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The map label for this gene is regA [H]

Identifier: 73539878

GI number: 73539878

Start: 198611

End: 199231

Strand: Reverse

Name: regA [H]

Synonym: Reut_A0172

Alternate gene names: 73539878

Gene position: 199231-198611 (Counterclockwise)

Preceding gene: 73539879

Following gene: 73539876

Centisome position: 5.23

GC content: 68.44

Gene sequence:

>621_bases
ATGACCGTTATGACCGTTACCCACCACCCGGTTCCCGAATCCACCGCGCCGGCCGGCACGCCCTTCCTGGTCATCGACGA
TGATGCTGTGTTCTCCGGCACGCTGGCCCGCGCGCTGACACGTCGGGGCTACGCCGTGCAGGTCGCGCACAACAGCAGCA
CGGCGCTGGCATTGGCTGCGCGTACGGCGTTCGCCTATGTCACGCTGGATCTGCACCTCGGCCCGCCCCCCGAAGCGGGT
AGTACCGCACCGGCCGAATCGGGGCTGCAACTGGTCGGGCCGCTGCGCCAGTCGCTGCCGGACGCGCGCATCCTGGTGCT
GACTGGCTACGCGAGCATTGCCACTGCCGTGGCGGCGGTCAAGCAAGGGGCCGACGAATACCTGGCCAAGCCGGCGAACG
TGGATTCGATCCTCACGGCCCTGATGGCGGGGATCTCGGAAGATGCAGCGGAAGCCGCGATGGAAGAGCCGGTGCCCCTG
TCGGTGGCCAGGCTCGAATGGGAGCACATCCAGCGCGTGCTCAACGAGCACGGCGGCAATATCTCCGCGACCGCGCGCGC
GCTCAACATGCACCGGCGCACGCTGCAGCGCAAGCTGGGCAAGCGCCCGGTATCGCGCTGA

Upstream 100 bases:

>100_bases
GGCAGATGGGCGGCGGACTCGCGTGGCGCGATCGCCCCGGCGGCGGCACGATCGCCGAATTGCGTGTGCCGTCCTCCCCT
TCGCTGGCAGTCAATCCGTC

Downstream 100 bases:

>100_bases
CGGCGCTGGCCGTACGGATGTGGATTACAGCCGCAGCTGCACGTAGTCCCATTCCAGCGCATCGCTGGCTCCGTCCGGCT
TGTCTTGCCGCGCGACCACG

Product: helix-turn-helix, Fis-type

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 206; Mature: 205

Protein sequence:

>206_residues
MTVMTVTHHPVPESTAPAGTPFLVIDDDAVFSGTLARALTRRGYAVQVAHNSSTALALAARTAFAYVTLDLHLGPPPEAG
STAPAESGLQLVGPLRQSLPDARILVLTGYASIATAVAAVKQGADEYLAKPANVDSILTALMAGISEDAAEAAMEEPVPL
SVARLEWEHIQRVLNEHGGNISATARALNMHRRTLQRKLGKRPVSR

Sequences:

>Translated_206_residues
MTVMTVTHHPVPESTAPAGTPFLVIDDDAVFSGTLARALTRRGYAVQVAHNSSTALALAARTAFAYVTLDLHLGPPPEAG
STAPAESGLQLVGPLRQSLPDARILVLTGYASIATAVAAVKQGADEYLAKPANVDSILTALMAGISEDAAEAAMEEPVPL
SVARLEWEHIQRVLNEHGGNISATARALNMHRRTLQRKLGKRPVSR
>Mature_205_residues
TVMTVTHHPVPESTAPAGTPFLVIDDDAVFSGTLARALTRRGYAVQVAHNSSTALALAARTAFAYVTLDLHLGPPPEAGS
TAPAESGLQLVGPLRQSLPDARILVLTGYASIATAVAAVKQGADEYLAKPANVDSILTALMAGISEDAAEAAMEEPVPLS
VARLEWEHIQRVLNEHGGNISATARALNMHRRTLQRKLGKRPVSR

Specific function: Member of the two-component regulatory system regB/regA. Involved in transactivating anaerobic expression of the photosynthetic apparatus. It is a transcriptional regulator that is responsible for activating expression of the puf, puh, and puc operons in

COG id: COG4567

COG function: function code TK; Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001789 [H]

Pfam domain/function: PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 21713; Mature: 21582

Theoretical pI: Translated: 7.26; Mature: 7.26

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVMTVTHHPVPESTAPAGTPFLVIDDDAVFSGTLARALTRRGYAVQVAHNSSTALALAA
CEEEEEECCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCCHHHHHH
RTAFAYVTLDLHLGPPPEAGSTAPAESGLQLVGPLRQSLPDARILVLTGYASIATAVAAV
HHEEEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHH
KQGADEYLAKPANVDSILTALMAGISEDAAEAAMEEPVPLSVARLEWEHIQRVLNEHGGN
HHCHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCC
ISATARALNMHRRTLQRKLGKRPVSR
CHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TVMTVTHHPVPESTAPAGTPFLVIDDDAVFSGTLARALTRRGYAVQVAHNSSTALALAA
EEEEEECCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCCHHHHHH
RTAFAYVTLDLHLGPPPEAGSTAPAESGLQLVGPLRQSLPDARILVLTGYASIATAVAAV
HHEEEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHH
KQGADEYLAKPANVDSILTALMAGISEDAAEAAMEEPVPLSVARLEWEHIQRVLNEHGGN
HHCHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCC
ISATARALNMHRRTLQRKLGKRPVSR
CHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1547494 [H]