Definition | Candidatus Blochmannia pennsylvanicus str. BPEN, complete genome. |
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Accession | NC_007292 |
Length | 791,654 |
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The map label for this gene is gltX
Identifier: 71892276
GI number: 71892276
Start: 623765
End: 625171
Strand: Reverse
Name: gltX
Synonym: BPEN_521
Alternate gene names: 71892276
Gene position: 625171-623765 (Counterclockwise)
Preceding gene: 71892277
Following gene: 71892274
Centisome position: 78.97
GC content: 30.77
Gene sequence:
>1407_bases ATGAATATTAAAACTCGATTCGCACCCAGTCCTACAGGTTCCATACATATTGGAAATATTCGCACTGCTTTGTATTCTTG GTTGTTTGCTCGAAAGCAAGGTGGTAAATTTTTATTACGTATAGAAGATTCTGATTTGCAACGTTCTATAGATGATACAG TTGAGCTGATTGTTGCAGGGATGCGTTGGCTTAGTTTAGATTGGGATGAAGGTCCTTATTTTCAAACTAATAGGTTTAGT CGTTACAATAGTATAATAAGTTATATGATTCAACATGATATGGCTTATAAGTGTTATTGTTCATCAGAAAGATTAGAATC GTTGCGATCAAATCAAATAAAAAACGGAGAAAAACCTAAATATGATGGTTATTGTCGTTTTAAATCTACGGATATATATA GTTCTTCTATTAGTTCTTATGTGGTACGTTTTTGTAATCCTCAGGATGGCGTAGTAATATTTCATGATCAAATCAGAGGT ACAATTACATTTAATAACAAAGAATTAGATGATCTAATTATCCGCAGAGCCGATGGTTCTCCAACGTATAATTTTTGCGT TGTAATAGACGATATGGATATGCAAATTACTCACATCATACGAGGTGAAGAACACATTAATAATACTCCGCGTCAGATTA ATATTTTAAAAGCATTGCGAGCTCCGATACCAACGTATGCTCATGTCTCAATGATATTAGATAATAATTTAAAAAAATTA TCAAAACGCTGTGGAACATTGGGTATTATGCAATATCGTAATGATGGATTTCTCCCTGAAGCAATACTTAATTATTTGGT AAGGTTAGGATGGTCGCATGGAGATCAAGAAATTTTTAGTATTGAAGAGATGATAAAATATTTTGATTTGAGTAGAATTA GTAAATCTCCTAGTATTTTAAATCTTGAAAAATTACTTTGGTTGAATCATTATTATATTAATCATTTACCAATAGACTAC GTAGCTTCACATTTATCATGGCATATGCATCAGCAAAAAATCAATATACAAAATGGTCCAAAATTAACTGATATAATAAA ATTATTTGCAAGACGTTCACGTACATTAAAAGAAATTGTAAATAATTGTCTATATTTTTATATAGATTTTGATTTATTCG ATAATAAGGTAGCTAAAGATTATTTAAAACCTGTTGCGATAACACCATTAAAATTTTTAAGAAAAAAATTCAGTAATATA GTTGATTGGACACCAGAGATTATTAAATCTATAATTATAGAAACCGTCAATGAATTTAATACTAGCATAGATAAAATAGG TATGCCGCTTCGTGTAGCATTAACCGGAACAAATTGTTCACCAACGCTTAGTATTACCATACATGCAATTGGTCAGTCTC GTGTATTAGAGCGTATTGATCAGGCTATACGCTATATTTCTACATAG
Upstream 100 bases:
>100_bases GATTTTTTAATTGTATTTTATTAATGTGAAAACAAAATTTCATTTTGTATTGACTTAAATGAAAATTTAATGATTATCTA CAGTCAGGTACTTAATTTTT
Downstream 100 bases:
>100_bases TATTAGATGGGAATATAAAAACAATAATTGTTGTGCATATACTTACTTTTAATTATATCATGTTAAGGTCATATCGGCTA TAATATGGAGTTTTAATAGT
Product: glutamate tRNA synthetase, catalytic subunit
Products: NA
Alternate protein names: Glutamate--tRNA ligase; GluRS
Number of amino acids: Translated: 468; Mature: 468
Protein sequence:
>468_residues MNIKTRFAPSPTGSIHIGNIRTALYSWLFARKQGGKFLLRIEDSDLQRSIDDTVELIVAGMRWLSLDWDEGPYFQTNRFS RYNSIISYMIQHDMAYKCYCSSERLESLRSNQIKNGEKPKYDGYCRFKSTDIYSSSISSYVVRFCNPQDGVVIFHDQIRG TITFNNKELDDLIIRRADGSPTYNFCVVIDDMDMQITHIIRGEEHINNTPRQINILKALRAPIPTYAHVSMILDNNLKKL SKRCGTLGIMQYRNDGFLPEAILNYLVRLGWSHGDQEIFSIEEMIKYFDLSRISKSPSILNLEKLLWLNHYYINHLPIDY VASHLSWHMHQQKINIQNGPKLTDIIKLFARRSRTLKEIVNNCLYFYIDFDLFDNKVAKDYLKPVAITPLKFLRKKFSNI VDWTPEIIKSIIIETVNEFNTSIDKIGMPLRVALTGTNCSPTLSITIHAIGQSRVLERIDQAIRYIST
Sequences:
>Translated_468_residues MNIKTRFAPSPTGSIHIGNIRTALYSWLFARKQGGKFLLRIEDSDLQRSIDDTVELIVAGMRWLSLDWDEGPYFQTNRFS RYNSIISYMIQHDMAYKCYCSSERLESLRSNQIKNGEKPKYDGYCRFKSTDIYSSSISSYVVRFCNPQDGVVIFHDQIRG TITFNNKELDDLIIRRADGSPTYNFCVVIDDMDMQITHIIRGEEHINNTPRQINILKALRAPIPTYAHVSMILDNNLKKL SKRCGTLGIMQYRNDGFLPEAILNYLVRLGWSHGDQEIFSIEEMIKYFDLSRISKSPSILNLEKLLWLNHYYINHLPIDY VASHLSWHMHQQKINIQNGPKLTDIIKLFARRSRTLKEIVNNCLYFYIDFDLFDNKVAKDYLKPVAITPLKFLRKKFSNI VDWTPEIIKSIIIETVNEFNTSIDKIGMPLRVALTGTNCSPTLSITIHAIGQSRVLERIDQAIRYIST >Mature_468_residues MNIKTRFAPSPTGSIHIGNIRTALYSWLFARKQGGKFLLRIEDSDLQRSIDDTVELIVAGMRWLSLDWDEGPYFQTNRFS RYNSIISYMIQHDMAYKCYCSSERLESLRSNQIKNGEKPKYDGYCRFKSTDIYSSSISSYVVRFCNPQDGVVIFHDQIRG TITFNNKELDDLIIRRADGSPTYNFCVVIDDMDMQITHIIRGEEHINNTPRQINILKALRAPIPTYAHVSMILDNNLKKL SKRCGTLGIMQYRNDGFLPEAILNYLVRLGWSHGDQEIFSIEEMIKYFDLSRISKSPSILNLEKLLWLNHYYINHLPIDY VASHLSWHMHQQKINIQNGPKLTDIIKLFARRSRTLKEIVNNCLYFYIDFDLFDNKVAKDYLKPVAITPLKFLRKKFSNI VDWTPEIIKSIIIETVNEFNTSIDKIGMPLRVALTGTNCSPTLSITIHAIGQSRVLERIDQAIRYIST
Specific function: Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction:glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
COG id: COG0008
COG function: function code J; Glutamyl- and glutaminyl-tRNA synthetases
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family
Homologues:
Organism=Homo sapiens, GI134288884, Length=330, Percent_Identity=32.7272727272727, Blast_Score=204, Evalue=2e-52, Organism=Escherichia coli, GI1788743, Length=467, Percent_Identity=61.4561027837259, Blast_Score=640, Evalue=0.0, Organism=Escherichia coli, GI226510925, Length=239, Percent_Identity=33.8912133891213, Blast_Score=139, Evalue=5e-34, Organism=Caenorhabditis elegans, GI71993394, Length=317, Percent_Identity=38.801261829653, Blast_Score=206, Evalue=2e-53, Organism=Saccharomyces cerevisiae, GI6324540, Length=494, Percent_Identity=29.3522267206478, Blast_Score=219, Evalue=5e-58, Organism=Saccharomyces cerevisiae, GI6321192, Length=231, Percent_Identity=25.1082251082251, Blast_Score=69, Evalue=1e-12, Organism=Drosophila melanogaster, GI24665321, Length=488, Percent_Identity=29.0983606557377, Blast_Score=219, Evalue=3e-57,
Paralogues:
None
Copy number: 1,800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): SYE_BLOPB (Q492G6)
Other databases:
- EMBL: CP000016 - RefSeq: YP_278010.1 - ProteinModelPortal: Q492G6 - SMR: Q492G6 - STRING: Q492G6 - GeneID: 3562945 - GenomeReviews: CP000016_GR - KEGG: bpn:BPEN_521 - eggNOG: COG0008 - HOGENOM: HBG628189 - OMA: NEIFAKR - BioCyc: CBLO291272:BPEN_521-MONOMER - GO: GO:0005737 - HAMAP: MF_00022_B - InterPro: IPR008925 - InterPro: IPR020751 - InterPro: IPR001412 - InterPro: IPR004527 - InterPro: IPR000924 - InterPro: IPR020061 - InterPro: IPR020058 - InterPro: IPR014729 - Gene3D: G3DSA:1.10.1160.10 - Gene3D: G3DSA:3.40.50.620 - Gene3D: G3DSA:1.10.10.350 - PANTHER: PTHR10119 - PRINTS: PR00987 - TIGRFAMs: TIGR00464
Pfam domain/function: PF00749 tRNA-synt_1c; SSF48163 tRNA-synt_bind
EC number: =6.1.1.17
Molecular weight: Translated: 54323; Mature: 54323
Theoretical pI: Translated: 9.02; Mature: 9.02
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: BINDING 242-242
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIKTRFAPSPTGSIHIGNIRTALYSWLFARKQGGKFLLRIEDSDLQRSIDDTVELIVAG CCCCCCCCCCCCCCEEECHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHH MRWLSLDWDEGPYFQTNRFSRYNSIISYMIQHDMAYKCYCSSERLESLRSNQIKNGEKPK HHHEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCEEEEEECHHHHHHHHHHCCCCCCCCC YDGYCRFKSTDIYSSSISSYVVRFCNPQDGVVIFHDQIRGTITFNNKELDDLIIRRADGS CCCEEEEECCCHHHHHHHHHHHHHCCCCCCEEEEEECCEEEEEECCCCHHHHHEECCCCC PTYNFCVVIDDMDMQITHIIRGEEHINNTPRQINILKALRAPIPTYAHVSMILDNNLKKL CCEEEEEEEECCCCEEHHEECCHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHCCHHHH SKRCGTLGIMQYRNDGFLPEAILNYLVRLGWSHGDQEIFSIEEMIKYFDLSRISKSPSIL HHHHCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC NLEKLLWLNHYYINHLPIDYVASHLSWHMHQQKINIQNGPKLTDIIKLFARRSRTLKEIV CHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHH NNCLYFYIDFDLFDNKVAKDYLKPVAITPLKFLRKKFSNIVDWTPEIIKSIIIETVNEFN HCCEEEEEEEEHHCCHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHC TSIDKIGMPLRVALTGTNCSPTLSITIHAIGQSRVLERIDQAIRYIST CHHHHCCCCEEEEEECCCCCCEEEEEEEECCHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNIKTRFAPSPTGSIHIGNIRTALYSWLFARKQGGKFLLRIEDSDLQRSIDDTVELIVAG CCCCCCCCCCCCCCEEECHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHH MRWLSLDWDEGPYFQTNRFSRYNSIISYMIQHDMAYKCYCSSERLESLRSNQIKNGEKPK HHHEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCEEEEEECHHHHHHHHHHCCCCCCCCC YDGYCRFKSTDIYSSSISSYVVRFCNPQDGVVIFHDQIRGTITFNNKELDDLIIRRADGS CCCEEEEECCCHHHHHHHHHHHHHCCCCCCEEEEEECCEEEEEECCCCHHHHHEECCCCC PTYNFCVVIDDMDMQITHIIRGEEHINNTPRQINILKALRAPIPTYAHVSMILDNNLKKL CCEEEEEEEECCCCEEHHEECCHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHCCHHHH SKRCGTLGIMQYRNDGFLPEAILNYLVRLGWSHGDQEIFSIEEMIKYFDLSRISKSPSIL HHHHCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC NLEKLLWLNHYYINHLPIDYVASHLSWHMHQQKINIQNGPKLTDIIKLFARRSRTLKEIV CHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHH NNCLYFYIDFDLFDNKVAKDYLKPVAITPLKFLRKKFSNIVDWTPEIIKSIIIETVNEFN HCCEEEEEEEEHHCCHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHC TSIDKIGMPLRVALTGTNCSPTLSITIHAIGQSRVLERIDQAIRYIST CHHHHCCCCEEEEEECCCCCCEEEEEEEECCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA