAGNFGVLDVFDQNDYGSDPRTQ HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCEEEEEECCCCEEEEECCCCCCCCCHHH FMNWSFLTHGAWDYAADSRGYTWGVALEYIGDDWSARIGRFLQPLESNGLELDTRMFEHY HEEEEEEECCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHH GDVLELEKRYKLYDRPGTARLLFFRNKARMGAFNDAIRFGQANNITPDVADVRQEHAKVG CHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHC VGLTLLQQVNDSLGVFFRASMSDDKTETYAFTEIGRQVSFGGVLNGSSWGRARDAVGVAF HHHHHHHHHCCCCCEEEEECCCCCCCCEEEHHHHCCEEECCEEECCCCCCCHHHHHHHHH AVNMLGQNHRAYLAAGGQGAFLGDGTLNYAPEQVFEIYYSFQPFKYLSISPDFQYVRNPG HHHHHCCCCEEEEEECCCCEEECCCCCCCCHHHHHHHHHCCCCEEEEEECCCHHHHCCCC YNADRGPAKFYGIRFHAEF CCCCCCCCEEEEEEEEECC >Mature Secondary Structure TAFGTIAASQQSAVDMSCRLGYASTAHGPAFRPALAEFPPMRFPFPAAMPRPILSSCFA CCCCCCCCCCCHHHCHHEECCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHH AMLSLTACAPALAQDLAPAAGTDVMETENPFGFHGQATYVWQRKPAFNAAYSGPNSLGTD HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCC RAKGYSFTSTLDLGLRLWDGAEFHLNPEVAQGVPFSGLHGMAGLTNGELAKGASTNPVFY CCCCCEEEEEHCCCEEEECCCEEEECHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH RARAFIRQTWGLGGDTEKLDDDFNQFARTVDKRRVVLTAGNFGVLDVFDQNDYGSDPRTQ HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCEEEEEECCCCEEEEECCCCCCCCCHHH FMNWSFLTHGAWDYAADSRGYTWGVALEYIGDDWSARIGRFLQPLESNGLELDTRMFEHY HEEEEEEECCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHH GDVLELEKRYKLYDRPGTARLLFFRNKARMGAFNDAIRFGQANNITPDVADVRQEHAKVG CHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHC VGLTLLQQVNDSLGVFFRASMSDDKTETYAFTEIGRQVSFGGVLNGSSWGRARDAVGVAF HHHHHHHHHCCCCCEEEEECCCCCCCCEEEHHHHCCEEECCEEECCCCCCCHHHHHHHHH AVNMLGQNHRAYLAAGGQGAFLGDGTLNYAPEQVFEIYYSFQPFKYLSISPDFQYVRNPG HHHHHCCCCEEEEEECCCCEEECCCCCCCCHHHHHHHHHCCCCEEEEEECCCHHHHCCCC YNADRGPAKFYGIRFHAEF CCCCCCCCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA