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The map label for this gene is regB [H]

Identifier: 73539879

GI number: 73539879

Start: 199228

End: 200583

Strand: Reverse

Name: regB [H]

Synonym: Reut_A0173

Alternate gene names: 73539879

Gene position: 200583-199228 (Counterclockwise)

Preceding gene: 73539881

Following gene: 73539878

Centisome position: 5.27

GC content: 68.51

Gene sequence:

>1356_bases
ATGCATGCCGCTCCTGCCGTGTCCCATCCGCCAGCTTTCACCGCTTCGCCGCCGCTTCCGGCCGGACCCGCCGCGCGTCC
TAGCCTGGTGAGCCTGCGACGCCTGTTCTGGCTGCGCTGGGCGCTGCTGGCCGGGCAGGCACTGTGCCTGCTGTCGTGCG
AGCCGATCATTGGTGTCACGCTGCCGACGGGCCCGCTGCTGGTCGTCTTTGCGCTGCAGGCGCTGTTCAACGTGCTGACC
GGCCTGCGCCTGCGGCTGCACACGCGGCACGGCTCGTTGCCGGGCGAAGCGGAGCTGATGGGCCAGTTGCTGGTCGACCT
GACCGCGCTATCGGCGATCCTGTTCTATACCGGCGGCGCCACCAACCCGTTCGTGTCGTTCTACCTGCCGGGGCTCGCCA
TCGCAGCCGCGATCCTGCCGTGGCGGCAGGTGATCGCGCTGGCGTGCTTCGCGCTGGCCTGCTACACGGTGCTGCTGTTC
GAGTACCTGCCGCTGGATCTGCACGATCCGGACAAGGCCGTGAACTATCACCTCGCCGGCATGTGGCTCAATTTCGTGGC
CAGCGCAGTGATGATCGCTCTGTTCGTGGCGCGGCTTTCCGGCGTGCTGCGCCAGCGCGAGGCGCAACTGCACCTGGCGC
GCGAACAGCTGTTGCGTGAAGCGCGCGTGGAAGACCTCAATGCCCAGGCGGCAGCCGTGGCCCACGAGATCGGCACGCCG
CTGGCAACGCTGGCGGTCATTGCCGGCGAACTGCGCGCCGATGCCTCGGACCGCGCGCGCAGCGGCACGCCAGTGGCCGA
TTACCTCCCGGACCTGCTGACCGTCGAGCAGCAACTGGAATTGTGCCGAACCATCCTGGCGCGGCTACGCGAGGATCCTG
CCACGCTCGAGCCCGAGCGCATCGACGCATGGCTTGGCAGCTTTGCGGAGCGCTGGCAACTGCGTCATCCCAATGCCACG
TTGCAGGCCAACGCCACTGCACAGGCTGGTGCACTGGCCATCGAACCGGCACGCGTGGGACAGATCCTGACCATCCTGCT
GGATAACGCCGCGCGCAGCCAGCAATCGGCCGGGCATGCGCAACGGCCGCTGCAACTGGAAATCGCCTTCGAGCAGGGCA
ATATCGCCTTCCGCGTGAGCGACCACGGCGACGGCATTCCGCCCGAACTGCGTTCGCAGCTTGGCGAGACTCCCGTGGTC
AGCCCGCACGGCGGCCAGGGCATCGGCCTGTACCTCGCGCAGAGCGGCGCGCGGCAGATGGGCGGCGGACTCGCGTGGCG
CGATCGCCCCGGCGGCGGCACGATCGCCGAATTGCGTGTGCCGTCCTCCCCTTCGCTGGCAGTCAATCCGTCATGA

Upstream 100 bases:

>100_bases
TGCAGATAACCGGATAGTCTGGAGCCGAAGCGCCACGTGACCAATGCGGCAAGGTGTCGCACATGCCGGAGCGCTCCGGC
CGCATTGATACACTCGCGGC

Downstream 100 bases:

>100_bases
CCGTTATGACCGTTACCCACCACCCGGTTCCCGAATCCACCGCGCCGGCCGGCACGCCCTTCCTGGTCATCGACGATGAT
GCTGTGTTCTCCGGCACGCT

Product: sensor histidine kinase

Products: NA

Alternate protein names: Protein prrB [H]

Number of amino acids: Translated: 451; Mature: 451

Protein sequence:

>451_residues
MHAAPAVSHPPAFTASPPLPAGPAARPSLVSLRRLFWLRWALLAGQALCLLSCEPIIGVTLPTGPLLVVFALQALFNVLT
GLRLRLHTRHGSLPGEAELMGQLLVDLTALSAILFYTGGATNPFVSFYLPGLAIAAAILPWRQVIALACFALACYTVLLF
EYLPLDLHDPDKAVNYHLAGMWLNFVASAVMIALFVARLSGVLRQREAQLHLAREQLLREARVEDLNAQAAAVAHEIGTP
LATLAVIAGELRADASDRARSGTPVADYLPDLLTVEQQLELCRTILARLREDPATLEPERIDAWLGSFAERWQLRHPNAT
LQANATAQAGALAIEPARVGQILTILLDNAARSQQSAGHAQRPLQLEIAFEQGNIAFRVSDHGDGIPPELRSQLGETPVV
SPHGGQGIGLYLAQSGARQMGGGLAWRDRPGGGTIAELRVPSSPSLAVNPS

Sequences:

>Translated_451_residues
MHAAPAVSHPPAFTASPPLPAGPAARPSLVSLRRLFWLRWALLAGQALCLLSCEPIIGVTLPTGPLLVVFALQALFNVLT
GLRLRLHTRHGSLPGEAELMGQLLVDLTALSAILFYTGGATNPFVSFYLPGLAIAAAILPWRQVIALACFALACYTVLLF
EYLPLDLHDPDKAVNYHLAGMWLNFVASAVMIALFVARLSGVLRQREAQLHLAREQLLREARVEDLNAQAAAVAHEIGTP
LATLAVIAGELRADASDRARSGTPVADYLPDLLTVEQQLELCRTILARLREDPATLEPERIDAWLGSFAERWQLRHPNAT
LQANATAQAGALAIEPARVGQILTILLDNAARSQQSAGHAQRPLQLEIAFEQGNIAFRVSDHGDGIPPELRSQLGETPVV
SPHGGQGIGLYLAQSGARQMGGGLAWRDRPGGGTIAELRVPSSPSLAVNPS
>Mature_451_residues
MHAAPAVSHPPAFTASPPLPAGPAARPSLVSLRRLFWLRWALLAGQALCLLSCEPIIGVTLPTGPLLVVFALQALFNVLT
GLRLRLHTRHGSLPGEAELMGQLLVDLTALSAILFYTGGATNPFVSFYLPGLAIAAAILPWRQVIALACFALACYTVLLF
EYLPLDLHDPDKAVNYHLAGMWLNFVASAVMIALFVARLSGVLRQREAQLHLAREQLLREARVEDLNAQAAAVAHEIGTP
LATLAVIAGELRADASDRARSGTPVADYLPDLLTVEQQLELCRTILARLREDPATLEPERIDAWLGSFAERWQLRHPNAT
LQANATAQAGALAIEPARVGQILTILLDNAARSQQSAGHAQRPLQLEIAFEQGNIAFRVSDHGDGIPPELRSQLGETPVV
SPHGGQGIGLYLAQSGARQMGGGLAWRDRPGGGTIAELRVPSSPSLAVNPS

Specific function: Member of the two-component regulatory system RegB/RegA. Involved in the positive regulation of photosynthesis gene expression in response to anaerobiosis. Also involved in positive regulation of the cbbI and cbbII Calvin cycle CO2 fixation operons, as we

COG id: COG0642

COG function: function code T; Signal transduction histidine kinase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 48242; Mature: 48242

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHAAPAVSHPPAFTASPPLPAGPAARPSLVSLRRLFWLRWALLAGQALCLLSCEPIIGVT
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCCEEEE
LPTGPLLVVFALQALFNVLTGLRLRLHTRHGSLPGEAELMGQLLVDLTALSAILFYTGGA
CCCCHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
TNPFVSFYLPGLAIAAAILPWRQVIALACFALACYTVLLFEYLPLDLHDPDKAVNYHLAG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
MWLNFVASAVMIALFVARLSGVLRQREAQLHLAREQLLREARVEDLNAQAAAVAHEIGTP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCH
LATLAVIAGELRADASDRARSGTPVADYLPDLLTVEQQLELCRTILARLREDPATLEPER
HHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
IDAWLGSFAERWQLRHPNATLQANATAQAGALAIEPARVGQILTILLDNAARSQQSAGHA
HHHHHHHHHHHHCCCCCCCEEEECCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHCCCC
QRPLQLEIAFEQGNIAFRVSDHGDGIPPELRSQLGETPVVSPHGGQGIGLYLAQSGARQM
CCCEEEEEEEECCCEEEEECCCCCCCCHHHHHHCCCCCCCCCCCCCCEEEEEECCCHHHH
GGGLAWRDRPGGGTIAELRVPSSPSLAVNPS
CCCCCCCCCCCCCCEEEEECCCCCCEECCCC
>Mature Secondary Structure
MHAAPAVSHPPAFTASPPLPAGPAARPSLVSLRRLFWLRWALLAGQALCLLSCEPIIGVT
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCCEEEE
LPTGPLLVVFALQALFNVLTGLRLRLHTRHGSLPGEAELMGQLLVDLTALSAILFYTGGA
CCCCHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
TNPFVSFYLPGLAIAAAILPWRQVIALACFALACYTVLLFEYLPLDLHDPDKAVNYHLAG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
MWLNFVASAVMIALFVARLSGVLRQREAQLHLAREQLLREARVEDLNAQAAAVAHEIGTP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCH
LATLAVIAGELRADASDRARSGTPVADYLPDLLTVEQQLELCRTILARLREDPATLEPER
HHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
IDAWLGSFAERWQLRHPNATLQANATAQAGALAIEPARVGQILTILLDNAARSQQSAGHA
HHHHHHHHHHHHCCCCCCCEEEECCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHCCCC
QRPLQLEIAFEQGNIAFRVSDHGDGIPPELRSQLGETPVVSPHGGQGIGLYLAQSGARQM
CCCEEEEEEEECCCEEEEECCCCCCCCHHHHHHCCCCCCCCCCCCCCEEEEEECCCHHHH
GGGLAWRDRPGGGTIAELRVPSSPSLAVNPS
CCCCCCCCCCCCCCEEEEECCCCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7751278; 10358089 [H]