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The map label for this gene is rfaC [H]

Identifier: 71892373

GI number: 71892373

Start: 754081

End: 755052

Strand: Direct

Name: rfaC [H]

Synonym: BPEN_632

Alternate gene names: 71892373

Gene position: 754081-755052 (Clockwise)

Preceding gene: 71892372

Following gene: 71892374

Centisome position: 95.25

GC content: 30.97

Gene sequence:

>972_bases
ATGAAGGTTTTAATTATAAAAATTTCTTCTATGGGAGATATTATACATACTTTACCTGCTGTTACTGATGCATCAAATAT
TGTACCAAATATATTATTTGATTGGATTGTAGAAGAAACTTTTTCTGACATTCTTAGATGGCATCCGGGAATACATCACA
TTATTCCTATAAACCTTAGATTTTGGATAAAAAAATGGTATAAATTGTCTTCATGGAAGAAATATCGTGAATGTTGCATA
CAATTAAAAAAAAAATATGACGTGATTATTGACGCTCAAGGTCTATTAAAGACATCATTGTTAGTAACATATATGACATG
CGGTAAAAAACATGGCATGGACTATATGAGTGTACGGGAACCTATGAGTTCTTTGTTTTATCATGAACGACATTATTCCA
ATAAAAATCAACACGCTGTGGAGCGCATTCGACAGCTTTTTTCTCTCAGCTTAAAATATCCTATACCATCTTATATAGGC
AAGTATAATATCGAACATTTATTTCCACCTCAAAAACATCATGCTCCTTATTTAATATTTTTCCATTCTACTACTAAATT
TGAAAAACTTTGGACGGAATTAAATTGGAGTATTATTGCTCAATATGCTATCAATGCAGGATATTGTATTAAATTACCTT
TTTGGACAAAAAGCGAAGAATTACGTACTAATCGGTTAGCGAGATTACATTGCAATCAAATAATAATATTACCAAAATTA
ACGCTACAAGAGATTGCTATCCAAATATCTGGAGCAACAGCTGTAATCTCTGTTGATACTGGACTTAGTCATTTGACAGC
AGCGCTCGGTTGTCCTAATATTACATTGTATGGACCAACTAATCCTAAATTGATCGGAACATATGGACAGAACCAAATTG
TTTTACGATCTTCAACTAAAAAAATGCAACACTTAACCCCTATACACGTTTGGAACTCATTACAAAAAATTTTAAATTTA
AAATATATTTAA

Upstream 100 bases:

>100_bases
TTTATATGGTTATCATAACAGTTTAATAGATATTACTCCAGATCAAGTTTTAAAGGCATTAAAAACATTATTATATTGAT
CAATCAAAAAGATAATTATC

Downstream 100 bases:

>100_bases
AAAATATTTTTTTAAACTTGTTTATATAAACCTTATATTAATTTTAATGCTTTCATTATAAATTGATATTTTTTGTTTGA
TAACAAAAAATATCAATCCG

Product: ADP-heptose; LPS heptosyl transferase I

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 323; Mature: 323

Protein sequence:

>323_residues
MKVLIIKISSMGDIIHTLPAVTDASNIVPNILFDWIVEETFSDILRWHPGIHHIIPINLRFWIKKWYKLSSWKKYRECCI
QLKKKYDVIIDAQGLLKTSLLVTYMTCGKKHGMDYMSVREPMSSLFYHERHYSNKNQHAVERIRQLFSLSLKYPIPSYIG
KYNIEHLFPPQKHHAPYLIFFHSTTKFEKLWTELNWSIIAQYAINAGYCIKLPFWTKSEELRTNRLARLHCNQIIILPKL
TLQEIAIQISGATAVISVDTGLSHLTAALGCPNITLYGPTNPKLIGTYGQNQIVLRSSTKKMQHLTPIHVWNSLQKILNL
KYI

Sequences:

>Translated_323_residues
MKVLIIKISSMGDIIHTLPAVTDASNIVPNILFDWIVEETFSDILRWHPGIHHIIPINLRFWIKKWYKLSSWKKYRECCI
QLKKKYDVIIDAQGLLKTSLLVTYMTCGKKHGMDYMSVREPMSSLFYHERHYSNKNQHAVERIRQLFSLSLKYPIPSYIG
KYNIEHLFPPQKHHAPYLIFFHSTTKFEKLWTELNWSIIAQYAINAGYCIKLPFWTKSEELRTNRLARLHCNQIIILPKL
TLQEIAIQISGATAVISVDTGLSHLTAALGCPNITLYGPTNPKLIGTYGQNQIVLRSSTKKMQHLTPIHVWNSLQKILNL
KYI
>Mature_323_residues
MKVLIIKISSMGDIIHTLPAVTDASNIVPNILFDWIVEETFSDILRWHPGIHHIIPINLRFWIKKWYKLSSWKKYRECCI
QLKKKYDVIIDAQGLLKTSLLVTYMTCGKKHGMDYMSVREPMSSLFYHERHYSNKNQHAVERIRQLFSLSLKYPIPSYIG
KYNIEHLFPPQKHHAPYLIFFHSTTKFEKLWTELNWSIIAQYAINAGYCIKLPFWTKSEELRTNRLARLHCNQIIILPKL
TLQEIAIQISGATAVISVDTGLSHLTAALGCPNITLYGPTNPKLIGTYGQNQIVLRSSTKKMQHLTPIHVWNSLQKILNL
KYI

Specific function: Heptose transfer to the lipopolysaccharide core. It transfers the innnermost heptose to [4'-P](3-deoxy-D-manno- octulosonic acid)2-IVA [H]

COG id: COG0859

COG function: function code M; ADP-heptose:LPS heptosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 9 family [H]

Homologues:

Organism=Escherichia coli, GI1790051, Length=322, Percent_Identity=45.0310559006211, Blast_Score=289, Evalue=2e-79,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002201
- InterPro:   IPR011908 [H]

Pfam domain/function: PF01075 Glyco_transf_9 [H]

EC number: 2.4.1.-

Molecular weight: Translated: 37527; Mature: 37527

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVLIIKISSMGDIIHTLPAVTDASNIVPNILFDWIVEETFSDILRWHPGIHHIIPINLR
CEEEEEEECCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHH
FWIKKWYKLSSWKKYRECCIQLKKKYDVIIDAQGLLKTSLLVTYMTCGKKHGMDYMSVRE
HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECHHHHHHHHHHHHHHHCHHCCCCHHHHHH
PMSSLFYHERHYSNKNQHAVERIRQLFSLSLKYPIPSYIGKYNIEHLFPPQKHHAPYLIF
HHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCCCCCEEEE
FHSTTKFEKLWTELNWSIIAQYAINAGYCIKLPFWTKSEELRTNRLARLHCNQIIILPKL
EECCCHHHHHHHHCCHHHEEEECCCCCEEEEECCCCCCHHHHHHHHHEEECCEEEEECCC
TLQEIAIQISGATAVISVDTGLSHLTAALGCPNITLYGPTNPKLIGTYGQNQIVLRSSTK
CHHHHEEEECCCEEEEEECCCHHHHHHHHCCCCEEEECCCCCCEEEECCCCEEEEECCHH
KMQHLTPIHVWNSLQKILNLKYI
HHHHCCHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKVLIIKISSMGDIIHTLPAVTDASNIVPNILFDWIVEETFSDILRWHPGIHHIIPINLR
CEEEEEEECCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHH
FWIKKWYKLSSWKKYRECCIQLKKKYDVIIDAQGLLKTSLLVTYMTCGKKHGMDYMSVRE
HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECHHHHHHHHHHHHHHHCHHCCCCHHHHHH
PMSSLFYHERHYSNKNQHAVERIRQLFSLSLKYPIPSYIGKYNIEHLFPPQKHHAPYLIF
HHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCCCCCEEEE
FHSTTKFEKLWTELNWSIIAQYAINAGYCIKLPFWTKSEELRTNRLARLHCNQIIILPKL
EECCCHHHHHHHHCCHHHEEEECCCCCEEEEECCCCCCHHHHHHHHHEEECCEEEEECCC
TLQEIAIQISGATAVISVDTGLSHLTAALGCPNITLYGPTNPKLIGTYGQNQIVLRSSTK
CHHHHEEEECCCEEEEEECCCHHHHHHHHCCCCEEEECCCCCCEEEECCCCEEEEECCHH
KMQHLTPIHVWNSLQKILNLKYI
HHHHCCHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1527014; 11677609; 1657881 [H]