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The map label for this gene is sufD [H]

Identifier: 71892140

GI number: 71892140

Start: 440045

End: 441334

Strand: Direct

Name: sufD [H]

Synonym: BPEN_372

Alternate gene names: 71892140

Gene position: 440045-441334 (Clockwise)

Preceding gene: 71892139

Following gene: 71892141

Centisome position: 55.59

GC content: 29.15

Gene sequence:

>1290_bases
ATGGTTGGTTGTCTGGATAACAAAAATCGAGTATTAAACGAATGGTACGGATTATTTAAACAAAAAAATAATATTAATCC
AAATTTAGCACACAAATATTGGGAACGTATTAAAATACTTGGATTACCAAATATTAAAAAAGATAGCTGGAAATATACTG
CATTTGAAGAGTTTTTAACATATAATTTTGAATTTTCTAAAAATTTTGAATTAAATACTCCGCAACATGAAAAATTAAGT
TTTCCAATAGATGCTTATCGCTTAACATTTATTAACGGTCTATTTTCACCTGAATTAAGTGATAAAAATATCGATCCATG
GATCCTCAAAATCAATCGTGACCCCAATCGTCATAATATGACTAATCCCATTCAACCAGACATGTTTTTATATTTAACTG
AATGCTTAAGTGATGCAACAATACACATAAATTTACCTACGAAAAAAATCACAAAAAAACCATTATATTTACTATATATT
AATGAAGGATCTGACATAAAAAATAAATTAGTTACATCTCATTATCATCACCATCTTCAAATCGGGAACGACTCTAACAC
ATGCGTCATAGAACATTTTATTAGTATAAATAAAAACGGACATTTCAGTGGCGCGCGTATGTCTATGACAACAGGAAACC
GATCTAAATTAGACCATGTCAAATTAATATTTGAAAACAATGCAAGTTATCATATAGCACATAATGATATTAATGTAGGA
CAATCTTCAAATGTAAACAGTAGTATCTTTGTTATTCTTGGTCCTAAATTTATATCCCATCGAACCAGCGCTCAAATCAA
TCACTCAGGATCATCTTTATCATTAAATAGTTTACTTTTTCTATCAGAACAAGATATCGGAAACATATGTACTTATTTAG
AACACAATAATCGAGAATACGCTTCAAGCAGGCAATTACATAAAATAATAGCATGTAATTACAGCGCCGGTGTGTTCAAT
GGGCTAATAAAAGTAAATCCAGATTCTATAAAAACTGATGGAATAATGATAAACAATAATTTGTTGTTGAACCAAGATGC
AACTATTCATAGTATACCTAAACTTGAAATTTACTCAGACGATGTAAAATGTAGTCATGGAGCAACAATAGGCCACATTG
ATACTAATCAGCTATTTTATCTAAGTACACGTGGTATTCCAAAAAAAGATGCTTTAAAAATGCTTATTTATGCTTTTGCT
ATTGAAATTATAGGATCAATTGAAAATACTATACTACAGGATCTTGTATTAAAAAGATTTAATAAAGCTTTAGCAAGGAT
CATAATATGA

Upstream 100 bases:

>100_bases
TTAGAGTATATTAAACCGAATTATGTTCATGTGCTACATAAAGGTCATATTGTAAAATCTGGTGATATCTCTTTAGTCAA
ACAGCTTGAGGAAAAAGGCT

Downstream 100 bases:

>100_bases
TAATCTATCCTATAGAAAAAATTAGATCAGATTTTCCTATATTAAACCGAATGATAAATAAATACCCTCTTACTTATCTT
GATAGCGCCGCATCTGCTCA

Product: cysteine desulfurase activator complex subunit SufD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 429; Mature: 429

Protein sequence:

>429_residues
MVGCLDNKNRVLNEWYGLFKQKNNINPNLAHKYWERIKILGLPNIKKDSWKYTAFEEFLTYNFEFSKNFELNTPQHEKLS
FPIDAYRLTFINGLFSPELSDKNIDPWILKINRDPNRHNMTNPIQPDMFLYLTECLSDATIHINLPTKKITKKPLYLLYI
NEGSDIKNKLVTSHYHHHLQIGNDSNTCVIEHFISINKNGHFSGARMSMTTGNRSKLDHVKLIFENNASYHIAHNDINVG
QSSNVNSSIFVILGPKFISHRTSAQINHSGSSLSLNSLLFLSEQDIGNICTYLEHNNREYASSRQLHKIIACNYSAGVFN
GLIKVNPDSIKTDGIMINNNLLLNQDATIHSIPKLEIYSDDVKCSHGATIGHIDTNQLFYLSTRGIPKKDALKMLIYAFA
IEIIGSIENTILQDLVLKRFNKALARIII

Sequences:

>Translated_429_residues
MVGCLDNKNRVLNEWYGLFKQKNNINPNLAHKYWERIKILGLPNIKKDSWKYTAFEEFLTYNFEFSKNFELNTPQHEKLS
FPIDAYRLTFINGLFSPELSDKNIDPWILKINRDPNRHNMTNPIQPDMFLYLTECLSDATIHINLPTKKITKKPLYLLYI
NEGSDIKNKLVTSHYHHHLQIGNDSNTCVIEHFISINKNGHFSGARMSMTTGNRSKLDHVKLIFENNASYHIAHNDINVG
QSSNVNSSIFVILGPKFISHRTSAQINHSGSSLSLNSLLFLSEQDIGNICTYLEHNNREYASSRQLHKIIACNYSAGVFN
GLIKVNPDSIKTDGIMINNNLLLNQDATIHSIPKLEIYSDDVKCSHGATIGHIDTNQLFYLSTRGIPKKDALKMLIYAFA
IEIIGSIENTILQDLVLKRFNKALARIII
>Mature_429_residues
MVGCLDNKNRVLNEWYGLFKQKNNINPNLAHKYWERIKILGLPNIKKDSWKYTAFEEFLTYNFEFSKNFELNTPQHEKLS
FPIDAYRLTFINGLFSPELSDKNIDPWILKINRDPNRHNMTNPIQPDMFLYLTECLSDATIHINLPTKKITKKPLYLLYI
NEGSDIKNKLVTSHYHHHLQIGNDSNTCVIEHFISINKNGHFSGARMSMTTGNRSKLDHVKLIFENNASYHIAHNDINVG
QSSNVNSSIFVILGPKFISHRTSAQINHSGSSLSLNSLLFLSEQDIGNICTYLEHNNREYASSRQLHKIIACNYSAGVFN
GLIKVNPDSIKTDGIMINNNLLLNQDATIHSIPKLEIYSDDVKCSHGATIGHIDTNQLFYLSTRGIPKKDALKMLIYAFA
IEIIGSIENTILQDLVLKRFNKALARIII

Specific function: The sufBCD complex acts synergistically with sufE to stimulate the cysteine desulfurase activity of sufS. The sufBCD complex contributes to the assembly or repair of oxygen-labile iron-sulfur clusters under oxidative stress. May facilitate iron uptake fro

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

Organism=Escherichia coli, GI1787971, Length=425, Percent_Identity=39.2941176470588, Blast_Score=307, Evalue=1e-84,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000825
- InterPro:   IPR011542 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 49004; Mature: 49004

Theoretical pI: Translated: 8.86; Mature: 8.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVGCLDNKNRVLNEWYGLFKQKNNINPNLAHKYWERIKILGLPNIKKDSWKYTAFEEFLT
CCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHEEEEECCCCCCCCCCHHEEHHHHE
YNFEFSKNFELNTPQHEKLSFPIDAYRLTFINGLFSPELSDKNIDPWILKINRDPNRHNM
EEEEECCCCCCCCCCCCEECCCHHHEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCC
TNPIQPDMFLYLTECLSDATIHINLPTKKITKKPLYLLYINEGSDIKNKLVTSHYHHHLQ
CCCCCCHHHHHHHHHHCCCEEEEECCHHHHCCCCEEEEEECCCCCHHHHHHHHCCEEEEE
IGNDSNTCVIEHFISINKNGHFSGARMSMTTGNRSKLDHVKLIFENNASYHIAHNDINVG
ECCCCCEEEEEEEEEECCCCCCCCEEEEEECCCCCCCCEEEEEEECCCEEEEEECCCCCC
QSSNVNSSIFVILGPKFISHRTSAQINHSGSSLSLNSLLFLSEQDIGNICTYLEHNNREY
CCCCCCCEEEEEECCHHHCCCCCCEEECCCCCEEEEEEEEEECCCCCHHHHHHCCCCCHH
ASSRQLHKIIACNYSAGVFNGLIKVNPDSIKTDGIMINNNLLLNQDATIHSIPKLEIYSD
HHHHHEEEEEEECCCCHHHCCEEEECCCCCCCCCEEEECCEEECCCCCEECCCEEEEECC
DVKCSHGATIGHIDTNQLFYLSTRGIPKKDALKMLIYAFAIEIIGSIENTILQDLVLKRF
CCEECCCCEEEEECCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NKALARIII
HHHHHHHCC
>Mature Secondary Structure
MVGCLDNKNRVLNEWYGLFKQKNNINPNLAHKYWERIKILGLPNIKKDSWKYTAFEEFLT
CCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHEEEEECCCCCCCCCCHHEEHHHHE
YNFEFSKNFELNTPQHEKLSFPIDAYRLTFINGLFSPELSDKNIDPWILKINRDPNRHNM
EEEEECCCCCCCCCCCCEECCCHHHEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCC
TNPIQPDMFLYLTECLSDATIHINLPTKKITKKPLYLLYINEGSDIKNKLVTSHYHHHLQ
CCCCCCHHHHHHHHHHCCCEEEEECCHHHHCCCCEEEEEECCCCCHHHHHHHHCCEEEEE
IGNDSNTCVIEHFISINKNGHFSGARMSMTTGNRSKLDHVKLIFENNASYHIAHNDINVG
ECCCCCEEEEEEEEEECCCCCCCCEEEEEECCCCCCCCEEEEEEECCCEEEEEECCCCCC
QSSNVNSSIFVILGPKFISHRTSAQINHSGSSLSLNSLLFLSEQDIGNICTYLEHNNREY
CCCCCCCEEEEEECCHHHCCCCCCEEECCCCCEEEEEEEEEECCCCCHHHHHHCCCCCHH
ASSRQLHKIIACNYSAGVFNGLIKVNPDSIKTDGIMINNNLLLNQDATIHSIPKLEIYSD
HHHHHEEEEEEECCCCHHHCCEEEECCCCCCCCCEEEECCEEECCCCCEECCCEEEEECC
DVKCSHGATIGHIDTNQLFYLSTRGIPKKDALKMLIYAFAIEIIGSIENTILQDLVLKRF
CCEECCCCEEEEECCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NKALARIII
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503; 10322040 [H]