Click here to switch to the map view.

The map label for this gene is ylbK [H]

Identifier: 73538284

GI number: 73538284

Start: 1121199

End: 1122137

Strand: Direct

Name: ylbK [H]

Synonym: Reut_B4457

Alternate gene names: 73538284

Gene position: 1121199-1122137 (Clockwise)

Preceding gene: 73538282

Following gene: 73538291

Centisome position: 41.13

GC content: 68.05

Gene sequence:

>939_bases
ATGGAAAAAACCGCTTTTGTCTTTGCCGGCGGCGGCAGCCTGGGCGCGATCCAGGTAGGCATGCTGCGCGAACTGGTGGC
GTGGGGCCTGACGCCCGACCTCGTAATCGGGGCCTCGGCCGGGGCCATCAATGGAGCCTACTTCGCGTGCCACCCGGGGC
GCGAAGGGGCCGCGCAACTGGAGCAACTGTGGCGCGCGATCCGGCGCGCGGAGATCATGCCCTGGTCGTGGCGCAGCGTG
CTGGGCATGCTGGGCGGCAGCCGCGGCTACCTCGTGGATGCGTTTGGCCTGCGCACCTTGCTGAACCGCAACTTTGGCGA
CGCGCGCCTTGAAAGTGCCGCGCTGCCGCTGCATGTGGTGGCAACCGATATGCAGAGCGGCGCGGAAGTCCTGCTTTCCA
GCGGCGGCATCGTCGAGGCCGTGCTCGCCAGCGCGGCGATTCCCGGCGTGTTCCCGCCGGTGCAGTTCGAAGGACGCACG
CTGATCGACGGAGGCGTCGCGAACAACACCCCGGTTTCCACCGCGATCCGGCTCGGCGCCACGCGCGTGATCGTGCTGCC
GGCAGGCTTCACGTGCTCAGAGCGGCGTCCGCCGCGCGGGGCGCTCGAACACGCGTTCAATGCGCTTTCGCTGCTGGTGG
CGCGCCAGCTTGTCCACGACCTGCAGCACTGGAGCAACCACGCACATATTTCCGTGGTGCCACCGCTGTGCCCGCTCGAT
ATCTCACCCTATGACTACTCGCGCTGCGGCGAGCTGATCGACCGGGCGGCCGGCACGACGGCGCTGTGGCTGTCTCGCAA
TGGCCTGGACAGCCAGAATGTGCCGGGCGCCCTGCACCCGCACACGCATGATGCGGAATCGCCGAGTTGCAGCGCGGACC
TGCACCCAGCGTCGCACCAGCATCACGATCATTCTCCGCCTGCCGAGCGGCATCTGTAG

Upstream 100 bases:

>100_bases
GAAGCCCGCCCTGCCAACCGGCGCCAGTGTCGCCTATGCTTTGCTCAGGACGATTTCAGCCCGAGCACAAGCGCGGCGTG
GATTGCGCCGCACCCATACC

Downstream 100 bases:

>100_bases
CAAACGGGCCGGCACGGGCATCGGACCGGCCCCACCGGCTTACTCCACCTTCACGCCGCCCTTCCTCACCACCTCGCCCC
AGCGCACGGATTCATCCTTG

Product: patatin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 312; Mature: 312

Protein sequence:

>312_residues
MEKTAFVFAGGGSLGAIQVGMLRELVAWGLTPDLVIGASAGAINGAYFACHPGREGAAQLEQLWRAIRRAEIMPWSWRSV
LGMLGGSRGYLVDAFGLRTLLNRNFGDARLESAALPLHVVATDMQSGAEVLLSSGGIVEAVLASAAIPGVFPPVQFEGRT
LIDGGVANNTPVSTAIRLGATRVIVLPAGFTCSERRPPRGALEHAFNALSLLVARQLVHDLQHWSNHAHISVVPPLCPLD
ISPYDYSRCGELIDRAAGTTALWLSRNGLDSQNVPGALHPHTHDAESPSCSADLHPASHQHHDHSPPAERHL

Sequences:

>Translated_312_residues
MEKTAFVFAGGGSLGAIQVGMLRELVAWGLTPDLVIGASAGAINGAYFACHPGREGAAQLEQLWRAIRRAEIMPWSWRSV
LGMLGGSRGYLVDAFGLRTLLNRNFGDARLESAALPLHVVATDMQSGAEVLLSSGGIVEAVLASAAIPGVFPPVQFEGRT
LIDGGVANNTPVSTAIRLGATRVIVLPAGFTCSERRPPRGALEHAFNALSLLVARQLVHDLQHWSNHAHISVVPPLCPLD
ISPYDYSRCGELIDRAAGTTALWLSRNGLDSQNVPGALHPHTHDAESPSCSADLHPASHQHHDHSPPAERHL
>Mature_312_residues
MEKTAFVFAGGGSLGAIQVGMLRELVAWGLTPDLVIGASAGAINGAYFACHPGREGAAQLEQLWRAIRRAEIMPWSWRSV
LGMLGGSRGYLVDAFGLRTLLNRNFGDARLESAALPLHVVATDMQSGAEVLLSSGGIVEAVLASAAIPGVFPPVQFEGRT
LIDGGVANNTPVSTAIRLGATRVIVLPAGFTCSERRPPRGALEHAFNALSLLVARQLVHDLQHWSNHAHISVVPPLCPLD
ISPYDYSRCGELIDRAAGTTALWLSRNGLDSQNVPGALHPHTHDAESPSCSADLHPASHQHHDHSPPAERHL

Specific function: Unknown

COG id: COG1752

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 patatin domain [H]

Homologues:

Organism=Homo sapiens, GI148727335, Length=187, Percent_Identity=30.4812834224599, Blast_Score=72, Evalue=6e-13,
Organism=Homo sapiens, GI148727290, Length=187, Percent_Identity=30.4812834224599, Blast_Score=72, Evalue=6e-13,
Organism=Homo sapiens, GI260656043, Length=191, Percent_Identity=30.8900523560209, Blast_Score=72, Evalue=8e-13,
Organism=Homo sapiens, GI260656041, Length=191, Percent_Identity=30.8900523560209, Blast_Score=72, Evalue=9e-13,
Organism=Homo sapiens, GI116256487, Length=191, Percent_Identity=30.8900523560209, Blast_Score=72, Evalue=9e-13,
Organism=Homo sapiens, GI260656037, Length=191, Percent_Identity=30.8900523560209, Blast_Score=72, Evalue=9e-13,
Organism=Homo sapiens, GI260656039, Length=191, Percent_Identity=30.8900523560209, Blast_Score=72, Evalue=1e-12,
Organism=Escherichia coli, GI226510936, Length=186, Percent_Identity=28.494623655914, Blast_Score=70, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016035
- InterPro:   IPR001423
- InterPro:   IPR002641 [H]

Pfam domain/function: PF01734 Patatin [H]

EC number: NA

Molecular weight: Translated: 33164; Mature: 33164

Theoretical pI: Translated: 6.83; Mature: 6.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKTAFVFAGGGSLGAIQVGMLRELVAWGLTPDLVIGASAGAINGAYFACHPGREGAAQL
CCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCHHEEECCCCCCCCCEEEECCCCCHHHHH
EQLWRAIRRAEIMPWSWRSVLGMLGGSRGYLVDAFGLRTLLNRNFGDARLESAALPLHVV
HHHHHHHHHHCCCCCCHHHHHHHHCCCCCCEEEHHHHHHHHHCCCCHHHHHHCCCCEEEE
ATDMQSGAEVLLSSGGIVEAVLASAAIPGVFPPVQFEGRTLIDGGVANNTPVSTAIRLGA
ECCHHCCHHHHHCCCCHHHHHHHHHCCCCCCCCCEECCCEEECCCCCCCCCHHHHHHHCC
TRVIVLPAGFTCSERRPPRGALEHAFNALSLLVARQLVHDLQHWSNHAHISVVPPLCPLD
EEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCC
ISPYDYSRCGELIDRAAGTTALWLSRNGLDSQNVPGALHPHTHDAESPSCSADLHPASHQ
CCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
HHDHSPPAERHL
CCCCCCCHHCCC
>Mature Secondary Structure
MEKTAFVFAGGGSLGAIQVGMLRELVAWGLTPDLVIGASAGAINGAYFACHPGREGAAQL
CCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCHHEEECCCCCCCCCEEEECCCCCHHHHH
EQLWRAIRRAEIMPWSWRSVLGMLGGSRGYLVDAFGLRTLLNRNFGDARLESAALPLHVV
HHHHHHHHHHCCCCCCHHHHHHHHCCCCCCEEEHHHHHHHHHCCCCHHHHHHCCCCEEEE
ATDMQSGAEVLLSSGGIVEAVLASAAIPGVFPPVQFEGRTLIDGGVANNTPVSTAIRLGA
ECCHHCCHHHHHCCCCHHHHHHHHHCCCCCCCCCEECCCEEECCCCCCCCCHHHHHHHCC
TRVIVLPAGFTCSERRPPRGALEHAFNALSLLVARQLVHDLQHWSNHAHISVVPPLCPLD
EEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCC
ISPYDYSRCGELIDRAAGTTALWLSRNGLDSQNVPGALHPHTHDAESPSCSADLHPASHQ
CCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
HHDHSPPAERHL
CCCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]