| Definition | Mycoplasma hyopneumoniae J chromosome, complete genome. |
|---|---|
| Accession | NC_007295 |
| Length | 897,405 |
Click here to switch to the map view.
The map label for this gene is 71893847
Identifier: 71893847
GI number: 71893847
Start: 635956
End: 637584
Strand: Reverse
Name: 71893847
Synonym: MHJ_0496
Alternate gene names: NA
Gene position: 637584-635956 (Counterclockwise)
Preceding gene: 71893848
Following gene: 71893846
Centisome position: 71.05
GC content: 27.56
Gene sequence:
>1629_bases ATGACAGAAACGATCAAAATAATTGCTGCATATTTGCAGGAATTTAACAAAAAAGAAGGTCTAAATTTAAGAATTTTCCT CAAAGGAAGTTATATTCACTGGTCTAAAAAGTTAATCGAGCGCGTTCCAAATGATTTAGACTTTGGTTTTTTGAATGGGC CTTTAATTTGAAGGCAAAAATTTATCACTTTTTTACTAGCAGAAAAATTTGCTGTTCCCATTCGAGTTGATGAAAATTTA AAAATTCTAAAAATTAACAACATAAATGTTGAATTTATTTTACTAGAAACAATTCCAGAAGAATTTTTAGAAAAAACAGA GTGGGAGAATATTTGAAAAACATCGGTAGAATCGGCATTTTTTAAAAAAATTCTAATGATGACTTATGTCCTAGATGATG TCTATCCTCATAATAGCCATCAAAAAATGACTTCAATAATAGCCGATTTGGTGATGTTTTGAAATAAATTTAGAAATAAA AATTTATTAGAATATTCCCTCCATAAAAAAGAATTTTTGGTAAGTAGCTGAAATTCTTTTTTTATTTATTTATATTATAA CTATGATCGAATGCTCGAAATTCACTTTGATGTTAAAAAATTAGATAAGTATTTAACCAATGTTTTGCCAGATCTAAAAG ATTTTATCTACGGATTTTTTGACTATATCAAAAATACAAAAAGTATTTATGATCTTGCAATGTTTTTTGATAAAATCCAA AAAAACATTGCAAAAATAAACAAATCACTGACAGATTTTCTAAATTTTCCCTCCTTGACGGGTTTTGAAGAACCTTTTAT CAAAAAAATTCTTATAGGAAAAATCACTAAATCCACAAAAGGTGGAACTTTTTCACTTAATAACCCCAAAAAAAATACCT TATTTATTGCACATACTGACGAAGTTGGCGGAATTGTTATAAACGGAGAAGTTTTTAATCAGGGAAGCCCTTATTGAGAA AGTGGAATTTTTGAGGTTTTTGATAAAAATGGTGAAAAAACCGGGCAAATTTTCTGCCAAAAAATGGATAATTTAATTTT TTCTGATGAAAAACAACGAAAAATTAACCGCCCAAATTTACTTTGTGATAAAATTAATCACAAAGAAATTTACCAAATTC TGCCAAAAAATAAATTGAAGGTGGCAAAATTTGTAATTTGGGCCCGAAATCACGATAATAAAATTTCCAATTTAGTACTA AAAACACTTGTTGATTTTATCTCAGATGCAAATATCGTTTTAACAACAAAAGAAGAAATTCAACTTCAGGGCACAAAGGA CAAGGAGCTAATTCAAGAAGTTGAAAATTACAAATTTTTGATTAATTTAGATGTTAGCGAAGATGAAAATTGGGATGTTG AGGGGGTAAAAATAAGAGTTGCCGATCCTTTTATGGCTTATAATTCCGATATTTATGAAAAAGTAAAAAATCTTTTTGAT GAAAACGGGCTTGAATTTAGACCCTTTTTTGGATCAGGTTCTACTGATATTACCAATTTTCAGAATCAAAATTCAATTAC CCTATCAATTCCGGCTTCAAAAATTCATAGCAATAATTCAAAAATTTTATTAAAAAATTTTTTCTATTTATTATGAATTT GCAAGGAAATTAATGACAAATTTCATTAA
Upstream 100 bases:
>100_bases TTAGGAATGGAAAGATTGATGCTATTTTTAATTGGAAAAAATGATATACGCGAAGTTCAACTAATCCCGAGAGAAACTGA CAAGGAAATTCTCCCCTAAA
Downstream 100 bases:
>100_bases AAACGCCTGTAAATATACAAGTTCATTAAATTTTTCCTTGGTTGGCTCGGAAGCTTTTAAATTTTCATCCTCGCTTTATA TTTATAAAATTACTGGAGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 542; Mature: 541
Protein sequence:
>542_residues MTETIKIIAAYLQEFNKKEGLNLRIFLKGSYIHWSKKLIERVPNDLDFGFLNGPLIWRQKFITFLLAEKFAVPIRVDENL KILKINNINVEFILLETIPEEFLEKTEWENIWKTSVESAFFKKILMMTYVLDDVYPHNSHQKMTSIIADLVMFWNKFRNK NLLEYSLHKKEFLVSSWNSFFIYLYYNYDRMLEIHFDVKKLDKYLTNVLPDLKDFIYGFFDYIKNTKSIYDLAMFFDKIQ KNIAKINKSLTDFLNFPSLTGFEEPFIKKILIGKITKSTKGGTFSLNNPKKNTLFIAHTDEVGGIVINGEVFNQGSPYWE SGIFEVFDKNGEKTGQIFCQKMDNLIFSDEKQRKINRPNLLCDKINHKEIYQILPKNKLKVAKFVIWARNHDNKISNLVL KTLVDFISDANIVLTTKEEIQLQGTKDKELIQEVENYKFLINLDVSEDENWDVEGVKIRVADPFMAYNSDIYEKVKNLFD ENGLEFRPFFGSGSTDITNFQNQNSITLSIPASKIHSNNSKILLKNFFYLLWICKEINDKFH
Sequences:
>Translated_542_residues MTETIKIIAAYLQEFNKKEGLNLRIFLKGSYIHWSKKLIERVPNDLDFGFLNGPLI*RQKFITFLLAEKFAVPIRVDENL KILKINNINVEFILLETIPEEFLEKTEWENI*KTSVESAFFKKILMMTYVLDDVYPHNSHQKMTSIIADLVMF*NKFRNK NLLEYSLHKKEFLVSS*NSFFIYLYYNYDRMLEIHFDVKKLDKYLTNVLPDLKDFIYGFFDYIKNTKSIYDLAMFFDKIQ KNIAKINKSLTDFLNFPSLTGFEEPFIKKILIGKITKSTKGGTFSLNNPKKNTLFIAHTDEVGGIVINGEVFNQGSPY*E SGIFEVFDKNGEKTGQIFCQKMDNLIFSDEKQRKINRPNLLCDKINHKEIYQILPKNKLKVAKFVIWARNHDNKISNLVL KTLVDFISDANIVLTTKEEIQLQGTKDKELIQEVENYKFLINLDVSEDENWDVEGVKIRVADPFMAYNSDIYEKVKNLFD ENGLEFRPFFGSGSTDITNFQNQNSITLSIPASKIHSNNSKILLKNFFYLL*ICKEINDKFH >Mature_541_residues TETIKIIAAYLQEFNKKEGLNLRIFLKGSYIHWSKKLIERVPNDLDFGFLNGPLI*RQKFITFLLAEKFAVPIRVDENLK ILKINNINVEFILLETIPEEFLEKTEWENI*KTSVESAFFKKILMMTYVLDDVYPHNSHQKMTSIIADLVMF*NKFRNKN LLEYSLHKKEFLVSS*NSFFIYLYYNYDRMLEIHFDVKKLDKYLTNVLPDLKDFIYGFFDYIKNTKSIYDLAMFFDKIQK NIAKINKSLTDFLNFPSLTGFEEPFIKKILIGKITKSTKGGTFSLNNPKKNTLFIAHTDEVGGIVINGEVFNQGSPY*ES GIFEVFDKNGEKTGQIFCQKMDNLIFSDEKQRKINRPNLLCDKINHKEIYQILPKNKLKVAKFVIWARNHDNKISNLVLK TLVDFISDANIVLTTKEEIQLQGTKDKELIQEVENYKFLINLDVSEDENWDVEGVKIRVADPFMAYNSDIYEKVKNLFDE NGLEFRPFFGSGSTDITNFQNQNSITLSIPASKIHSNNSKILLKNFFYLL*ICKEINDKFH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 62549; Mature: 62418
Theoretical pI: Translated: 8.35; Mature: 8.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTETIKIIAAYLQEFNKKEGLNLRIFLKGSYIHWSKKLIERVPNDLDFGFLNGPLIRQKF CCHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHH ITFLLAEKFAVPIRVDENLKILKINNINVEFILLETIPEEFLEKTEWENIKTSVESAFFK HHHHHHHHHEEEEEECCCEEEEEEECCCEEEEEHHHCCHHHHHHHCHHHHHHHHHHHHHH KILMMTYVLDDVYPHNSHQKMTSIIADLVMFNKFRNKNLLEYSLHKKEFLVSSNSFFIYL HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEHHHCHHHEEEECCCEEEEE YYNYDRMLEIHFDVKKLDKYLTNVLPDLKDFIYGFFDYIKNTKSIYDLAMFFDKIQKNIA EECCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH KINKSLTDFLNFPSLTGFEEPFIKKILIGKITKSTKGGTFSLNNPKKNTLFIAHTDEVGG HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCCEEEEEEECCCCC IVINGEVFNQGSPYESGIFEVFDKNGEKTGQIFCQKMDNLIFSDEKQRKINRPNLLCDKI EEEECEEECCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCC NHKEIYQILPKNKLKVAKFVIWARNHDNKISNLVLKTLVDFISDANIVLTTKEEIQLQGT CHHHHHHHCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEHHHEEECCC KDKELIQEVENYKFLINLDVSEDENWDVEGVKIRVADPFMAYNSDIYEKVKNLFDENGLE CHHHHHHHHHCCEEEEEEECCCCCCCCCCEEEEEEECCHHHHCHHHHHHHHHHHCCCCCE FRPFFGSGSTDITNFQNQNSITLSIPASKIHSNNSKILLKNFFYLLICKEINDKFH EEEECCCCCCCCCCCCCCCEEEEEECHHHHCCCCCEEEHHHHHHHEEEHHHCCCCC >Mature Secondary Structure TETIKIIAAYLQEFNKKEGLNLRIFLKGSYIHWSKKLIERVPNDLDFGFLNGPLIRQKF CHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHH ITFLLAEKFAVPIRVDENLKILKINNINVEFILLETIPEEFLEKTEWENIKTSVESAFFK HHHHHHHHHEEEEEECCCEEEEEEECCCEEEEEHHHCCHHHHHHHCHHHHHHHHHHHHHH KILMMTYVLDDVYPHNSHQKMTSIIADLVMFNKFRNKNLLEYSLHKKEFLVSSNSFFIYL HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEHHHCHHHEEEECCCEEEEE YYNYDRMLEIHFDVKKLDKYLTNVLPDLKDFIYGFFDYIKNTKSIYDLAMFFDKIQKNIA EECCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH KINKSLTDFLNFPSLTGFEEPFIKKILIGKITKSTKGGTFSLNNPKKNTLFIAHTDEVGG HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCCEEEEEEECCCCC IVINGEVFNQGSPYESGIFEVFDKNGEKTGQIFCQKMDNLIFSDEKQRKINRPNLLCDKI EEEECEEECCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCC NHKEIYQILPKNKLKVAKFVIWARNHDNKISNLVLKTLVDFISDANIVLTTKEEIQLQGT CHHHHHHHCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEHHHEEECCC KDKELIQEVENYKFLINLDVSEDENWDVEGVKIRVADPFMAYNSDIYEKVKNLFDENGLE CHHHHHHHHHCCEEEEEEECCCCCCCCCCEEEEEEECCHHHHCHHHHHHHHHHHCCCCCE FRPFFGSGSTDITNFQNQNSITLSIPASKIHSNNSKILLKNFFYLLICKEINDKFH EEEECCCCCCCCCCCCCCCEEEEEECHHHHCCCCCEEEHHHHHHHEEEHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA