| Definition | Ralstonia eutropha JMP134 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_007348 |
| Length | 2,726,152 |
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The map label for this gene is frc [H]
Identifier: 73538495
GI number: 73538495
Start: 1363812
End: 1365044
Strand: Reverse
Name: frc [H]
Synonym: Reut_B4669
Alternate gene names: 73538495
Gene position: 1365044-1363812 (Counterclockwise)
Preceding gene: 73538496
Following gene: 73538494
Centisome position: 50.07
GC content: 65.29
Gene sequence:
>1233_bases ATGGAACGAAAAGCACTGGATGGCATCCGTGTTCTGGACATGACGCACGTTCAGGCAGGCCCTTCCGCCACGCAGCTGAT GGCATGGATGGGCGCCGACGTGATCAAGGTGGAAATGCCGGGCCGCGGGGATATTACCCGCAGCCAGCTGCGCGACGTGC CCAACGCCGACAGCCTGTACTTCACCATGCTCAACAGCAACAAGCGCAGCCTCACGCTGAACATGAAGACGGCGGAAGGC AAGGCGTTGCTCGAAGACCTGATCCAGCGCAGCGACGTGCTGATCGAGAACTTCGGCCCTGGCGTGCTCGCACGTGCGGG TTTCGACTGGGACCGCATGCAGGACCTGAACCCGCGCCTGATCTATGCATCGATCAAGGGTTTCGGCCCCGGTCCGTACC AGGACTGCAAGGCCTATGAAAATGTGGCCCAGTGTATGGGCGGCTCGGCCTCCACGACCGGCGATGCCGCAGGCGTGCCG ACCGTGACCGGTGCGCAGATCGGCGATTCGGGTACCGGCGTGCATTGCGTGGTCGGCATCCTGGCTGCGCTGCTGCAACG CGAGCATTCGGGCCGCGGCCAGCGCGTGGAAGTGGCCATGCAGGATGCGGTGCTGAACCTGTGCCGCGTGAAGCTGCGCG ACCAGCAACGGCTCGATGCGGGCCCGCTGCGCGAGTACCCCAACGAGCAGTTCGACGACCACGTGCCCCGCGCCGGCAAC GCATCAGGCGGCGGCCAGCCTGGCGCCGCGCTGCGCTGCTCGCCCGGCGGCCCGAACGACTATGTCTACGTCATCATCCA GCCGCAGGGCTGGGAGCCGCTGATGCGCCTGTGCGGCCGCGAAGATCTGATCACCGATCCGGAGTTCGCCTCGCCCGAGG TGCGCCTGAAGAAGCTCGGCGAATGCTTCGGCATCATCGAGCAGTGGACCATGGGACTGACGAAGTTCGAGGTGATGAAC GCGCTCAACGAGGTCGATGTGCCGTGCGGTCCGATCCTGTCGATGAAGGACCTGATCGAGGACCAGTCGATGTACGACCG CGGCTATCTGGTGGAGCTGGAGCACCCGACGCGCGGCAAGTACGTGCAGCTCGGTTCGCCGATTGCACTGTCCGATTCTC CGGTAAAGGTGGAACGTGCCCCGCTGCTGGGCGAGCACACCGAGGAAATCCTCGAGTGGCTGGGCCGCACGCCAGCCCAG ATCGCCGCGATGAAGCTGGCCGGCGCCGTCTGA
Upstream 100 bases:
>100_bases CCGAAGTCCACGCGAAGCGCGCCGAAAGCCGTACCGCGGAAAACACCCTGAAGACCCTGTACCAGTAAACAGACGCCATC GGAACCGAGGAGACATCGCC
Downstream 100 bases:
>100_bases GCGTCCGCCTTCCTCTCCTCTTCTTCCCCTGTTTCTCACACCGAGCGGGCGCGCCTGGCGCGTGCCCGCCGGAGGAGTTC GTGCTGTGAAATCCTGGATT
Product: formyl-coenzyme A transferase
Products: NA
Alternate protein names: Formyl-CoA transferase [H]
Number of amino acids: Translated: 410; Mature: 410
Protein sequence:
>410_residues MERKALDGIRVLDMTHVQAGPSATQLMAWMGADVIKVEMPGRGDITRSQLRDVPNADSLYFTMLNSNKRSLTLNMKTAEG KALLEDLIQRSDVLIENFGPGVLARAGFDWDRMQDLNPRLIYASIKGFGPGPYQDCKAYENVAQCMGGSASTTGDAAGVP TVTGAQIGDSGTGVHCVVGILAALLQREHSGRGQRVEVAMQDAVLNLCRVKLRDQQRLDAGPLREYPNEQFDDHVPRAGN ASGGGQPGAALRCSPGGPNDYVYVIIQPQGWEPLMRLCGREDLITDPEFASPEVRLKKLGECFGIIEQWTMGLTKFEVMN ALNEVDVPCGPILSMKDLIEDQSMYDRGYLVELEHPTRGKYVQLGSPIALSDSPVKVERAPLLGEHTEEILEWLGRTPAQ IAAMKLAGAV
Sequences:
>Translated_410_residues MERKALDGIRVLDMTHVQAGPSATQLMAWMGADVIKVEMPGRGDITRSQLRDVPNADSLYFTMLNSNKRSLTLNMKTAEG KALLEDLIQRSDVLIENFGPGVLARAGFDWDRMQDLNPRLIYASIKGFGPGPYQDCKAYENVAQCMGGSASTTGDAAGVP TVTGAQIGDSGTGVHCVVGILAALLQREHSGRGQRVEVAMQDAVLNLCRVKLRDQQRLDAGPLREYPNEQFDDHVPRAGN ASGGGQPGAALRCSPGGPNDYVYVIIQPQGWEPLMRLCGREDLITDPEFASPEVRLKKLGECFGIIEQWTMGLTKFEVMN ALNEVDVPCGPILSMKDLIEDQSMYDRGYLVELEHPTRGKYVQLGSPIALSDSPVKVERAPLLGEHTEEILEWLGRTPAQ IAAMKLAGAV >Mature_410_residues MERKALDGIRVLDMTHVQAGPSATQLMAWMGADVIKVEMPGRGDITRSQLRDVPNADSLYFTMLNSNKRSLTLNMKTAEG KALLEDLIQRSDVLIENFGPGVLARAGFDWDRMQDLNPRLIYASIKGFGPGPYQDCKAYENVAQCMGGSASTTGDAAGVP TVTGAQIGDSGTGVHCVVGILAALLQREHSGRGQRVEVAMQDAVLNLCRVKLRDQQRLDAGPLREYPNEQFDDHVPRAGN ASGGGQPGAALRCSPGGPNDYVYVIIQPQGWEPLMRLCGREDLITDPEFASPEVRLKKLGECFGIIEQWTMGLTKFEVMN ALNEVDVPCGPILSMKDLIEDQSMYDRGYLVELEHPTRGKYVQLGSPIALSDSPVKVERAPLLGEHTEEILEWLGRTPAQ IAAMKLAGAV
Specific function: Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate [H]
COG id: COG1804
COG function: function code C; Predicted acyl-CoA transferases/carnitine dehydratase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CaiB/BaiF CoA-transferase family [H]
Homologues:
Organism=Homo sapiens, GI300863128, Length=399, Percent_Identity=29.5739348370927, Blast_Score=169, Evalue=4e-42, Organism=Homo sapiens, GI300863124, Length=425, Percent_Identity=28.2352941176471, Blast_Score=155, Evalue=5e-38, Organism=Homo sapiens, GI266456254, Length=407, Percent_Identity=28.7469287469287, Blast_Score=124, Evalue=1e-28, Organism=Homo sapiens, GI42794625, Length=407, Percent_Identity=28.7469287469287, Blast_Score=124, Evalue=2e-28, Organism=Homo sapiens, GI13376042, Length=421, Percent_Identity=25.8907363420428, Blast_Score=114, Evalue=2e-25, Organism=Homo sapiens, GI300863126, Length=152, Percent_Identity=38.1578947368421, Blast_Score=113, Evalue=3e-25, Organism=Homo sapiens, GI266458397, Length=278, Percent_Identity=30.2158273381295, Blast_Score=101, Evalue=1e-21, Organism=Homo sapiens, GI266458393, Length=284, Percent_Identity=29.9295774647887, Blast_Score=100, Evalue=4e-21, Organism=Homo sapiens, GI266458395, Length=126, Percent_Identity=38.0952380952381, Blast_Score=78, Evalue=1e-14, Organism=Homo sapiens, GI42822893, Length=126, Percent_Identity=38.0952380952381, Blast_Score=77, Evalue=3e-14, Organism=Escherichia coli, GI1788717, Length=412, Percent_Identity=54.126213592233, Blast_Score=412, Evalue=1e-116, Organism=Escherichia coli, GI87082093, Length=396, Percent_Identity=33.3333333333333, Blast_Score=183, Evalue=2e-47, Organism=Escherichia coli, GI1786222, Length=345, Percent_Identity=24.9275362318841, Blast_Score=79, Evalue=5e-16, Organism=Drosophila melanogaster, GI24648431, Length=414, Percent_Identity=32.8502415458937, Blast_Score=193, Evalue=2e-49, Organism=Drosophila melanogaster, GI24585488, Length=197, Percent_Identity=29.9492385786802, Blast_Score=83, Evalue=3e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003673 - InterPro: IPR017659 [H]
Pfam domain/function: PF02515 CoA_transf_3 [H]
EC number: =2.8.3.16 [H]
Molecular weight: Translated: 44648; Mature: 44648
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERKALDGIRVLDMTHVQAGPSATQLMAWMGADVIKVEMPGRGDITRSQLRDVPNADSLY CCCCCCCCEEEEEEEECCCCCCHHHHHHHHCCCEEEEECCCCCCCCHHHHHCCCCCCCEE FTMLNSNKRSLTLNMKTAEGKALLEDLIQRSDVLIENFGPGVLARAGFDWDRMQDLNPRL EEEECCCCEEEEEEEECCCHHHHHHHHHHHCCEEEECCCCCEEEECCCCHHHHCCCCCEE IYASIKGFGPGPYQDCKAYENVAQCMGGSASTTGDAAGVPTVTGAQIGDSGTGVHCVVGI EEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH LAALLQREHSGRGQRVEVAMQDAVLNLCRVKLRDQQRLDAGPLREYPNEQFDDHVPRAGN HHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCHHHCCCCCCCC ASGGGQPGAALRCSPGGPNDYVYVIIQPQGWEPLMRLCGREDLITDPEFASPEVRLKKLG CCCCCCCCCEEEECCCCCCCEEEEEEECCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHH ECFGIIEQWTMGLTKFEVMNALNEVDVPCGPILSMKDLIEDQSMYDRGYLVELEHPTRGK HHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCC YVQLGSPIALSDSPVKVERAPLLGEHTEEILEWLGRTPAQIAAMKLAGAV EEECCCCEEECCCCCEEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCC >Mature Secondary Structure MERKALDGIRVLDMTHVQAGPSATQLMAWMGADVIKVEMPGRGDITRSQLRDVPNADSLY CCCCCCCCEEEEEEEECCCCCCHHHHHHHHCCCEEEEECCCCCCCCHHHHHCCCCCCCEE FTMLNSNKRSLTLNMKTAEGKALLEDLIQRSDVLIENFGPGVLARAGFDWDRMQDLNPRL EEEECCCCEEEEEEEECCCHHHHHHHHHHHCCEEEECCCCCEEEECCCCHHHHCCCCCEE IYASIKGFGPGPYQDCKAYENVAQCMGGSASTTGDAAGVPTVTGAQIGDSGTGVHCVVGI EEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH LAALLQREHSGRGQRVEVAMQDAVLNLCRVKLRDQQRLDAGPLREYPNEQFDDHVPRAGN HHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCHHHCCCCCCCC ASGGGQPGAALRCSPGGPNDYVYVIIQPQGWEPLMRLCGREDLITDPEFASPEVRLKKLG CCCCCCCCCEEEECCCCCCCEEEEEEECCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHH ECFGIIEQWTMGLTKFEVMNALNEVDVPCGPILSMKDLIEDQSMYDRGYLVELEHPTRGK HHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCC YVQLGSPIALSDSPVKVERAPLLGEHTEEILEWLGRTPAQIAAMKLAGAV EEECCCCEEECCCCCEEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12000953 [H]