| Definition | Mycoplasma hyopneumoniae J chromosome, complete genome. |
|---|---|
| Accession | NC_007295 |
| Length | 897,405 |
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The map label for this gene is 71893853
Identifier: 71893853
GI number: 71893853
Start: 644416
End: 647232
Strand: Reverse
Name: 71893853
Synonym: MHJ_0502
Alternate gene names: NA
Gene position: 647232-644416 (Counterclockwise)
Preceding gene: 71893856
Following gene: 71893852
Centisome position: 72.12
GC content: 32.91
Gene sequence:
>2817_bases GTGGGTAAAATATTTATTGGCTCAGTTTTAAGTATTACTTCATTAGTTAGTTTTTTATCCTGCGGGGTTCAGCCAGCCTG GCAGCGGCAGGAATTTAATATTAATGTTAACAGCGCAACTTCTTCACCTGGGGCTTTTAAAAGTTTTAATAACACTTTCA CATCGCCATTGACTAGTTCACAACTTTATTTTAATAATTCATTTTTGATCCAAACAGTTTATGAAAATGAACTAAAAATT GAAAAAAACGGTGTTTTAGCAGCTGATCAAACCAAAAAAGACAAGCGATTTATATATGAACCAAGCCAACCAAGCTATTC CTGAAATGCCCTTGTGAATATTAAAGCAATTTTGGTTACTCAAAATGATGGAACTCAACTAGTTTTTGATAGTGATCAAC ATGAATTAGGTTATCTAAAACCAGGTCAAAAACCGAAGTCATTAGTAATAAAATTGACTTCAGCAGCAAAAAATTCAATT AATTCCGAATTTTTTGCTGCTTCGCTTGAAAAAGCGAAAAAAGTTCAGTTTTTTCTAAAAGATCAAATAAACTGGGTTAC TTGGGATGGAAAACCTTCAGGATATTATCTAAAACCGCGGGATTATTTCTATGGGTTTCGCAGTCAGCGACTTTCGGTTC CAAGTGAGCGCGAAAAATTTGGCGGAAGTCCAGAAATTGACAAGTTAGCACAGGAAAAAATTCCTAATTATGATCCAAAA TCAAATTATTTTACTAATACAATTACTAATTTTTATCTCCTTGAACTTTTTGGCCTTGATCCAAAAGATTTAGATGATGA AAATAAATATATTCAGGAATATCAAGGTAGTCTTGAAAAATTTAAAGGCCAAAAAGCACTTACTTTTCAAAAAGGAGCAA ATAAAGAAAAGGTTTTTTTCAATGGTTTTATTGATAAAATCGTTCTTTCAGGGATGCTTAGACCAGTTCCTTCCGATTTT ATTGATAAAAGAACAAAAGAACTTGCAAAAGAAAAAGATGGAAAATTAGTAGGCCGTTTTGGGGAAACAGGCGATGCTTT AAAATTCGGGGCTTATTGATATGGCCAGGATTTTAAAAAGGATTTACTTTATAATTCACCTTATCTTCCAACAGTTTTTG ATCAACATAAACAATCCTGAATGATCAATGAATATTTTCCCCGGACTGGTTGAAAAGAAAGTTTTCCTTATATTTTTAAG AAAATTAATGTTCTTTATTCAAAATATCCATCTGCTTCTGCTTTTGCAGATTCCCAGTTTAATTCTTATCGCGAACAGAC AATTAATGCAATCGGTTTTGATAGTCTTAGTGAGTCCCAGAAAAATTTGGTAGCAAATAATCAAGCAAAATTTGGCTGAA CACTAAATCGGCAAGAAAGTAAAAACGACCTTCATAAATGGTATTATTCTCTTTTAGTTCCAGGCTCTCTAAGGCAGAAA TTTAAGGCCGAAACGGGTGTGAGTTTTGATGAGAAATACTATGGATTCAATGATAATTTTGCTAGATTAAATTTTGGTGT TCCCCTTAAAGAAATCGCTGAGGGTAGTGCTAAAATTATTGAACACTTGATTTCAGGTCCAAGTTTGGAATTCCGCCAGA TAATCGCTAATGCTTGAAATTTATATACAACCTCACAAGCAATTACCTCCCAACAACTTGCCTGATATAATTTTATCTCC CCGGATAATAAACTAAATTCAAATCCAAAATCAAAAACACCCCGTGATTTTTACCAAAAAGTAAATACAATTAAATTAGT TGATGCTACAGGTAAAATTTATTATCAAAAAGATCCTAAATCCGAAAGAGAACAAAATTTTGCCAATGTAAAAAACGGCA AAAAACAATTTCAAGCACCAAATTTTGACATTTTAAAAGAAAGAATGAAAAAAATTCTTGATAAATTTTGACAGGATAAC AAACTTGGCCCAAATGAAAAAGTTGAATGAACTAGTCATAGTTTATATACTGATACCGGAAGTAAAACAATTGCAGCAAT AAATAATGCCGCTGATGCAATCGAAAGTCTCGATCCCCGACTTAAAATCAAGCGAATCTGACCAATTACTGACCTTGCAA GACGCTCAAATTATTTATATACCCGCACGGGCGGGCTTGATTTTGGCGGTTGGAGTTATGACTATAACGGAATCGGAACG GTTTTAGATGGAAAAATTCAAAGAAACGGCATTGGCTATGCAATGCTTTCAGCAATTTATCTAAGAGGCGAAAATTCTGA GATTGCAAAATCTTATCCCCTTATTTATAAATATGCCCTTGCAGCAAAAAATTTTTTTGATAAATTTGCAAAAAAAGGTT GAATACGCAAATTTGAAGAATGAAAAGATGCTACAAATGCCCCTGATTTTGGCGCGCATAATCAACATTTTTCCCCGGAT TTAACAAATTATATAATTGGGTCTGTGATCGAAGAAGATGATCCAGAAAATCCAGGAAAAAAAATCAAAGTTTGGAAAAA CTTTGTCGAAGAACTTAATGCTAAAAACAAAAATAAAGGTGATTTAATTGATTTTGATTTTCTAGCTGAATCAGCAATTT TTAATTTGACTTTTCAAGAAGAAAATTCTGATGAGGATCTTGTTGAATTAAGTGCCGAACTTACCTCGCTTTTAGGTTTT GGCCTTAGCGATCTTGTCAGCGTTTTTTCTTCTACCCCTTATGCAATTTTACAAAATCCAAACTTGGAAATTCCCAATGC AAACGATACTTATGATGCATTTACACCCCCAGATATGATTGTCATTAAACCTTTAAAAGAAAAATGGGAAAAAAATAATA AAAAAGGAGAAAAATAA
Upstream 100 bases:
>100_bases TTTGATATAGTAAATTCACCATTTAAAATTTAAAACTACTATTCAAAATAGTAGTTTTTTTATTTTTTTAGTAAAAAAAA AAAAAAAAAAGGAGAAAAAA
Downstream 100 bases:
>100_bases TGGCGCTGAAATACTTTTTTAAACGGCTTTTACTTGCTTTGATTACATTTTTAGCAATTTATATAATTGTTTTTGTCTTA CTTGCTAATTTTTCTCCTGA
Product: putative lipoprotein
Products: NA
Alternate protein names: Intrinsic Membrane Protein
Number of amino acids: Translated: 938; Mature: 937
Protein sequence:
>938_residues MGKIFIGSVLSITSLVSFLSCGVQPAWQRQEFNINVNSATSSPGAFKSFNNTFTSPLTSSQLYFNNSFLIQTVYENELKI EKNGVLAADQTKKDKRFIYEPSQPSYSWNALVNIKAILVTQNDGTQLVFDSDQHELGYLKPGQKPKSLVIKLTSAAKNSI NSEFFAASLEKAKKVQFFLKDQINWVTWDGKPSGYYLKPRDYFYGFRSQRLSVPSEREKFGGSPEIDKLAQEKIPNYDPK SNYFTNTITNFYLLELFGLDPKDLDDENKYIQEYQGSLEKFKGQKALTFQKGANKEKVFFNGFIDKIVLSGMLRPVPSDF IDKRTKELAKEKDGKLVGRFGETGDALKFGAYWYGQDFKKDLLYNSPYLPTVFDQHKQSWMINEYFPRTGWKESFPYIFK KINVLYSKYPSASAFADSQFNSYREQTINAIGFDSLSESQKNLVANNQAKFGWTLNRQESKNDLHKWYYSLLVPGSLRQK FKAETGVSFDEKYYGFNDNFARLNFGVPLKEIAEGSAKIIEHLISGPSLEFRQIIANAWNLYTTSQAITSQQLAWYNFIS PDNKLNSNPKSKTPRDFYQKVNTIKLVDATGKIYYQKDPKSEREQNFANVKNGKKQFQAPNFDILKERMKKILDKFWQDN KLGPNEKVEWTSHSLYTDTGSKTIAAINNAADAIESLDPRLKIKRIWPITDLARRSNYLYTRTGGLDFGGWSYDYNGIGT VLDGKIQRNGIGYAMLSAIYLRGENSEIAKSYPLIYKYALAAKNFFDKFAKKGWIRKFEEWKDATNAPDFGAHNQHFSPD LTNYIIGSVIEEDDPENPGKKIKVWKNFVEELNAKNKNKGDLIDFDFLAESAIFNLTFQEENSDEDLVELSAELTSLLGF GLSDLVSVFSSTPYAILQNPNLEIPNANDTYDAFTPPDMIVIKPLKEKWEKNNKKGEK
Sequences:
>Translated_938_residues MGKIFIGSVLSITSLVSFLSCGVQPAWQRQEFNINVNSATSSPGAFKSFNNTFTSPLTSSQLYFNNSFLIQTVYENELKI EKNGVLAADQTKKDKRFIYEPSQPSYS*NALVNIKAILVTQNDGTQLVFDSDQHELGYLKPGQKPKSLVIKLTSAAKNSI NSEFFAASLEKAKKVQFFLKDQINWVTWDGKPSGYYLKPRDYFYGFRSQRLSVPSEREKFGGSPEIDKLAQEKIPNYDPK SNYFTNTITNFYLLELFGLDPKDLDDENKYIQEYQGSLEKFKGQKALTFQKGANKEKVFFNGFIDKIVLSGMLRPVPSDF IDKRTKELAKEKDGKLVGRFGETGDALKFGAY*YGQDFKKDLLYNSPYLPTVFDQHKQS*MINEYFPRTG*KESFPYIFK KINVLYSKYPSASAFADSQFNSYREQTINAIGFDSLSESQKNLVANNQAKFG*TLNRQESKNDLHKWYYSLLVPGSLRQK FKAETGVSFDEKYYGFNDNFARLNFGVPLKEIAEGSAKIIEHLISGPSLEFRQIIANA*NLYTTSQAITSQQLA*YNFIS PDNKLNSNPKSKTPRDFYQKVNTIKLVDATGKIYYQKDPKSEREQNFANVKNGKKQFQAPNFDILKERMKKILDKF*QDN KLGPNEKVE*TSHSLYTDTGSKTIAAINNAADAIESLDPRLKIKRI*PITDLARRSNYLYTRTGGLDFGGWSYDYNGIGT VLDGKIQRNGIGYAMLSAIYLRGENSEIAKSYPLIYKYALAAKNFFDKFAKKG*IRKFEE*KDATNAPDFGAHNQHFSPD LTNYIIGSVIEEDDPENPGKKIKVWKNFVEELNAKNKNKGDLIDFDFLAESAIFNLTFQEENSDEDLVELSAELTSLLGF GLSDLVSVFSSTPYAILQNPNLEIPNANDTYDAFTPPDMIVIKPLKEKWEKNNKKGEK >Mature_937_residues GKIFIGSVLSITSLVSFLSCGVQPAWQRQEFNINVNSATSSPGAFKSFNNTFTSPLTSSQLYFNNSFLIQTVYENELKIE KNGVLAADQTKKDKRFIYEPSQPSYS*NALVNIKAILVTQNDGTQLVFDSDQHELGYLKPGQKPKSLVIKLTSAAKNSIN SEFFAASLEKAKKVQFFLKDQINWVTWDGKPSGYYLKPRDYFYGFRSQRLSVPSEREKFGGSPEIDKLAQEKIPNYDPKS NYFTNTITNFYLLELFGLDPKDLDDENKYIQEYQGSLEKFKGQKALTFQKGANKEKVFFNGFIDKIVLSGMLRPVPSDFI DKRTKELAKEKDGKLVGRFGETGDALKFGAY*YGQDFKKDLLYNSPYLPTVFDQHKQS*MINEYFPRTG*KESFPYIFKK INVLYSKYPSASAFADSQFNSYREQTINAIGFDSLSESQKNLVANNQAKFG*TLNRQESKNDLHKWYYSLLVPGSLRQKF KAETGVSFDEKYYGFNDNFARLNFGVPLKEIAEGSAKIIEHLISGPSLEFRQIIANA*NLYTTSQAITSQQLA*YNFISP DNKLNSNPKSKTPRDFYQKVNTIKLVDATGKIYYQKDPKSEREQNFANVKNGKKQFQAPNFDILKERMKKILDKF*QDNK LGPNEKVE*TSHSLYTDTGSKTIAAINNAADAIESLDPRLKIKRI*PITDLARRSNYLYTRTGGLDFGGWSYDYNGIGTV LDGKIQRNGIGYAMLSAIYLRGENSEIAKSYPLIYKYALAAKNFFDKFAKKG*IRKFEE*KDATNAPDFGAHNQHFSPDL TNYIIGSVIEEDDPENPGKKIKVWKNFVEELNAKNKNKGDLIDFDFLAESAIFNLTFQEENSDEDLVELSAELTSLLGFG LSDLVSVFSSTPYAILQNPNLEIPNANDTYDAFTPPDMIVIKPLKEKWEKNNKKGEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 104854; Mature: 104723
Theoretical pI: Translated: 9.31; Mature: 9.31
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKIFIGSVLSITSLVSFLSCGVQPAWQRQEFNINVNSATSSPGAFKSFNNTFTSPLTSS CCCEEHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCHHHCCCCCCCCCCCC QLYFNNSFLIQTVYENELKIEKNGVLAADQTKKDKRFIYEPSQPSYSNALVNIKAILVTQ EEEECCCEEEEEEECCCEEEECCCEEECCCCCCCCCEEECCCCCCCCCEEEEEEEEEEEC NDGTQLVFDSDQHELGYLKPGQKPKSLVIKLTSAAKNSINSEFFAASLEKAKKVQFFLKD CCCCEEEEECCCCCCCCCCCCCCCCCEEEEEHHHHHHCCCHHHHHHHHHHHHHHHHHHHC QINWVTWDGKPSGYYLKPRDYFYGFRSQRLSVPSEREKFGGSPEIDKLAQEKIPNYDPKS CCCEEEECCCCCCEEECCHHHHHCHHHCCCCCCCHHHHCCCCCCHHHHHHHHCCCCCCCC NYFTNTITNFYLLELFGLDPKDLDDENKYIQEYQGSLEKFKGQKALTFQKGANKEKVFFN CCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEEEH GFIDKIVLSGMLRPVPSDFIDKRTKELAKEKDGKLVGRFGETGDALKFGAYYGQDFKKDL HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCEEECHHHCCHHHHHH LYNSPYLPTVFDQHKQSMINEYFPRTGKESFPYIFKKINVLYSKYPSASAFADSQFNSYR HCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH EQTINAIGFDSLSESQKNLVANNQAKFGTLNRQESKNDLHKWYYSLLVPGSLRQKFKAET HHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHC GVSFDEKYYGFNDNFARLNFGVPLKEIAEGSAKIIEHLISGPSLEFRQIIANANLYTTSQ CCCCCHHCCCCCCCEEEEECCCCHHHHHCCHHHHHHHHHCCCCHHHHHHHHCCCEEECHH AITSQQLAYNFISPDNKLNSNPKSKTPRDFYQKVNTIKLVDATGKIYYQKDPKSEREQNF HHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHCCEEEEEECCCEEEECCCCCHHHHHHH ANVKNGKKQFQAPNFDILKERMKKILDKFQDNKLGPNEKVETSHSLYTDTGSKTIAAINN HHHHCCHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCEEEEHHH AADAIESLDPRLKIKRIPITDLARRSNYLYTRTGGLDFGGWSYDYNGIGTVLDGKIQRNG HHHHHHHCCCCEEEEECCHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCEECCEEECCC IGYAMLSAIYLRGENSEIAKSYPLIYKYALAAKNFFDKFAKKGIRKFEEKDATNAPDFGA CCHHHHHHHHEECCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC HNQHFSPDLTNYIIGSVIEEDDPENPGKKIKVWKNFVEELNAKNKNKGDLIDFDFLAESA CCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHCCC IFNLTFQEENSDEDLVELSAELTSLLGFGLSDLVSVFSSTPYAILQNPNLEIPNANDTYD EEEEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCCC AFTPPDMIVIKPLKEKWEKNNKKGEK CCCCCCEEEECCHHHHHHHCCCCCCC >Mature Secondary Structure GKIFIGSVLSITSLVSFLSCGVQPAWQRQEFNINVNSATSSPGAFKSFNNTFTSPLTSS CCEEHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCHHHCCCCCCCCCCCC QLYFNNSFLIQTVYENELKIEKNGVLAADQTKKDKRFIYEPSQPSYSNALVNIKAILVTQ EEEECCCEEEEEEECCCEEEECCCEEECCCCCCCCCEEECCCCCCCCCEEEEEEEEEEEC NDGTQLVFDSDQHELGYLKPGQKPKSLVIKLTSAAKNSINSEFFAASLEKAKKVQFFLKD CCCCEEEEECCCCCCCCCCCCCCCCCEEEEEHHHHHHCCCHHHHHHHHHHHHHHHHHHHC QINWVTWDGKPSGYYLKPRDYFYGFRSQRLSVPSEREKFGGSPEIDKLAQEKIPNYDPKS CCCEEEECCCCCCEEECCHHHHHCHHHCCCCCCCHHHHCCCCCCHHHHHHHHCCCCCCCC NYFTNTITNFYLLELFGLDPKDLDDENKYIQEYQGSLEKFKGQKALTFQKGANKEKVFFN CCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEEEH GFIDKIVLSGMLRPVPSDFIDKRTKELAKEKDGKLVGRFGETGDALKFGAYYGQDFKKDL HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCEEECHHHCCHHHHHH LYNSPYLPTVFDQHKQSMINEYFPRTGKESFPYIFKKINVLYSKYPSASAFADSQFNSYR HCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH EQTINAIGFDSLSESQKNLVANNQAKFGTLNRQESKNDLHKWYYSLLVPGSLRQKFKAET HHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHC GVSFDEKYYGFNDNFARLNFGVPLKEIAEGSAKIIEHLISGPSLEFRQIIANANLYTTSQ CCCCCHHCCCCCCCEEEEECCCCHHHHHCCHHHHHHHHHCCCCHHHHHHHHCCCEEECHH AITSQQLAYNFISPDNKLNSNPKSKTPRDFYQKVNTIKLVDATGKIYYQKDPKSEREQNF HHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHCCEEEEEECCCEEEECCCCCHHHHHHH ANVKNGKKQFQAPNFDILKERMKKILDKFQDNKLGPNEKVETSHSLYTDTGSKTIAAINN HHHHCCHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCEEEEHHH AADAIESLDPRLKIKRIPITDLARRSNYLYTRTGGLDFGGWSYDYNGIGTVLDGKIQRNG HHHHHHHCCCCEEEEECCHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCEECCEEECCC IGYAMLSAIYLRGENSEIAKSYPLIYKYALAAKNFFDKFAKKGIRKFEEKDATNAPDFGA CCHHHHHHHHEECCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC HNQHFSPDLTNYIIGSVIEEDDPENPGKKIKVWKNFVEELNAKNKNKGDLIDFDFLAESA CCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHCCC IFNLTFQEENSDEDLVELSAELTSLLGFGLSDLVSVFSSTPYAILQNPNLEIPNANDTYD EEEEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCCC AFTPPDMIVIKPLKEKWEKNNKKGEK CCCCCCEEEECCHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA