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The map label for this gene is sgaU [H]

Identifier: 71893786

GI number: 71893786

Start: 529088

End: 529972

Strand: Reverse

Name: sgaU [H]

Synonym: MHJ_0435

Alternate gene names: 71893786

Gene position: 529972-529088 (Counterclockwise)

Preceding gene: 71893787

Following gene: 71893785

Centisome position: 59.06

GC content: 30.85

Gene sequence:

>885_bases
TTAAAAAGTACTGAACCTAATTTTTTTGTCGGTATCTACGAAAAAGCAATTGATAAACGTTTTTCGTTAATCGATAAAAT
TAGAATCGCCAAAGAAGCTGGTTTTAATTTTATCGAAATGTCAGTTGATGAAACAGATGAGTTTGCTTCTCGCCTTGATT
TTTCCAATGATGAGATTAAAGTAATTTTAGATACTCTAATCGAACATGATTTTTATATAAATTCAATGTGTTTGTCCTTA
CATCGAAAGTTTCCTTTTGGTTCTGCAAGTGCAAAAATCCGCGAAAAAGCGCTAAAAATTATGGAAAAAGCCTTAATTTT
AGCAAAAAAACTCGGAATTTCAATTATCCAACTTGCCGCTTATGATATTTATTATGAGGAACCCCATCCAAATTCGGAAA
TTTTTTTCATCAAAACAATGAAAAAAATTGTTGCATTAGCAAAAAAATATAGTATAATAATAGCATTTGAGTCAATGGAT
AGAAAATTCGCCGGGACAATCACAAGACTTTTATATTTGCAAAAGTCAGTCGGTGGCGGAGTATTTTTATATCCCGATCT
TGGAAATTTATCGCGTTTTTCCAATGATCTTGAAGTCGAGATTAAGCTCGGCAAAAGTGAAATTATTGCTTTTCATTTTA
AAGATACCTTGCCTGATACCTTCAAAAATCTTGATTTTGGCCAAGGTGATGTTGATTTTGTTTCTGCTTTTAAATACATT
ATAAATGCAGAAATTAATGTCCCATTTGTAATTGAAATGTGACATAAACCAGAAAATTTTGACCAAAATGCTGAATTTGA
GCAAAATTTTCAAAAACAGGTTGAAATAATTCGTTCAGCCCGTGAATTTTTTCAAGAAAAGTTGAGGTTAGCTAATGAAA
ATTAA

Upstream 100 bases:

>100_bases
AAATTATTTAAGGATATCCCAATTTATATTTTTATCGCCGGCCGTTCAATTCGTGATGCAAAAGATCCAGAGGCAAAAGC
AAAGGAATTCAAGGATGAGT

Downstream 100 bases:

>100_bases
AGACCGTAACGAACTTGAAGAACTCCAAAAAGCTGTCTTAGAAGCAAATCTTTTACTTTATAGGTCCAAATTAGCACTTC
ATACCTGGGGAAATGTCTCA

Product: L-xylulose 5-phosphate 3-epimerase

Products: NA

Alternate protein names: L-ascorbate utilization protein E; L-xylulose-5-phosphate 3-epimerase [H]

Number of amino acids: Translated: 294; Mature: 294

Protein sequence:

>294_residues
MKSTEPNFFVGIYEKAIDKRFSLIDKIRIAKEAGFNFIEMSVDETDEFASRLDFSNDEIKVILDTLIEHDFYINSMCLSL
HRKFPFGSASAKIREKALKIMEKALILAKKLGISIIQLAAYDIYYEEPHPNSEIFFIKTMKKIVALAKKYSIIIAFESMD
RKFAGTITRLLYLQKSVGGGVFLYPDLGNLSRFSNDLEVEIKLGKSEIIAFHFKDTLPDTFKNLDFGQGDVDFVSAFKYI
INAEINVPFVIEMWHKPENFDQNAEFEQNFQKQVEIIRSAREFFQEKLRLANEN

Sequences:

>Translated_294_residues
LKSTEPNFFVGIYEKAIDKRFSLIDKIRIAKEAGFNFIEMSVDETDEFASRLDFSNDEIKVILDTLIEHDFYINSMCLSL
HRKFPFGSASAKIREKALKIMEKALILAKKLGISIIQLAAYDIYYEEPHPNSEIFFIKTMKKIVALAKKYSIIIAFESMD
RKFAGTITRLLYLQKSVGGGVFLYPDLGNLSRFSNDLEVEIKLGKSEIIAFHFKDTLPDTFKNLDFGQGDVDFVSAFKYI
INAEINVPFVIEM*HKPENFDQNAEFEQNFQKQVEIIRSAREFFQEKLRLANEN
>Mature_294_residues
LKSTEPNFFVGIYEKAIDKRFSLIDKIRIAKEAGFNFIEMSVDETDEFASRLDFSNDEIKVILDTLIEHDFYINSMCLSL
HRKFPFGSASAKIREKALKIMEKALILAKKLGISIIQLAAYDIYYEEPHPNSEIFFIKTMKKIVALAKKYSIIIAFESMD
RKFAGTITRLLYLQKSVGGGVFLYPDLGNLSRFSNDLEVEIKLGKSEIIAFHFKDTLPDTFKNLDFGQGDVDFVSAFKYI
INAEINVPFVIEM*HKPENFDQNAEFEQNFQKQVEIIRSAREFFQEKLRLANEN

Specific function: Catalyzes the isomerization of L-xylulose-5-phosphate to L-ribulose-5-phosphate. Is involved in the anaerobic L-ascorbate utilization [H]

COG id: COG3623

COG function: function code G; Putative L-xylulose-5-phosphate 3-epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HUMPI family [H]

Homologues:

Organism=Escherichia coli, GI87082294, Length=292, Percent_Identity=39.7260273972603, Blast_Score=205, Evalue=3e-54,
Organism=Escherichia coli, GI1790641, Length=256, Percent_Identity=39.0625, Blast_Score=205, Evalue=3e-54,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004560
- InterPro:   IPR013022
- InterPro:   IPR012307 [H]

Pfam domain/function: PF01261 AP_endonuc_2 [H]

EC number: =5.1.3.22 [H]

Molecular weight: Translated: 33808; Mature: 33808

Theoretical pI: Translated: 5.77; Mature: 5.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
LKSTEPNFFVGIYEKAIDKRFSLIDKIRIAKEAGFNFIEMSVDETDEFASRLDFSNDEIK
CCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHCCCCCCHHH
VILDTLIEHDFYINSMCLSLHRKFPFGSASAKIREKALKIMEKALILAKKLGISIIQLAA
HHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
YDIYYEEPHPNSEIFFIKTMKKIVALAKKYSIIIAFESMDRKFAGTITRLLYLQKSVGGG
HHEEECCCCCCCCEEEHHHHHHHHHHHHHEEEEEEEECCCCHHHHHHHHHHHHHHHCCCC
VFLYPDLGNLSRFSNDLEVEIKLGKSEIIAFHFKDTLPDTFKNLDFGQGDVDFVSAFKYI
EEEECCCCCHHHCCCCCEEEEEECCCEEEEEEECCCCCHHHHCCCCCCCCHHHHHHHHHH
INAEINVPFVIEMHKPENFDQNAEFEQNFQKQVEIIRSAREFFQEKLRLANEN
HCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8948633 [H]