| Definition | Ralstonia eutropha JMP134 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_007348 |
| Length | 2,726,152 |
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The map label for this gene is trxB [H]
Identifier: 73538281
GI number: 73538281
Start: 1116521
End: 1118254
Strand: Reverse
Name: trxB [H]
Synonym: Reut_B4454
Alternate gene names: 73538281
Gene position: 1118254-1116521 (Counterclockwise)
Preceding gene: 73538283
Following gene: 73538279
Centisome position: 41.02
GC content: 69.03
Gene sequence:
>1734_bases ATGGCGCAGGCGGACCGGACGGAGAGCGTTGAGGGGCAGGGCACCGAGGCCACGGCAAGCCTCGATGCACCGTATTCGAC GCTGGAAAGCCGATGGCACCAGATGTTTCCGACGCTCACTGGCGACGAAGTCGAACGGATGCGGCACTTTGGCACGCCGC AGCGCTGGCAAGCCGGCGAACAACTGTTTTCGGTCGGGCAGGTGGGCCGCGGCATGTGCGTGGTGGTCAGCGGCTGTATC CAGATCATCCGCCGCGACGGGCTCGGGCATGAGCACCGCATTACCGACCTCGGGCCGGGCATGTTTTCGGCGGAAGTGGG CACGCTGACCGGGCGCCCGTCGCTCGTGGACGGCCGCGCGGTGACCGATTCCGAAGGCTTCGCGATCCCGCCCGACAGGC TTCGCGCCTTGCTGGTGGCGGAGGCTGATCTTGGCGAGCGCATCATGCGCGCGCTGATCCTGCGCCGCGTCGGGCTGATC GAGTCCGGCAGCGGCCCGGTACTGGTCGGTCATGGCGCCGAACCGCTGCTGCTGGCGCTGCAGGCGTTCCTGCGCCGCAA CGGTCACCCGTACACGGTGATCGACATGGACGTCGAGCGCGACTGTTCCTGCCTGAGCGAGTTCGCGAACGCGCCGGCTT CGGACTTCCCGCTCGTGATCTGCCCGGACGGCCGCGTGCTGCGCGCGCCCGATGAAGGGCAACTGGCCTCGTGCCTCGGC TTGCTGCCCGAATTCGATCCGACCCACGTCTACGACGTGGTCGTGGTGGGCGCAGGTCCCGCCGGCCTGGCCACGGCCGT ATATGCCGCGTCCGAAGGGTTGTCGGTGGCGGTGATCGACTGCCGCTCGCCGGGCGGCCAGGCCGGAGCCAGCGCGCGCA TCGAGAACTACCTCGGGTTTCCCACCGGTATCTCGGGCCAGGCGCTGGCCGGGCGCGCGTTTGTGCAGGCCCTCAAATTC GGCGCCCACATTGCGATCCCGCTGGAAGTGAAGGCCCTGCATTGCGGTTCGGATCCGATCCGGCTCGAACTGGCCGATGG CCGCATGATTTCGACGCATACGGTGGTGATCGCCACAGGCGCCCAGTACCGCCGGCCGGCCATCGACGCGCTCGAACGCT TCGAGGGGCGGGGCGTGTACTACTGGGCCTCGCCGGTGGAAGCCAAGCTGTGCAAGAACGAGCCGGTGATGCTGGTCGGC GGTGGCAACTCGGCCGGACAGGCGGCGGTATTCCTGGCCACGCATGCGGCGCATGTCCACATGCTGGTGCGCGGGCAGGG GCTGGCGGCCACCATGTCGCGCTATCTGGTCGACCGTATCGGCGGGCTGCCCAACGTGCAACTACACACCCGTGCCGAAA TCCATGCGCTCGAAGGGGACGGGTGGCTGTCCGATGTCCGCTACCAGGCGCCCACCGAGAGCGACGGGCTGGTATCGCTG CCGGTGCGCCACCTGTTCCTGTTCATCGGCGCCGATCCCAATGCCTCGTGGCTGCGCACGTGCAACGTGGAGACCGACGA CAAGGGCTTCGTGCGCACGGGCGGTGGGACGCTGGGCTGCGCGTCGGCCGTGCCGTATCCGCTGCAGACCAGCGTGCCGG GCGTGTTCGCGATTGGCGACGTGCGCTCGGGCTCGACCAAGCGCGTGGCCGCTGCAGTGGGGGAAGGGGCCTCGGTCGTC GCGCAGATCCACAGCTACCTCGCCGGCCTGACGACGGCGGCACAGGCCGCCTGA
Upstream 100 bases:
>100_bases CGCGCCGACTACTATCGATGAGGTGCAACGACCGGTTGGGCGTTGATGCGCCGGAGTGCGCGAAAGCCGACAAATTCTTT TTTGCTACGGGGAGGCCAGT
Downstream 100 bases:
>100_bases GCCGCTGCCGCGCGCGGTGTGGCACGGCTTGCCGGCATGCCTTGCTTTACTGCATCTTCCCGAGGTTCCCGATCCTCACC ATCATCTCGGTGAACATCTG
Product: cyclic nucleotide-regulated FAD-dependent pyridine nucleotide-disulfide oxidoreductase
Products: NA
Alternate protein names: TRXR [H]
Number of amino acids: Translated: 577; Mature: 576
Protein sequence:
>577_residues MAQADRTESVEGQGTEATASLDAPYSTLESRWHQMFPTLTGDEVERMRHFGTPQRWQAGEQLFSVGQVGRGMCVVVSGCI QIIRRDGLGHEHRITDLGPGMFSAEVGTLTGRPSLVDGRAVTDSEGFAIPPDRLRALLVAEADLGERIMRALILRRVGLI ESGSGPVLVGHGAEPLLLALQAFLRRNGHPYTVIDMDVERDCSCLSEFANAPASDFPLVICPDGRVLRAPDEGQLASCLG LLPEFDPTHVYDVVVVGAGPAGLATAVYAASEGLSVAVIDCRSPGGQAGASARIENYLGFPTGISGQALAGRAFVQALKF GAHIAIPLEVKALHCGSDPIRLELADGRMISTHTVVIATGAQYRRPAIDALERFEGRGVYYWASPVEAKLCKNEPVMLVG GGNSAGQAAVFLATHAAHVHMLVRGQGLAATMSRYLVDRIGGLPNVQLHTRAEIHALEGDGWLSDVRYQAPTESDGLVSL PVRHLFLFIGADPNASWLRTCNVETDDKGFVRTGGGTLGCASAVPYPLQTSVPGVFAIGDVRSGSTKRVAAAVGEGASVV AQIHSYLAGLTTAAQAA
Sequences:
>Translated_577_residues MAQADRTESVEGQGTEATASLDAPYSTLESRWHQMFPTLTGDEVERMRHFGTPQRWQAGEQLFSVGQVGRGMCVVVSGCI QIIRRDGLGHEHRITDLGPGMFSAEVGTLTGRPSLVDGRAVTDSEGFAIPPDRLRALLVAEADLGERIMRALILRRVGLI ESGSGPVLVGHGAEPLLLALQAFLRRNGHPYTVIDMDVERDCSCLSEFANAPASDFPLVICPDGRVLRAPDEGQLASCLG LLPEFDPTHVYDVVVVGAGPAGLATAVYAASEGLSVAVIDCRSPGGQAGASARIENYLGFPTGISGQALAGRAFVQALKF GAHIAIPLEVKALHCGSDPIRLELADGRMISTHTVVIATGAQYRRPAIDALERFEGRGVYYWASPVEAKLCKNEPVMLVG GGNSAGQAAVFLATHAAHVHMLVRGQGLAATMSRYLVDRIGGLPNVQLHTRAEIHALEGDGWLSDVRYQAPTESDGLVSL PVRHLFLFIGADPNASWLRTCNVETDDKGFVRTGGGTLGCASAVPYPLQTSVPGVFAIGDVRSGSTKRVAAAVGEGASVV AQIHSYLAGLTTAAQAA >Mature_576_residues AQADRTESVEGQGTEATASLDAPYSTLESRWHQMFPTLTGDEVERMRHFGTPQRWQAGEQLFSVGQVGRGMCVVVSGCIQ IIRRDGLGHEHRITDLGPGMFSAEVGTLTGRPSLVDGRAVTDSEGFAIPPDRLRALLVAEADLGERIMRALILRRVGLIE SGSGPVLVGHGAEPLLLALQAFLRRNGHPYTVIDMDVERDCSCLSEFANAPASDFPLVICPDGRVLRAPDEGQLASCLGL LPEFDPTHVYDVVVVGAGPAGLATAVYAASEGLSVAVIDCRSPGGQAGASARIENYLGFPTGISGQALAGRAFVQALKFG AHIAIPLEVKALHCGSDPIRLELADGRMISTHTVVIATGAQYRRPAIDALERFEGRGVYYWASPVEAKLCKNEPVMLVGG GNSAGQAAVFLATHAAHVHMLVRGQGLAATMSRYLVDRIGGLPNVQLHTRAEIHALEGDGWLSDVRYQAPTESDGLVSLP VRHLFLFIGADPNASWLRTCNVETDDKGFVRTGGGTLGCASAVPYPLQTSVPGVFAIGDVRSGSTKRVAAAVGEGASVVA QIHSYLAGLTTAAQAA
Specific function: Unknown
COG id: COG0492
COG function: function code O; Thioredoxin reductase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family [H]
Homologues:
Organism=Escherichia coli, GI1787114, Length=324, Percent_Identity=31.4814814814815, Blast_Score=139, Evalue=5e-34, Organism=Escherichia coli, GI87081763, Length=340, Percent_Identity=29.7058823529412, Blast_Score=106, Evalue=5e-24, Organism=Saccharomyces cerevisiae, GI6320560, Length=333, Percent_Identity=30.9309309309309, Blast_Score=126, Evalue=1e-29, Organism=Saccharomyces cerevisiae, GI6321898, Length=327, Percent_Identity=29.3577981651376, Blast_Score=120, Evalue=5e-28,
Paralogues:
None
Copy number: 808 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013027 - InterPro: IPR008255 - InterPro: IPR001327 - InterPro: IPR000103 [H]
Pfam domain/function: PF00070 Pyr_redox; PF07992 Pyr_redox_2 [H]
EC number: =1.8.1.9 [H]
Molecular weight: Translated: 60864; Mature: 60733
Theoretical pI: Translated: 6.06; Mature: 6.06
Prosite motif: PS50042 CNMP_BINDING_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQADRTESVEGQGTEATASLDAPYSTLESRWHQMFPTLTGDEVERMRHFGTPQRWQAGE CCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHH QLFSVGQVGRGMCVVVSGCIQIIRRDGLGHEHRITDLGPGMFSAEVGTLTGRPSLVDGRA HHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCEECCCCCCCEECCCCCCCCCCCCCCCCE VTDSEGFAIPPDRLRALLVAEADLGERIMRALILRRVGLIESGSGPVLVGHGAEPLLLAL EECCCCCCCCHHHHHEEEEECCCHHHHHHHHHHHHHHCCEECCCCCEEEECCCCHHHHHH QAFLRRNGHPYTVIDMDVERDCSCLSEFANAPASDFPLVICPDGRVLRAPDEGQLASCLG HHHHHCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCEEECCCCCEEECCCCCHHHHHHH LLPEFDPTHVYDVVVVGAGPAGLATAVYAASEGLSVAVIDCRSPGGQAGASARIENYLGF CCCCCCCCEEEEEEEECCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHCCC PTGISGQALAGRAFVQALKFGAHIAIPLEVKALHCGSDPIRLELADGRMISTHTVVIATG CCCCCCCHHHHHHHHHHHHCCCEEEEEEEEEEEECCCCCEEEEECCCEEEEEEEEEEECC AQYRRPAIDALERFEGRGVYYWASPVEAKLCKNEPVMLVGGGNSAGQAAVFLATHAAHVH CCCCCHHHHHHHHHCCCEEEEECCCCHHHHCCCCCEEEEECCCCCCCEEEEEEECCEEEE MLVRGQGLAATMSRYLVDRIGGLPNVQLHTRAEIHALEGDGWLSDVRYQAPTESDGLVSL EEEECCCHHHHHHHHHHHHHCCCCCCEEEECEEEEEECCCCCHHCCEECCCCCCCCEEEE PVRHLFLFIGADPNASWLRTCNVETDDKGFVRTGGGTLGCASAVPYPLQTSVPGVFAIGD CCCEEEEEEECCCCCCEEEEECCCCCCCCEEEECCCCEEHHCCCCCCCCCCCCCEEEEEC VRSGSTKRVAAAVGEGASVVAQIHSYLAGLTTAAQAA CCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure AQADRTESVEGQGTEATASLDAPYSTLESRWHQMFPTLTGDEVERMRHFGTPQRWQAGE CCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHH QLFSVGQVGRGMCVVVSGCIQIIRRDGLGHEHRITDLGPGMFSAEVGTLTGRPSLVDGRA HHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCEECCCCCCCEECCCCCCCCCCCCCCCCE VTDSEGFAIPPDRLRALLVAEADLGERIMRALILRRVGLIESGSGPVLVGHGAEPLLLAL EECCCCCCCCHHHHHEEEEECCCHHHHHHHHHHHHHHCCEECCCCCEEEECCCCHHHHHH QAFLRRNGHPYTVIDMDVERDCSCLSEFANAPASDFPLVICPDGRVLRAPDEGQLASCLG HHHHHCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCEEECCCCCEEECCCCCHHHHHHH LLPEFDPTHVYDVVVVGAGPAGLATAVYAASEGLSVAVIDCRSPGGQAGASARIENYLGF CCCCCCCCEEEEEEEECCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHCCC PTGISGQALAGRAFVQALKFGAHIAIPLEVKALHCGSDPIRLELADGRMISTHTVVIATG CCCCCCCHHHHHHHHHHHHCCCEEEEEEEEEEEECCCCCEEEEECCCEEEEEEEEEEECC AQYRRPAIDALERFEGRGVYYWASPVEAKLCKNEPVMLVGGGNSAGQAAVFLATHAAHVH CCCCCHHHHHHHHHCCCEEEEECCCCHHHHCCCCCEEEEECCCCCCCEEEEEEECCEEEE MLVRGQGLAATMSRYLVDRIGGLPNVQLHTRAEIHALEGDGWLSDVRYQAPTESDGLVSL EEEECCCHHHHHHHHHHHHHCCCCCCEEEECEEEEEECCCCCHHCCEECCCCCCCCEEEE PVRHLFLFIGADPNASWLRTCNVETDDKGFVRTGGGTLGCASAVPYPLQTSVPGVFAIGD CCCEEEEEEECCCCCCEEEEECCCCCCCCEEEECCCCEEHHCCCCCCCCCCCCCEEEEEC VRSGSTKRVAAAVGEGASVVAQIHSYLAGLTTAAQAA CCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11353084 [H]