| Definition | Ralstonia eutropha JMP134 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_007348 |
| Length | 2,726,152 |
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The map label for this gene is yceH [C]
Identifier: 73538282
GI number: 73538282
Start: 1118472
End: 1119176
Strand: Direct
Name: yceH [C]
Synonym: Reut_B4455
Alternate gene names: 73538282
Gene position: 1118472-1119176 (Clockwise)
Preceding gene: 73538280
Following gene: 73538284
Centisome position: 41.03
GC content: 66.81
Gene sequence:
>705_bases ATGAGCTCCACGCCTGACACCCCCTCCCGCCAGCCGATCCGCGCGCTGACCCCGATCGAAGGACGCGTACTCGGCGTGCT GAAGGAGAAGCAGCACACCGTGCCCGATACCTACCCGCTGTCGCTCAATGCGCTCACCGCGGGCTGCAACCAGAAGACCG CGCGTGCGCCGGTCATGAATGTCACGGAAGCGGAGGTAGTCGTGGCGATCGATGGCCTGAAAGGCCTGAGCCTGGTGTTC GAAGGCAGCAGCAGCCGCGTGCCGCGCTTCGAACACAATATGAACCGCGTGCTGGGCGTGCCCTCGCAGTCGGCCGCGCT GCTGGCCATGCTGCTGCTGCGCGGGCCGCAGACCGCGGCCGAACTACGCCTGAACACGGTGCGCCTGCACGCGTTCGCGG ACATCTCGTCCGTTGAGGGGTTCCTGGACGAACTGGCCGAACATGAGCCGCCCTATGTGGTGAAGCTCCCCCGTGCGGCG GGCGAGCGCGAGCATCGGTGGATGCACCTGCTCGGCGGGGAAATCAATGTAGACAGCTTTGCCGCCGCCGGAGCGGCCCT GGCTGACGAATCTGTCGCGCCCTCTGAACTCGAGCGCTTGCGTGCCGAACAACGCGACCTTTCGAACCGGGTACAGCGCC TGGAAGCGCTGGTCGAACATATGGCCAGCCAGCTCGGCATCGACCCGGACGCGCTGGGCGCCTGA
Upstream 100 bases:
>100_bases GCCGCGGCAGGTTTGGGGACGGGCAGTTGCACATTGCGCCGGCTTGCGTTTGAATGTCCGCCTTGCCGGCACTCCGCCGC GGCACCACGACACATTCTCC
Downstream 100 bases:
>100_bases CCGAGGCGCGGGCCGAGTCAAACCCCGGCCCGCGAAGACCCCGAAGATCCTCTTCGTAGTCTTCCTGTCAGCTCTTGCTC GACGCACTGAACTGCTGCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 234; Mature: 233
Protein sequence:
>234_residues MSSTPDTPSRQPIRALTPIEGRVLGVLKEKQHTVPDTYPLSLNALTAGCNQKTARAPVMNVTEAEVVVAIDGLKGLSLVF EGSSSRVPRFEHNMNRVLGVPSQSAALLAMLLLRGPQTAAELRLNTVRLHAFADISSVEGFLDELAEHEPPYVVKLPRAA GEREHRWMHLLGGEINVDSFAAAGAALADESVAPSELERLRAEQRDLSNRVQRLEALVEHMASQLGIDPDALGA
Sequences:
>Translated_234_residues MSSTPDTPSRQPIRALTPIEGRVLGVLKEKQHTVPDTYPLSLNALTAGCNQKTARAPVMNVTEAEVVVAIDGLKGLSLVF EGSSSRVPRFEHNMNRVLGVPSQSAALLAMLLLRGPQTAAELRLNTVRLHAFADISSVEGFLDELAEHEPPYVVKLPRAA GEREHRWMHLLGGEINVDSFAAAGAALADESVAPSELERLRAEQRDLSNRVQRLEALVEHMASQLGIDPDALGA >Mature_233_residues SSTPDTPSRQPIRALTPIEGRVLGVLKEKQHTVPDTYPLSLNALTAGCNQKTARAPVMNVTEAEVVVAIDGLKGLSLVFE GSSSRVPRFEHNMNRVLGVPSQSAALLAMLLLRGPQTAAELRLNTVRLHAFADISSVEGFLDELAEHEPPYVVKLPRAAG EREHRWMHLLGGEINVDSFAAAGAALADESVAPSELERLRAEQRDLSNRVQRLEALVEHMASQLGIDPDALGA
Specific function: Unknown
COG id: COG3132
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0502 family
Homologues:
Organism=Escherichia coli, GI1787306, Length=214, Percent_Identity=40.6542056074766, Blast_Score=139, Evalue=2e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y4455_CUPPJ (Q46SS9)
Other databases:
- EMBL: CP000091 - RefSeq: YP_298649.1 - ProteinModelPortal: Q46SS9 - SMR: Q46SS9 - GeneID: 3613966 - GenomeReviews: CP000091_GR - KEGG: reu:Reut_B4455 - NMPDR: fig|264198.3.peg.5823 - HOGENOM: HBG298268 - OMA: TTPDQYP - BioCyc: REUT264198:REUT_B4455-MONOMER - HAMAP: MF_01584 - InterPro: IPR007432 - InterPro: IPR011991 - Gene3D: G3DSA:1.10.10.10
Pfam domain/function: PF04337 DUF480
EC number: NA
Molecular weight: Translated: 25275; Mature: 25144
Theoretical pI: Translated: 5.61; Mature: 5.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSTPDTPSRQPIRALTPIEGRVLGVLKEKQHTVPDTYPLSLNALTAGCNQKTARAPVMN CCCCCCCCCCCCCHHCCCCCCHHHHHHHHHCCCCCCCCCCCHHHEECCCCCCCCCCCCCC VTEAEVVVAIDGLKGLSLVFEGSSSRVPRFEHNMNRVLGVPSQSAALLAMLLLRGPQTAA CCCCEEEEEECCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHH ELRLNTVRLHAFADISSVEGFLDELAEHEPPYVVKLPRAAGEREHRWMHLLGGEINVDSF HHHHHEEEEEHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHCCCCCCHHH AAAGAALADESVAPSELERLRAEQRDLSNRVQRLEALVEHMASQLGIDPDALGA HHHCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCC >Mature Secondary Structure SSTPDTPSRQPIRALTPIEGRVLGVLKEKQHTVPDTYPLSLNALTAGCNQKTARAPVMN CCCCCCCCCCCCHHCCCCCCHHHHHHHHHCCCCCCCCCCCHHHEECCCCCCCCCCCCCC VTEAEVVVAIDGLKGLSLVFEGSSSRVPRFEHNMNRVLGVPSQSAALLAMLLLRGPQTAA CCCCEEEEEECCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHH ELRLNTVRLHAFADISSVEGFLDELAEHEPPYVVKLPRAAGEREHRWMHLLGGEINVDSF HHHHHEEEEEHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHCCCCCCHHH AAAGAALADESVAPSELERLRAEQRDLSNRVQRLEALVEHMASQLGIDPDALGA HHHCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA