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The map label for this gene is yebA [H]

Identifier: 71892228

GI number: 71892228

Start: 555204

End: 556562

Strand: Reverse

Name: yebA [H]

Synonym: BPEN_466

Alternate gene names: 71892228

Gene position: 556562-555204 (Counterclockwise)

Preceding gene: 71892229

Following gene: 71892226

Centisome position: 70.3

GC content: 30.32

Gene sequence:

>1359_bases
GTGCGTAGTATTATTGTTAGTTCTATTAAGTTATTATATCGTTATATGTATAAACATTATTTTGTAATGGTATTTGTGTT
TCTGTTAATGATTGTGATTGTAATGGTTTGTGAAGTTTTTACTTCATGTATGTTGAATAAAAATAAAAAAAATTCTAGCA
AAGCACTTCTTATTAAGAACCATGAGTTTCATCAATTTGAAATTATGAAAAATGGAAAATTTTTCAATAATGTGATGGTT
CATTCTAATATTTTGAAGAAACACTGGTGTTTTAATGAATCATTAAGAGACATAAACATGTATAACTATACAGTATCTCA
GAATGAGATATTGAGTAAAATTTTAATAAAATATAGTAACAATGGTATCGATGCTTCTGAAATTACTCTTTTACTACAAC
AGTATCCAGTATTAAGACAGATAAAAACGGGGCAAATACTTTCTTGGATAATAATTACAAAAAAAAAATTACAATGTTTA
GTGTGGGATATTTTTCCGCAGGAAATTCGTGTCTACAATCGCATGAATACTAGTTTTACAGAAGGAATTATTAGATTTTC
AAATCAATTAAATGATGGGTTATCTCCTTCAATTTTATTTATAGGTAAATTAAGTGGAACATTTATTGATAGCGCTCGTT
CTTTAGGTATAGAGGAAAATTGTATTATGGATATAACCAATGCATTACAATATCAATTAGATTTTCACAAACTACATCAG
GGAGATAGATTTTCTGTATTAATATCAATAATGATGAATGATGATCATAGTATTAAAAGTAAATTACTTGGAGCGAGATT
GTGTACTGCTGGTAAAGACTACTATGTGTTTCGCGCAAATAACGGTAAATTGTATGATCGTGAAGCTGTAAGATTAGGGG
GTAATTTTATACGATTTCCTACATTAAAACCATTTCGTGTGTCTTCTAATTTTAATTTAAATAGATTGAATCCTGTGACT
GGTCAAGTATCCCCCCATGCTGGAGTTGATTTCGCCGTTCCAATAGGTACCCCTGTTGTATCTGTAGGAGATGGAGAAGT
TATCGTCAGCGCATATAGTAAAATTGCTGGTAATTATGTGGCAATTAGGCACAATTGTCATTGTACAACTCGATATATGC
ATTTAAAAAAGTTATTAGTTAAACCTGGACAAAGAGTGAAATTAGGTGACAACATAGCGCTATCTGGAAATACGGGTCGA
TCGACAGGGCCTCATTTACATTTTGAAATATGGATCAATCATCGTCCCGTAAACCCATTAACTACTACATTATTAAATTT
TGAGAAGTTATTAGGACATGAACGTACGATATATTTAAATCAAGTAAAAGAAATGCTTCCTCACTTATGTTTTGATTAG

Upstream 100 bases:

>100_bases
AAAATTAAAGTCATTTTTATTATTTTCTGTAATAATTTCTTTTAATTTTGGTCAAAATGACTCTCTTTTTGTTGGAGATC
GTAATATAGGCTATTAATTA

Downstream 100 bases:

>100_bases
ATGTATTTAATTTTATAATTTTTTAAGCAATATGGTTTTTATTTAGTTTCTTTTTTAAGATAGTTTATGCACATGCATGC
GGGGTTTTTTAAGTAATATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 452; Mature: 452

Protein sequence:

>452_residues
MRSIIVSSIKLLYRYMYKHYFVMVFVFLLMIVIVMVCEVFTSCMLNKNKKNSSKALLIKNHEFHQFEIMKNGKFFNNVMV
HSNILKKHWCFNESLRDINMYNYTVSQNEILSKILIKYSNNGIDASEITLLLQQYPVLRQIKTGQILSWIIITKKKLQCL
VWDIFPQEIRVYNRMNTSFTEGIIRFSNQLNDGLSPSILFIGKLSGTFIDSARSLGIEENCIMDITNALQYQLDFHKLHQ
GDRFSVLISIMMNDDHSIKSKLLGARLCTAGKDYYVFRANNGKLYDREAVRLGGNFIRFPTLKPFRVSSNFNLNRLNPVT
GQVSPHAGVDFAVPIGTPVVSVGDGEVIVSAYSKIAGNYVAIRHNCHCTTRYMHLKKLLVKPGQRVKLGDNIALSGNTGR
STGPHLHFEIWINHRPVNPLTTTLLNFEKLLGHERTIYLNQVKEMLPHLCFD

Sequences:

>Translated_452_residues
MRSIIVSSIKLLYRYMYKHYFVMVFVFLLMIVIVMVCEVFTSCMLNKNKKNSSKALLIKNHEFHQFEIMKNGKFFNNVMV
HSNILKKHWCFNESLRDINMYNYTVSQNEILSKILIKYSNNGIDASEITLLLQQYPVLRQIKTGQILSWIIITKKKLQCL
VWDIFPQEIRVYNRMNTSFTEGIIRFSNQLNDGLSPSILFIGKLSGTFIDSARSLGIEENCIMDITNALQYQLDFHKLHQ
GDRFSVLISIMMNDDHSIKSKLLGARLCTAGKDYYVFRANNGKLYDREAVRLGGNFIRFPTLKPFRVSSNFNLNRLNPVT
GQVSPHAGVDFAVPIGTPVVSVGDGEVIVSAYSKIAGNYVAIRHNCHCTTRYMHLKKLLVKPGQRVKLGDNIALSGNTGR
STGPHLHFEIWINHRPVNPLTTTLLNFEKLLGHERTIYLNQVKEMLPHLCFD
>Mature_452_residues
MRSIIVSSIKLLYRYMYKHYFVMVFVFLLMIVIVMVCEVFTSCMLNKNKKNSSKALLIKNHEFHQFEIMKNGKFFNNVMV
HSNILKKHWCFNESLRDINMYNYTVSQNEILSKILIKYSNNGIDASEITLLLQQYPVLRQIKTGQILSWIIITKKKLQCL
VWDIFPQEIRVYNRMNTSFTEGIIRFSNQLNDGLSPSILFIGKLSGTFIDSARSLGIEENCIMDITNALQYQLDFHKLHQ
GDRFSVLISIMMNDDHSIKSKLLGARLCTAGKDYYVFRANNGKLYDREAVRLGGNFIRFPTLKPFRVSSNFNLNRLNPVT
GQVSPHAGVDFAVPIGTPVVSVGDGEVIVSAYSKIAGNYVAIRHNCHCTTRYMHLKKLLVKPGQRVKLGDNIALSGNTGR
STGPHLHFEIWINHRPVNPLTTTLLNFEKLLGHERTIYLNQVKEMLPHLCFD

Specific function: Could be involved in cell wall degradation or formation [H]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 LysM repeat [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=448, Percent_Identity=41.7410714285714, Blast_Score=366, Evalue=1e-102,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR013731
- InterPro:   IPR016047
- InterPro:   IPR002886
- InterPro:   IPR018392
- InterPro:   IPR002482 [H]

Pfam domain/function: PF01476 LysM; PF08525 OapA_N; PF01551 Peptidase_M23 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 51896; Mature: 51896

Theoretical pI: Translated: 9.97; Mature: 9.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSIIVSSIKLLYRYMYKHYFVMVFVFLLMIVIVMVCEVFTSCMLNKNKKNSSKALLIKN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEC
HEFHQFEIMKNGKFFNNVMVHSNILKKHWCFNESLRDINMYNYTVSQNEILSKILIKYSN
CCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHHHHHCCC
NGIDASEITLLLQQYPVLRQIKTGQILSWIIITKKKLQCLVWDIFPQEIRVYNRMNTSFT
CCCCHHHHHHHHHHCHHHHHCCCCCEEEEEEEEHHHHEEEEEECCHHHHHHHHHCCCHHH
EGIIRFSNQLNDGLSPSILFIGKLSGTFIDSARSLGIEENCIMDITNALQYQLDFHKLHQ
HHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHCC
GDRFSVLISIMMNDDHSIKSKLLGARLCTAGKDYYVFRANNGKLYDREAVRLGGNFIRFP
CCCEEEEEEEEECCCHHHHHHHHHHHHHCCCCCEEEEECCCCCEECCHHHHHCCCEEECC
TLKPFRVSSNFNLNRLNPVTGQVSPHAGVDFAVPIGTPVVSVGDGEVIVSAYSKIAGNYV
CCCCEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEECCCCCHHHHHHHHCCCEE
AIRHNCHCTTRYMHLKKLLVKPGQRVKLGDNIALSGNTGRSTGPHLHFEIWINHRPVNPL
EEEECCCHHHHHHHHHHHHHCCCCEEEECCEEEEECCCCCCCCCEEEEEEEEECCCCCHH
TTTLLNFEKLLGHERTIYLNQVKEMLPHLCFD
HHHHHHHHHHHCCCCEEEHHHHHHHHHHHCCC
>Mature Secondary Structure
MRSIIVSSIKLLYRYMYKHYFVMVFVFLLMIVIVMVCEVFTSCMLNKNKKNSSKALLIKN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEC
HEFHQFEIMKNGKFFNNVMVHSNILKKHWCFNESLRDINMYNYTVSQNEILSKILIKYSN
CCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHHHHHCCC
NGIDASEITLLLQQYPVLRQIKTGQILSWIIITKKKLQCLVWDIFPQEIRVYNRMNTSFT
CCCCHHHHHHHHHHCHHHHHCCCCCEEEEEEEEHHHHEEEEEECCHHHHHHHHHCCCHHH
EGIIRFSNQLNDGLSPSILFIGKLSGTFIDSARSLGIEENCIMDITNALQYQLDFHKLHQ
HHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHCC
GDRFSVLISIMMNDDHSIKSKLLGARLCTAGKDYYVFRANNGKLYDREAVRLGGNFIRFP
CCCEEEEEEEEECCCHHHHHHHHHHHHHCCCCCEEEEECCCCCEECCHHHHHCCCEEECC
TLKPFRVSSNFNLNRLNPVTGQVSPHAGVDFAVPIGTPVVSVGDGEVIVSAYSKIAGNYV
CCCCEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEECCCCCHHHHHHHHCCCEE
AIRHNCHCTTRYMHLKKLLVKPGQRVKLGDNIALSGNTGRSTGPHLHFEIWINHRPVNPL
EEEECCCHHHHHHHHHHHHHCCCCEEEECCEEEEECCCCCCCCCEEEEEEEEECCCCCHH
TTTLLNFEKLLGHERTIYLNQVKEMLPHLCFD
HHHHHHHHHHHCCCCEEEHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]