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The map label for this gene is rfaF [H]

Identifier: 71892372

GI number: 71892372

Start: 753019

End: 754059

Strand: Direct

Name: rfaF [H]

Synonym: BPEN_631

Alternate gene names: 71892372

Gene position: 753019-754059 (Clockwise)

Preceding gene: 71892371

Following gene: 71892373

Centisome position: 95.12

GC content: 32.37

Gene sequence:

>1041_bases
GTGAAAATATTAGTTATTAGTCCTTCATGGATTGGCGATACCGTGATATCACATAGTATGTATCGATTGTTGATTAAGAA
ATATTGTTCCAATATTAAGATTGATGTTCTTACTCCGATGTGGTGCAAAGATCTGTTCAATCATATGCCTGAAATTAATC
AAACATTATTTATTCCTTACGGGCATGGAGTTTTAGAATTATCAAAATGTTACCATCTCGGAAAATTTTTAAAAAATGAG
AAATATCAACAAGCGATAATATTACCTAATTCATTTAAATCTGCTTTAATACCGTTTTTTGCGGACATTCCGATTCGGAC
CGGATGGCGTGGAGAAATGAGGTATGGTATATTGAATGATTTGAGAATACTTAACAAAAAATTATTCCCGTTAATGGTAC
AACGTTATGCCGCTTTGGTATGTGATTATAATGTTACAAAAAATTCTTATAATTTACCTTGTCCGCTGCCGTTACCCCAA
TTAAGTGTAAATGAAAAAGAAATTGAAGATATATTATACAAATTTAATTTGTATTCTCACAGAGAATCACTGATTGGTTT
ATGCCCAGGCGCGGAATTTGGATTAGCTAAAAGTTGGCCTCATTATCATTACATAACATTAGCTATTCGGTTAATTCGTT
GTGGATATCACGTAGTAATATTAGGATCCCCTAAAGATCAACTAATTAATAGATTTATTCAACATAGCATTCTCAAAAAT
ATGAAACAACATTGTAACAATCTTATAGGAATCACATCATTAGGAGAAGCTATTGCGATTATAGCAGCTTGCACAGGAAT
TATTAGTAATGATTCTGGTTTAATGCATGTAGCTTGCGCATTGAAACGCCCTGTAATAGGGTTGTATGGACCTAGTAATC
CTAAGTTTACTCCACCTTTATTTTCTCAATCTATTGTGATTCGTCGTATGGCAGGATATTATGCCATACGAAACGGCGAT
AGTTTATATGGTTATCATAACAGTTTAATAGATATTACTCCAGATCAAGTTTTAAAGGCATTAAAAACATTATTATATTG
A

Upstream 100 bases:

>100_bases
GGAATTTACTAACCTTAATCAAGGTATATGTCGCTATTTAAATTGGTTGTCATACAACAATGTTAATCATTGTAATAATT
AAGTGAATAAAATTTTCATT

Downstream 100 bases:

>100_bases
TCAATCAAAAAGATAATTATCATGAAGGTTTTAATTATAAAAATTTCTTCTATGGGAGATATTATACATACTTTACCTGC
TGTTACTGATGCATCAAATA

Product: ADP-heptose; LPS heptosyl transferase II

Products: NA

Alternate protein names: ADP-heptose--LPS heptosyltransferase II [H]

Number of amino acids: Translated: 346; Mature: 346

Protein sequence:

>346_residues
MKILVISPSWIGDTVISHSMYRLLIKKYCSNIKIDVLTPMWCKDLFNHMPEINQTLFIPYGHGVLELSKCYHLGKFLKNE
KYQQAIILPNSFKSALIPFFADIPIRTGWRGEMRYGILNDLRILNKKLFPLMVQRYAALVCDYNVTKNSYNLPCPLPLPQ
LSVNEKEIEDILYKFNLYSHRESLIGLCPGAEFGLAKSWPHYHYITLAIRLIRCGYHVVILGSPKDQLINRFIQHSILKN
MKQHCNNLIGITSLGEAIAIIAACTGIISNDSGLMHVACALKRPVIGLYGPSNPKFTPPLFSQSIVIRRMAGYYAIRNGD
SLYGYHNSLIDITPDQVLKALKTLLY

Sequences:

>Translated_346_residues
MKILVISPSWIGDTVISHSMYRLLIKKYCSNIKIDVLTPMWCKDLFNHMPEINQTLFIPYGHGVLELSKCYHLGKFLKNE
KYQQAIILPNSFKSALIPFFADIPIRTGWRGEMRYGILNDLRILNKKLFPLMVQRYAALVCDYNVTKNSYNLPCPLPLPQ
LSVNEKEIEDILYKFNLYSHRESLIGLCPGAEFGLAKSWPHYHYITLAIRLIRCGYHVVILGSPKDQLINRFIQHSILKN
MKQHCNNLIGITSLGEAIAIIAACTGIISNDSGLMHVACALKRPVIGLYGPSNPKFTPPLFSQSIVIRRMAGYYAIRNGD
SLYGYHNSLIDITPDQVLKALKTLLY
>Mature_346_residues
MKILVISPSWIGDTVISHSMYRLLIKKYCSNIKIDVLTPMWCKDLFNHMPEINQTLFIPYGHGVLELSKCYHLGKFLKNE
KYQQAIILPNSFKSALIPFFADIPIRTGWRGEMRYGILNDLRILNKKLFPLMVQRYAALVCDYNVTKNSYNLPCPLPLPQ
LSVNEKEIEDILYKFNLYSHRESLIGLCPGAEFGLAKSWPHYHYITLAIRLIRCGYHVVILGSPKDQLINRFIQHSILKN
MKQHCNNLIGITSLGEAIAIIAACTGIISNDSGLMHVACALKRPVIGLYGPSNPKFTPPLFSQSIVIRRMAGYYAIRNGD
SLYGYHNSLIDITPDQVLKALKTLLY

Specific function: Lipopolysaccharide core biosynthesis. [C]

COG id: COG0859

COG function: function code M; ADP-heptose:LPS heptosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 9 family [H]

Homologues:

Organism=Escherichia coli, GI1790050, Length=345, Percent_Identity=53.3333333333333, Blast_Score=386, Evalue=1e-109,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002201
- InterPro:   IPR011910 [H]

Pfam domain/function: PF01075 Glyco_transf_9 [H]

EC number: 2.-.-.-

Molecular weight: Translated: 39362; Mature: 39362

Theoretical pI: Translated: 9.49; Mature: 9.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKILVISPSWIGDTVISHSMYRLLIKKYCSNIKIDVLTPMWCKDLFNHMPEINQTLFIPY
CEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHCCCCCCEEEEEC
GHGVLELSKCYHLGKFLKNEKYQQAIILPNSFKSALIPFFADIPIRTGWRGEMRYGILND
CCCHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHH
LRILNKKLFPLMVQRYAALVCDYNVTKNSYNLPCPLPLPQLSVNEKEIEDILYKFNLYSH
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
RESLIGLCPGAEFGLAKSWPHYHYITLAIRLIRCGYHVVILGSPKDQLINRFIQHSILKN
HHHHEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHH
MKQHCNNLIGITSLGEAIAIIAACTGIISNDSGLMHVACALKRPVIGLYGPSNPKFTPPL
HHHHHHHEECHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCEEEEECCCCCCCCCCH
FSQSIVIRRMAGYYAIRNGDSLYGYHNSLIDITPDQVLKALKTLLY
HHHHHHHHHHHHHEEEECCCEEEEECCCEEECCHHHHHHHHHHHCC
>Mature Secondary Structure
MKILVISPSWIGDTVISHSMYRLLIKKYCSNIKIDVLTPMWCKDLFNHMPEINQTLFIPY
CEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHCCCCCCEEEEEC
GHGVLELSKCYHLGKFLKNEKYQQAIILPNSFKSALIPFFADIPIRTGWRGEMRYGILND
CCCHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHH
LRILNKKLFPLMVQRYAALVCDYNVTKNSYNLPCPLPLPQLSVNEKEIEDILYKFNLYSH
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
RESLIGLCPGAEFGLAKSWPHYHYITLAIRLIRCGYHVVILGSPKDQLINRFIQHSILKN
HHHHEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHH
MKQHCNNLIGITSLGEAIAIIAACTGIISNDSGLMHVACALKRPVIGLYGPSNPKFTPPL
HHHHHHHEECHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCEEEEECCCCCCCCCCH
FSQSIVIRRMAGYYAIRNGDSLYGYHNSLIDITPDQVLKALKTLLY
HHHHHHHHHHHHHEEEECCCEEEEECCCEEECCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503; 2198271; 8478319 [H]