Definition | Candidatus Blochmannia pennsylvanicus str. BPEN, complete genome. |
---|---|
Accession | NC_007292 |
Length | 791,654 |
Click here to switch to the map view.
The map label for this gene is metE
Identifier: 71892393
GI number: 71892393
Start: 781518
End: 783812
Strand: Reverse
Name: metE
Synonym: BPEN_652
Alternate gene names: 71892393
Gene position: 783812-781518 (Counterclockwise)
Preceding gene: 71892394
Following gene: 71892392
Centisome position: 99.01
GC content: 31.29
Gene sequence:
>2295_bases ATGACAATTGTCGGTCATATATTAGGATTTCCTCGTATTGGATTACATAGAGAATTAAAATATGCTCTAGAATATTATTG GGATGGAAAAATCAAAGAAGATAAATTATTAGAAATAGGCCGTACATTACGCATACGTCATTGGAAACAACAGAAAGATT CCGGTATCGACTGGATTTCAGTAGGTGATTTCGCATGGTACGATCATGTTTTAACTACTAGCTTGATGCTCAATAATATT CCAGATAGGCATCGTATTGGTCAAGAAAATATTAATTTAAATACATTGTTTAGAATAAGCCGAGGGTATTCTTTAGACAA AAAATTGATACCTCCTTCAGAAATGAAAAAATGGTTTAATACAAATTATCACTATATAGTACCCGAATTTGTTCCCAATC AGGAATTTAAGTTAAATTGGACTCAATTATTTGATGAAATAGATGAAGCTTTGTCTCTAAAATATACGGTAAAACCAATA CTACTTGGCCCAATTAGTTATCTTTGGTTAGGAAAAATAAAAGGAAAAAAATTTGATCGTTTATCATTATTACCCAATTT ATTATCAGTATATCAAGAAATATTAGATATTTTATTATCAAAAAATATTGATTGGATACAAATTGATGAGCCCATACTAG TTTTGGAGCTACCGTTACAATGGCTAAATGCATATTTAAGCGCGTATGAACAACTTCATGGTAAAGTTAAATTACTATTA ACTACTTATTTCGATAGCATATATCATCAATTAGATATTATTACGCGATTAAAAATAGATGGGCTACATGTAGATCTGGT TTCTAATCCTGATAATATACCTTTACTGCATGCACGACTACCAAAACATTGGACATTATCAGCAGGAGTAGTTAATGGAC GTAATGTATGGAAAACTAATTTACATGATTGGTTTAAAAAACTATATCCTTTAGTAGGCGAGCGCAGCTTATGGATAGGT TCTTCTTGTTCCTTATTACACAGTCCTATTGATCTAAATACGGAGATAAAGTTAGATAAACACATTAAAGAATGGTTTGC TTTTGCGTTGCAAAAATGTTACGAAATAAAAATGTTATGCGCTGCATTGAATGCTGAAAACACAAGTGACGCGACATATG AAGATACACTTAGTGAATATTATATTTCTAATAACTTACGATCGTATTCTAGTACAATTCATAATATACAAGTTAAAAAA CGTCTCGAACACATCGATGAAATTTCTTATTCTAGATCTTCTCCGTACACAACACGAGTTACATTACAGCATAAGAAGTT GAATTTACCATTATTTCCAACAACTACTATCGGTTCATTTCCTCAAACTGAAGAAATTCGTAAACTTCGTTCGCGCTTTA AAAATAACCAAATCAACAAAGAAGATTATCATCTTAATATTAAGAATTACATTAAAAAAATTATTATGGAACAAGAAAAA TTAGATTTAGATATTCTAGTGCATGGAGAACCAGAACGAAATGATATGGTGGAATATTTTGGAGAGAATTTAAATGGATT TATATTTACTCAAAATGGGTGGGTACAAAGTTATGGTTCACGTTGTGTAAAACCTCCGGTAATTATTGGGGATATTAGTC GTTCAAAACCCATTACTATAGAATGGATAAGTTATGCTCAGTCATTAACTAATAAACCGATAAAAGGTATATTAACTGGA CCTGTCACCATAATGTCTTGGTCGTTCCCACGAGAGGATATGCAACGAAAAACAATAGCATTGCAATTAGCGTTATCGAT ACGTGATGAAGTAATAGATTTGGAAAAATCTGGTATTGGAATCATACAAATTGATGAGCCAGCTTTGCGAGAAGGATTAC CTTTAAAACGCTCTGATCAAAAACAATATTTAGAATGGGCAATTAATGTCTTTAGGATCACTGTATCATCAGTGAAAGAT GACACTCAAATTCATACTCATATGTGTTATTCTGAATTTAGTGATATCATTTATGCTATTCTAGCATTAGATGCGGATGT CATCAGTATAGAAGCAGCTAGGTCAGATGAGAAAATATTAAAATCCATACGACATGTAATAAAGAATTTAAATGAAATTG GACCAGGAATATACGATATTCATTCTCCAAATAAACCAACTCAAAATGATCTTATCAGAAGAATTAATCAATTGTTAAAA TATATCCCAGAACAACGTTTATGGATTAATCCTGATTGTGGATTAAAAACAAGATCATGGCCTGAAATTAAACATTCGTT GAATAACATGGTGTCTGCAGCTAAATTATTGCGTAAACAATTTTATTCATCGTAA
Upstream 100 bases:
>100_bases ATAATCGAATTAACTATTGGTGCCATAATACTTTTTTAAATTTTTTACTATAATTTTTTATGAGTACTTCATATAATAAA AATAGCTCATGGAGTGAATT
Downstream 100 bases:
>100_bases ATAATGACTAATAATTTTTATTAATTGATTGTATAGCAATCAATATCAAGATAAAATTACCGGATTTATTGGTAATACAA TGGATTGATTACGAAATCAT
Product: 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase
Products: NA
Alternate protein names: Cobalamin-independent methionine synthase; Methionine synthase, vitamin-B12 independent isozyme
Number of amino acids: Translated: 764; Mature: 763
Protein sequence:
>764_residues MTIVGHILGFPRIGLHRELKYALEYYWDGKIKEDKLLEIGRTLRIRHWKQQKDSGIDWISVGDFAWYDHVLTTSLMLNNI PDRHRIGQENINLNTLFRISRGYSLDKKLIPPSEMKKWFNTNYHYIVPEFVPNQEFKLNWTQLFDEIDEALSLKYTVKPI LLGPISYLWLGKIKGKKFDRLSLLPNLLSVYQEILDILLSKNIDWIQIDEPILVLELPLQWLNAYLSAYEQLHGKVKLLL TTYFDSIYHQLDIITRLKIDGLHVDLVSNPDNIPLLHARLPKHWTLSAGVVNGRNVWKTNLHDWFKKLYPLVGERSLWIG SSCSLLHSPIDLNTEIKLDKHIKEWFAFALQKCYEIKMLCAALNAENTSDATYEDTLSEYYISNNLRSYSSTIHNIQVKK RLEHIDEISYSRSSPYTTRVTLQHKKLNLPLFPTTTIGSFPQTEEIRKLRSRFKNNQINKEDYHLNIKNYIKKIIMEQEK LDLDILVHGEPERNDMVEYFGENLNGFIFTQNGWVQSYGSRCVKPPVIIGDISRSKPITIEWISYAQSLTNKPIKGILTG PVTIMSWSFPREDMQRKTIALQLALSIRDEVIDLEKSGIGIIQIDEPALREGLPLKRSDQKQYLEWAINVFRITVSSVKD DTQIHTHMCYSEFSDIIYAILALDADVISIEAARSDEKILKSIRHVIKNLNEIGPGIYDIHSPNKPTQNDLIRRINQLLK YIPEQRLWINPDCGLKTRSWPEIKHSLNNMVSAAKLLRKQFYSS
Sequences:
>Translated_764_residues MTIVGHILGFPRIGLHRELKYALEYYWDGKIKEDKLLEIGRTLRIRHWKQQKDSGIDWISVGDFAWYDHVLTTSLMLNNI PDRHRIGQENINLNTLFRISRGYSLDKKLIPPSEMKKWFNTNYHYIVPEFVPNQEFKLNWTQLFDEIDEALSLKYTVKPI LLGPISYLWLGKIKGKKFDRLSLLPNLLSVYQEILDILLSKNIDWIQIDEPILVLELPLQWLNAYLSAYEQLHGKVKLLL TTYFDSIYHQLDIITRLKIDGLHVDLVSNPDNIPLLHARLPKHWTLSAGVVNGRNVWKTNLHDWFKKLYPLVGERSLWIG SSCSLLHSPIDLNTEIKLDKHIKEWFAFALQKCYEIKMLCAALNAENTSDATYEDTLSEYYISNNLRSYSSTIHNIQVKK RLEHIDEISYSRSSPYTTRVTLQHKKLNLPLFPTTTIGSFPQTEEIRKLRSRFKNNQINKEDYHLNIKNYIKKIIMEQEK LDLDILVHGEPERNDMVEYFGENLNGFIFTQNGWVQSYGSRCVKPPVIIGDISRSKPITIEWISYAQSLTNKPIKGILTG PVTIMSWSFPREDMQRKTIALQLALSIRDEVIDLEKSGIGIIQIDEPALREGLPLKRSDQKQYLEWAINVFRITVSSVKD DTQIHTHMCYSEFSDIIYAILALDADVISIEAARSDEKILKSIRHVIKNLNEIGPGIYDIHSPNKPTQNDLIRRINQLLK YIPEQRLWINPDCGLKTRSWPEIKHSLNNMVSAAKLLRKQFYSS >Mature_763_residues TIVGHILGFPRIGLHRELKYALEYYWDGKIKEDKLLEIGRTLRIRHWKQQKDSGIDWISVGDFAWYDHVLTTSLMLNNIP DRHRIGQENINLNTLFRISRGYSLDKKLIPPSEMKKWFNTNYHYIVPEFVPNQEFKLNWTQLFDEIDEALSLKYTVKPIL LGPISYLWLGKIKGKKFDRLSLLPNLLSVYQEILDILLSKNIDWIQIDEPILVLELPLQWLNAYLSAYEQLHGKVKLLLT TYFDSIYHQLDIITRLKIDGLHVDLVSNPDNIPLLHARLPKHWTLSAGVVNGRNVWKTNLHDWFKKLYPLVGERSLWIGS SCSLLHSPIDLNTEIKLDKHIKEWFAFALQKCYEIKMLCAALNAENTSDATYEDTLSEYYISNNLRSYSSTIHNIQVKKR LEHIDEISYSRSSPYTTRVTLQHKKLNLPLFPTTTIGSFPQTEEIRKLRSRFKNNQINKEDYHLNIKNYIKKIIMEQEKL DLDILVHGEPERNDMVEYFGENLNGFIFTQNGWVQSYGSRCVKPPVIIGDISRSKPITIEWISYAQSLTNKPIKGILTGP VTIMSWSFPREDMQRKTIALQLALSIRDEVIDLEKSGIGIIQIDEPALREGLPLKRSDQKQYLEWAINVFRITVSSVKDD TQIHTHMCYSEFSDIIYAILALDADVISIEAARSDEKILKSIRHVIKNLNEIGPGIYDIHSPNKPTQNDLIRRINQLLKY IPEQRLWINPDCGLKTRSWPEIKHSLNNMVSAAKLLRKQFYSS
Specific function: Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
COG id: COG0620
COG function: function code E; Methionine synthase II (cobalamin-independent)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the vitamin-B12 independent methionine synthase family
Homologues:
Organism=Escherichia coli, GI2367304, Length=759, Percent_Identity=58.7615283267457, Blast_Score=960, Evalue=0.0, Organism=Saccharomyces cerevisiae, GI6320936, Length=776, Percent_Identity=45.6185567010309, Blast_Score=676, Evalue=0.0,
Paralogues:
None
Copy number: 45,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): METE_BLOPB (Q491V4)
Other databases:
- EMBL: CP000016 - RefSeq: YP_278127.1 - HSSP: Q9X112 - ProteinModelPortal: Q491V4 - SMR: Q491V4 - STRING: Q491V4 - GeneID: 3562729 - GenomeReviews: CP000016_GR - KEGG: bpn:BPEN_652 - eggNOG: COG0620 - HOGENOM: HBG287495 - OMA: RFGWVQS - ProtClustDB: PRK05222 - BioCyc: CBLO291272:BPEN_652-MONOMER - HAMAP: MF_00172 - InterPro: IPR013215 - InterPro: IPR006276 - InterPro: IPR002629 - PIRSF: PIRSF000382 - TIGRFAMs: TIGR01371
Pfam domain/function: PF08267 Meth_synt_1; PF01717 Meth_synt_2
EC number: =2.1.1.14
Molecular weight: Translated: 89004; Mature: 88873
Theoretical pI: Translated: 8.84; Mature: 8.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIVGHILGFPRIGLHRELKYALEYYWDGKIKEDKLLEIGRTLRIRHWKQQKDSGIDWIS CEEEEHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHCCCCCEEE VGDFAWYDHVLTTSLMLNNIPDRHRIGQENINLNTLFRISRGYSLDKKLIPPSEMKKWFN ECCHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHC TNYHYIVPEFVPNQEFKLNWTQLFDEIDEALSLKYTVKPILLGPISYLWLGKIKGKKFDR CCCEEECCCCCCCCCEEEEHHHHHHHHHHHHEEEEEECHHEECCHHHHHHCCCCCCCCHH LSLLPNLLSVYQEILDILLSKNIDWIQIDEPILVLELPLQWLNAYLSAYEQLHGKVKLLL HHHHHHHHHHHHHHHHHHHHCCCCEEEECCCEEEEECCHHHHHHHHHHHHHHCCHHHHHH TTYFDSIYHQLDIITRLKIDGLHVDLVSNPDNIPLLHARLPKHWTLSAGVVNGRNVWKTN HHHHHHHHHHHHHHHEEEECCEEEEEECCCCCCCEEEECCCCCEEEECCCCCCCCCEECC LHDWFKKLYPLVGERSLWIGSSCSLLHSPIDLNTEIKLDKHIKEWFAFALQKCYEIKMLC HHHHHHHHHHHHCCCCEEECCCHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHH AALNAENTSDATYEDTLSEYYISNNLRSYSSTIHNIQVKKRLEHIDEISYSRSSPYTTRV HHHCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEE TLQHKKLNLPLFPTTTIGSFPQTEEIRKLRSRFKNNQINKEDYHLNIKNYIKKIIMEQEK EEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEECHHHHHHHHHHHHHC LDLDILVHGEPERNDMVEYFGENLNGFIFTQNGWVQSYGSRCVKPPVIIGDISRSKPITI CCEEEEEECCCCCHHHHHHHCCCCCEEEEECCCHHHHHCCCCCCCCEEEEECCCCCCEEE EWISYAQSLTNKPIKGILTGPVTIMSWSFPREDMQRKTIALQLALSIRDEVIDLEKSGIG HHHHHHHHHCCCCCCEEEECCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE IIQIDEPALREGLPLKRSDQKQYLEWAINVFRITVSSVKDDTQIHTHMCYSEFSDIIYAI EEEECCHHHHCCCCCCCCCHHHHHHHHHHHHEEEHHHCCCCHHHHHHHHHHHHHHHHHHH LALDADVISIEAARSDEKILKSIRHVIKNLNEIGPGIYDIHSPNKPTQNDLIRRINQLLK HHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHHHHH YIPEQRLWINPDCGLKTRSWPEIKHSLNNMVSAAKLLRKQFYSS HCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TIVGHILGFPRIGLHRELKYALEYYWDGKIKEDKLLEIGRTLRIRHWKQQKDSGIDWIS EEEEHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHCCCCCEEE VGDFAWYDHVLTTSLMLNNIPDRHRIGQENINLNTLFRISRGYSLDKKLIPPSEMKKWFN ECCHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHC TNYHYIVPEFVPNQEFKLNWTQLFDEIDEALSLKYTVKPILLGPISYLWLGKIKGKKFDR CCCEEECCCCCCCCCEEEEHHHHHHHHHHHHEEEEEECHHEECCHHHHHHCCCCCCCCHH LSLLPNLLSVYQEILDILLSKNIDWIQIDEPILVLELPLQWLNAYLSAYEQLHGKVKLLL HHHHHHHHHHHHHHHHHHHHCCCCEEEECCCEEEEECCHHHHHHHHHHHHHHCCHHHHHH TTYFDSIYHQLDIITRLKIDGLHVDLVSNPDNIPLLHARLPKHWTLSAGVVNGRNVWKTN HHHHHHHHHHHHHHHEEEECCEEEEEECCCCCCCEEEECCCCCEEEECCCCCCCCCEECC LHDWFKKLYPLVGERSLWIGSSCSLLHSPIDLNTEIKLDKHIKEWFAFALQKCYEIKMLC HHHHHHHHHHHHCCCCEEECCCHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHH AALNAENTSDATYEDTLSEYYISNNLRSYSSTIHNIQVKKRLEHIDEISYSRSSPYTTRV HHHCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEE TLQHKKLNLPLFPTTTIGSFPQTEEIRKLRSRFKNNQINKEDYHLNIKNYIKKIIMEQEK EEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEECHHHHHHHHHHHHHC LDLDILVHGEPERNDMVEYFGENLNGFIFTQNGWVQSYGSRCVKPPVIIGDISRSKPITI CCEEEEEECCCCCHHHHHHHCCCCCEEEEECCCHHHHHCCCCCCCCEEEEECCCCCCEEE EWISYAQSLTNKPIKGILTGPVTIMSWSFPREDMQRKTIALQLALSIRDEVIDLEKSGIG HHHHHHHHHCCCCCCEEEECCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE IIQIDEPALREGLPLKRSDQKQYLEWAINVFRITVSSVKDDTQIHTHMCYSEFSDIIYAI EEEECCHHHHCCCCCCCCCHHHHHHHHHHHHEEEHHHCCCCHHHHHHHHHHHHHHHHHHH LALDADVISIEAARSDEKILKSIRHVIKNLNEIGPGIYDIHSPNKPTQNDLIRRINQLLK HHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHHHHH YIPEQRLWINPDCGLKTRSWPEIKHSLNNMVSAAKLLRKQFYSS HCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA