Definition | Ralstonia eutropha JMP134 chromosome chromosome 2, complete sequence. |
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Accession | NC_007348 |
Length | 2,726,152 |
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The map label for this gene is mug [H]
Identifier: 73538309
GI number: 73538309
Start: 1151591
End: 1152184
Strand: Direct
Name: mug [H]
Synonym: Reut_B4482
Alternate gene names: 73538309
Gene position: 1151591-1152184 (Clockwise)
Preceding gene: 73538307
Following gene: 73538310
Centisome position: 42.24
GC content: 64.14
Gene sequence:
>594_bases ATGAAGCATCCACAGCTAGCGCCAACGCATGGACCGTCCGGCCCGTTGCCGGACATCATGAAGCCGGGGCTCTCGGCAGT GTTCTGCGGACTCAATCCCGGGCTGCGGGCTGCGGCGAGCGGCCATCACTTCGCAGGACACGGCAACCGGTTCTGGCGCG TGATTCATCTCGCAGGCATCACCGACCGGGAGCTCGAACCCGTGGACGACCGGCAATTGCTGTCATACGGATACGGTCTG ACAACTGCGGTAAGCCGGCCAACTGCCAGCGCGGCCGCACTCTCCCACAACGAATATGTCGATGCATCGGTGCGCCTGAT CATCAAGCTGGAGCGCTTCCATCCTGCCTGCGTTGCGTTCCTCGGCAAGGCTGCCTATGCGGCCATGACGAGCCAGCGTG TTGTCCCGTGGGGCCCGCAGCGGCGGCGCATGGGCGGCGCAAGGGTCTGGGTGTTGCCCAACCCGAGCGGGCGAAATCGG GCGTTCAGTCTCGCCGGTCTTGTCGACGCGTATGGCGAGTTCCGTGCGTCCGTGGAAAGTCAGATCCGCTACGGGGAGTC CCCACAGTGTGCGGAAGTCGATAGCCTGAAATGA
Upstream 100 bases:
>100_bases CCTATAGTCGGAACACCGCTGCATGCATCTGGTCGATGCCGCAGGCAGCAAGACCTGTCCGGTTACTGGTTGTGCCGGGC GAGCGCCAAGGACAACAGGA
Downstream 100 bases:
>100_bases ACAGGAGGTAAGCGGGATGGTATGGACCACCAACGAGATGGTTGAGCGCGCGACGACGCAGATCAACGATGGGGATTTTG TCTATCTGGGCCCGGGCCTG
Product: G/U mismatch-specific uracil-DNA glycosylase
Products: NA
Alternate protein names: Double-strand-specific uracil glycosylase; Mismatch-specific uracil DNA-glycosylase; MUG [H]
Number of amino acids: Translated: 197; Mature: 197
Protein sequence:
>197_residues MKHPQLAPTHGPSGPLPDIMKPGLSAVFCGLNPGLRAAASGHHFAGHGNRFWRVIHLAGITDRELEPVDDRQLLSYGYGL TTAVSRPTASAAALSHNEYVDASVRLIIKLERFHPACVAFLGKAAYAAMTSQRVVPWGPQRRRMGGARVWVLPNPSGRNR AFSLAGLVDAYGEFRASVESQIRYGESPQCAEVDSLK
Sequences:
>Translated_197_residues MKHPQLAPTHGPSGPLPDIMKPGLSAVFCGLNPGLRAAASGHHFAGHGNRFWRVIHLAGITDRELEPVDDRQLLSYGYGL TTAVSRPTASAAALSHNEYVDASVRLIIKLERFHPACVAFLGKAAYAAMTSQRVVPWGPQRRRMGGARVWVLPNPSGRNR AFSLAGLVDAYGEFRASVESQIRYGESPQCAEVDSLK >Mature_197_residues MKHPQLAPTHGPSGPLPDIMKPGLSAVFCGLNPGLRAAASGHHFAGHGNRFWRVIHLAGITDRELEPVDDRQLLSYGYGL TTAVSRPTASAAALSHNEYVDASVRLIIKLERFHPACVAFLGKAAYAAMTSQRVVPWGPQRRRMGGARVWVLPNPSGRNR AFSLAGLVDAYGEFRASVESQIRYGESPQCAEVDSLK
Specific function: Excises ethenocytosine and uracil, which can arise by alkylation or deamination of cytosine, respectively, from the corresponding mispairs with guanine in ds-DNA. It is capable of hydrolyzing the carbon-nitrogen bond between the sugar-phosphate backbone o
COG id: COG3663
COG function: function code L; G:T/U mismatch-specific DNA glycosylase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TDG/mug DNA glycosylase family [H]
Homologues:
Organism=Homo sapiens, GI59853162, Length=159, Percent_Identity=32.7044025157233, Blast_Score=96, Evalue=3e-20, Organism=Escherichia coli, GI1789449, Length=159, Percent_Identity=47.7987421383648, Blast_Score=150, Evalue=6e-38, Organism=Drosophila melanogaster, GI21356805, Length=185, Percent_Identity=34.0540540540541, Blast_Score=109, Evalue=1e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015637 - InterPro: IPR005122 [H]
Pfam domain/function: PF03167 UDG [H]
EC number: =3.2.2.28 [H]
Molecular weight: Translated: 21326; Mature: 21326
Theoretical pI: Translated: 9.95; Mature: 9.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHPQLAPTHGPSGPLPDIMKPGLSAVFCGLNPGLRAAASGHHFAGHGNRFWRVIHLAGI CCCCCCCCCCCCCCCCCHHHCCCCCEEEECCCCCCHHCCCCCCCCCCCCEEEEEEEECCC TDRELEPVDDRQLLSYGYGLTTAVSRPTASAAALSHNEYVDASVRLIIKLERFHPACVAF CCCCCCCCCHHHHHHHCCCHHHHHCCCCCHHHHHCCCCCCCCEEEEEEEECCCCHHHHHH LGKAAYAAMTSQRVVPWGPQRRRMGGARVWVLPNPSGRNRAFSLAGLVDAYGEFRASVES HHHHHHHHHHCCCCCCCCCHHHCCCCCEEEEEECCCCCCCEEHHHHHHHHHHHHHHHHHH QIRYGESPQCAEVDSLK HHHCCCCCCCCCCCCCC >Mature Secondary Structure MKHPQLAPTHGPSGPLPDIMKPGLSAVFCGLNPGLRAAASGHHFAGHGNRFWRVIHLAGI CCCCCCCCCCCCCCCCCHHHCCCCCEEEECCCCCCHHCCCCCCCCCCCCEEEEEEEECCC TDRELEPVDDRQLLSYGYGLTTAVSRPTASAAALSHNEYVDASVRLIIKLERFHPACVAF CCCCCCCCCHHHHHHHCCCHHHHHCCCCCHHHHHCCCCCCCCEEEEEEEECCCCHHHHHH LGKAAYAAMTSQRVVPWGPQRRRMGGARVWVLPNPSGRNRAFSLAGLVDAYGEFRASVES HHHHHHHHHHCCCCCCCCCHHHCCCCCEEEEEECCCCCCCEEHHHHHHHHHHHHHHHHHH QIRYGESPQCAEVDSLK HHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA