| Definition | Ralstonia eutropha JMP134 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_007348 |
| Length | 2,726,152 |
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The map label for this gene is kdgR [C]
Identifier: 73538291
GI number: 73538291
Start: 1130908
End: 1131651
Strand: Direct
Name: kdgR [C]
Synonym: Reut_B4464
Alternate gene names: 73538291
Gene position: 1130908-1131651 (Clockwise)
Preceding gene: 73538284
Following gene: 73538292
Centisome position: 41.48
GC content: 69.35
Gene sequence:
>744_bases ATGCCTGCCAAGCCATCTACGCCCAGTGGGGTCCAGAGCCTCACCCGCGCCTTCGCCCTGCTTGAGCTGCTCGCCGAGCA CCATGAAACCGGGTTAACCCTGCCGGAGCTGGCCATCAAGGCCGACATCGACCGCACCACGGCGCACCGCATGGCCCGCT TCCTGGAGGCGGCCGGCTATATCGAGCGCGAGTCGGCCAGCAAGCGCCTGTACCTGGGCACCACGGCCATGTCGCTCGGC CTGCGCGCGATGAACCGCCCGCCGCCCGGCAGTGTGCTCGTGACCAAGATGAAGGCGCTCGCGCGGCTGACCGGCGACGC GGTATTCCTGATCGTGCGCATCGGCGATCACGGCCATTGCCTGCATACCGAGGAAGGCAGCCACCGCATCAAGTCCTTCC ACATGCTGACGGGCAGCTCGCGCCTGCTGGGCCAGGGCACCGGCAGCATGGCCTTGCTGGCGCGCCTGGACAACGACGCC GTGCGCGCGCACTACGAGCGCCACCGGGCCGAGTACGAAGCCAGCGGCCGCAGCCTGATGAAGCTGATGCGCGGCGTAGA ACGCAGCCGCGCGTGCGGCTACGCGCTGGCCGGCGCCGATGGCGTGGCCGGTGTCGGCTATGCGCTGCCGATGGCCATGC ACGCCGACGCGGCCATCAGCATTGTGTCGGCGGCATCACGCATGCCGGTGGCGCGCCGGCATGAGATGGGGCGGATCATC GGCGGGATGTTTGTGGGGGAGTGA
Upstream 100 bases:
>100_bases GATTGCAAACCACCGCGCCCCGCGGGACAACATTAATCGCTCAGATTGTGCATAATGTGCACGCCAAACCCAATGCTCCC CGACCGGACGCCGCCCGCGC
Downstream 100 bases:
>100_bases GGCGGCTTGAATGAAAAGGCTGCGGGAACAGCCTCTTCGTTCAAGCGCGGGCGAGCACCGGTCCGGACAATCAGCGGACC GAAACAGCTTCCATCGTCCC
Product: regulatory protein IclR
Products: NA
Alternate protein names: IclR Helix-Turn-Helix Domain-Containing; Regulatory Protein IclR; Transcriptional Regulator; Regulatory Proteins IclR; Transcriptional Regulator Family; IclR Family Regulatory Protein; IclR-Family Transcriptional Regulator
Number of amino acids: Translated: 247; Mature: 246
Protein sequence:
>247_residues MPAKPSTPSGVQSLTRAFALLELLAEHHETGLTLPELAIKADIDRTTAHRMARFLEAAGYIERESASKRLYLGTTAMSLG LRAMNRPPPGSVLVTKMKALARLTGDAVFLIVRIGDHGHCLHTEEGSHRIKSFHMLTGSSRLLGQGTGSMALLARLDNDA VRAHYERHRAEYEASGRSLMKLMRGVERSRACGYALAGADGVAGVGYALPMAMHADAAISIVSAASRMPVARRHEMGRII GGMFVGE
Sequences:
>Translated_247_residues MPAKPSTPSGVQSLTRAFALLELLAEHHETGLTLPELAIKADIDRTTAHRMARFLEAAGYIERESASKRLYLGTTAMSLG LRAMNRPPPGSVLVTKMKALARLTGDAVFLIVRIGDHGHCLHTEEGSHRIKSFHMLTGSSRLLGQGTGSMALLARLDNDA VRAHYERHRAEYEASGRSLMKLMRGVERSRACGYALAGADGVAGVGYALPMAMHADAAISIVSAASRMPVARRHEMGRII GGMFVGE >Mature_246_residues PAKPSTPSGVQSLTRAFALLELLAEHHETGLTLPELAIKADIDRTTAHRMARFLEAAGYIERESASKRLYLGTTAMSLGL RAMNRPPPGSVLVTKMKALARLTGDAVFLIVRIGDHGHCLHTEEGSHRIKSFHMLTGSSRLLGQGTGSMALLARLDNDAV RAHYERHRAEYEASGRSLMKLMRGVERSRACGYALAGADGVAGVGYALPMAMHADAAISIVSAASRMPVARRHEMGRIIG GMFVGE
Specific function: Transcriptional Regulator Of The Kdgk Gene For The Kdg Kinase And The Kdgt Gene For The Kdg Permease. [C]
COG id: COG1414
COG function: function code K; Transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26569; Mature: 26438
Theoretical pI: Translated: 10.23; Mature: 10.23
Prosite motif: PS51077 HTH_ICLR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 5.7 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAKPSTPSGVQSLTRAFALLELLAEHHETGLTLPELAIKADIDRTTAHRMARFLEAAGY CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCC IERESASKRLYLGTTAMSLGLRAMNRPPPGSVLVTKMKALARLTGDAVFLIVRIGDHGHC HHHCCCCCEEEEEHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCE LHTEEGSHRIKSFHMLTGSSRLLGQGTGSMALLARLDNDAVRAHYERHRAEYEASGRSLM ECCCCCCHHHHHEEEECCCCCEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCHHHHH KLMRGVERSRACGYALAGADGVAGVGYALPMAMHADAAISIVSAASRMPVARRHEMGRII HHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH GGMFVGE HHHHCCC >Mature Secondary Structure PAKPSTPSGVQSLTRAFALLELLAEHHETGLTLPELAIKADIDRTTAHRMARFLEAAGY CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCC IERESASKRLYLGTTAMSLGLRAMNRPPPGSVLVTKMKALARLTGDAVFLIVRIGDHGHC HHHCCCCCEEEEEHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCE LHTEEGSHRIKSFHMLTGSSRLLGQGTGSMALLARLDNDAVRAHYERHRAEYEASGRSLM ECCCCCCHHHHHEEEECCCCCEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCHHHHH KLMRGVERSRACGYALAGADGVAGVGYALPMAMHADAAISIVSAASRMPVARRHEMGRII HHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH GGMFVGE HHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA