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The map label for this gene is sufC [H]

Identifier: 71892139

GI number: 71892139

Start: 439324

End: 440064

Strand: Direct

Name: sufC [H]

Synonym: BPEN_371

Alternate gene names: 71892139

Gene position: 439324-440064 (Clockwise)

Preceding gene: 71892138

Following gene: 71892140

Centisome position: 55.49

GC content: 31.04

Gene sequence:

>741_bases
ATGCTATTAGTAAAAAATTTGAATGTCAGCGTAAAAAATATATCTATTCTGAAAAAACTAAATTTGGAAATTAATCCCGG
TGAAATACACATCATCATGGGACCTAACGGATCGGGAAAAAGTACATTATCCGCTACATTATCTGGTCAACAAAATTATA
CTGTTACTAATGGAGAAATATTATTTAAAAATAAAAATTTATTACTCCTGAAGCCAGAAGAACGTGCAGGGGAAGGTATT
TTTGTAGCATTTCAGCATCCGGTAGATATTCCAGGAATCAGTAATCAATCATTTTTACACCACGCTGTTAATGCTGTACG
TAAATATAGACACCAACCTCTTATGGATCGGTTTCATTTTATCCAACTCGTTCAAAAAAATATGGCGTTATTAAAAATGC
CTAATGACCTTTTGAATCGATCAGTAAACGTTGGATTTTCTGGAGGAGAAAAAAAACGTAATGATATTCTTCAAATGATG
ATGTTAGAACCATTACTATGTATTCTTGATGAAACAGATTCTGGTTTAGATATTGATGCAATAAAAATTGTTTATAATGG
TCTTAATATATTAAATGATAAAATACGTTCATTTGTGATTATCACGCATTATCAAAGAATTTTAGAGTATATTAAACCGA
ATTATGTTCATGTGCTACATAAAGGTCATATTGTAAAATCTGGTGATATCTCTTTAGTCAAACAGCTTGAGGAAAAAGGC
TATGGTTGGTTGTCTGGATAA

Upstream 100 bases:

>100_bases
CACAAAAATTACTAGAAATTACTTTAGAGCACAGCGTTGGATAAAATTTATAATATAAGTACTTGCAATAATCATAGCAT
TCAAAACAGGAGAAGTCATG

Downstream 100 bases:

>100_bases
CAAAAATCGAGTATTAAACGAATGGTACGGATTATTTAAACAAAAAAATAATATTAATCCAAATTTAGCACACAAATATT
GGGAACGTATTAAAATACTT

Product: Fe-S cluster assembly ABC transporter ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 246; Mature: 246

Protein sequence:

>246_residues
MLLVKNLNVSVKNISILKKLNLEINPGEIHIIMGPNGSGKSTLSATLSGQQNYTVTNGEILFKNKNLLLLKPEERAGEGI
FVAFQHPVDIPGISNQSFLHHAVNAVRKYRHQPLMDRFHFIQLVQKNMALLKMPNDLLNRSVNVGFSGGEKKRNDILQMM
MLEPLLCILDETDSGLDIDAIKIVYNGLNILNDKIRSFVIITHYQRILEYIKPNYVHVLHKGHIVKSGDISLVKQLEEKG
YGWLSG

Sequences:

>Translated_246_residues
MLLVKNLNVSVKNISILKKLNLEINPGEIHIIMGPNGSGKSTLSATLSGQQNYTVTNGEILFKNKNLLLLKPEERAGEGI
FVAFQHPVDIPGISNQSFLHHAVNAVRKYRHQPLMDRFHFIQLVQKNMALLKMPNDLLNRSVNVGFSGGEKKRNDILQMM
MLEPLLCILDETDSGLDIDAIKIVYNGLNILNDKIRSFVIITHYQRILEYIKPNYVHVLHKGHIVKSGDISLVKQLEEKG
YGWLSG
>Mature_246_residues
MLLVKNLNVSVKNISILKKLNLEINPGEIHIIMGPNGSGKSTLSATLSGQQNYTVTNGEILFKNKNLLLLKPEERAGEGI
FVAFQHPVDIPGISNQSFLHHAVNAVRKYRHQPLMDRFHFIQLVQKNMALLKMPNDLLNRSVNVGFSGGEKKRNDILQMM
MLEPLLCILDETDSGLDIDAIKIVYNGLNILNDKIRSFVIITHYQRILEYIKPNYVHVLHKGHIVKSGDISLVKQLEEKG
YGWLSG

Specific function: Has low ATPase activity. The SufBCD complex acts synergistically with SufE to stimulate the cysteine desulfurase activity of SufS. The SufBCD complex contributes to the assembly or repair of oxygen-labile iron-sulfur clusters under oxidative stress. May f

COG id: COG0396

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, ATPase component

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Escherichia coli, GI1787972, Length=245, Percent_Identity=68.5714285714286, Blast_Score=365, Evalue=1e-102,
Organism=Escherichia coli, GI1787500, Length=220, Percent_Identity=29.5454545454545, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1790467, Length=230, Percent_Identity=26.5217391304348, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1789672, Length=234, Percent_Identity=25.2136752136752, Blast_Score=62, Evalue=3e-11,
Organism=Escherichia coli, GI1786698, Length=177, Percent_Identity=25.4237288135593, Blast_Score=61, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI17565938, Length=220, Percent_Identity=27.7272727272727, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI71996809, Length=215, Percent_Identity=25.1162790697674, Blast_Score=68, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI193209708, Length=223, Percent_Identity=26.457399103139, Blast_Score=67, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI25146777, Length=219, Percent_Identity=26.4840182648402, Blast_Score=64, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593
- InterPro:   IPR010230 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 27743; Mature: 27743

Theoretical pI: Translated: 9.79; Mature: 9.79

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLVKNLNVSVKNISILKKLNLEINPGEIHIIMGPNGSGKSTLSATLSGQQNYTVTNGEI
CEEEEECCEEEHHEEEEEEECCEECCCEEEEEECCCCCCCCEEEEEECCCCCEEEECCEE
LFKNKNLLLLKPEERAGEGIFVAFQHPVDIPGISNQSFLHHAVNAVRKYRHQPLMDRFHF
EEECCCEEEECCHHHCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHH
IQLVQKNMALLKMPNDLLNRSVNVGFSGGEKKRNDILQMMMLEPLLCILDETDSGLDIDA
HHHHHHCHHEEECCHHHHCCEEECCCCCCCHHHHHHHHHHHHHHHHEEECCCCCCCCHHH
IKIVYNGLNILNDKIRSFVIITHYQRILEYIKPNYVHVLHKGHIVKSGDISLVKQLEEKG
HHEEHHHHHHHHHHHHHEEEHHHHHHHHHHHCCCEEEEEECCEEEECCCHHHHHHHHHCC
YGWLSG
CCCCCC
>Mature Secondary Structure
MLLVKNLNVSVKNISILKKLNLEINPGEIHIIMGPNGSGKSTLSATLSGQQNYTVTNGEI
CEEEEECCEEEHHEEEEEEECCEECCCEEEEEECCCCCCCCEEEEEECCCCCEEEECCEE
LFKNKNLLLLKPEERAGEGIFVAFQHPVDIPGISNQSFLHHAVNAVRKYRHQPLMDRFHF
EEECCCEEEECCHHHCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHH
IQLVQKNMALLKMPNDLLNRSVNVGFSGGEKKRNDILQMMMLEPLLCILDETDSGLDIDA
HHHHHHCHHEEECCHHHHCCEEECCCCCCCHHHHHHHHHHHHHHHHEEECCCCCCCCHHH
IKIVYNGLNILNDKIRSFVIITHYQRILEYIKPNYVHVLHKGHIVKSGDISLVKQLEEKG
HHEEHHHHHHHHHHHHHEEEHHHHHHHHHHHCCCEEEEEECCEEEECCCHHHHHHHHHCC
YGWLSG
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503; 10322040 [H]