Definition | Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome. |
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Accession | NC_007086 |
Length | 5,148,708 |
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The map label for this gene is gnl [H]
Identifier: 66766892
GI number: 66766892
Start: 663334
End: 664251
Strand: Reverse
Name: gnl [H]
Synonym: XC_0553
Alternate gene names: 66766892
Gene position: 664251-663334 (Counterclockwise)
Preceding gene: 66766893
Following gene: 66766889
Centisome position: 12.9
GC content: 71.35
Gene sequence:
>918_bases ATGGACAGCCATTGCCGCGTCCGCCCGGCCGGCCCGGCCGTTCCCGCCGACTGCGACCCGCCCCGCACCACGCACGCCGC GCTGGCCGCACGGTTGGGCGATGCGCGCCTGCTCACCCTCTACGACCAGGCCACCTGGAGCGAAGGCCCGGCTTGGTGGG AGGCCCAGCGCACGCTGGTGTGGAGCGACCTGGTTGGCCGCCGCGTGCTGGGGTGGCGGGAAGACGGCACCGTAGATGTG CTGCTGGATGCCACCGCCTTCACCAATGGCAACGCGGTGGATGCGCAGCAGCGCCTGGTGCACTGCGAACACGGCCGGCG CGCCATCACCCGCAGCGATGCCGATGGCCAGGCCCACCTGCTGGTGGGCCGTTATGCCGGCAAGCGGCTCAACTCGCCCA ATGACCTGATCGTGGCGCGCGATGGCGCGATCTGGTTCACCGACCCGCCGTTCGGCCTGCGCAAGCCCAGCCAGGGCTGC CCGGCCGATCCGGAGCTCGCCCACCACAGCGTGTACCGGCTGCCGCCGGACGGCAGCCCGCTGCAGCGCATGGCCGACCT GGACCACCCCAACGGGCTGGCGTTCTCGCCCGACGAGCAGACCTTGTACGTCTCGCAGACGCCGGAGCAGGGACACGGCA GCGTGGAAATCACCGCGTTTGCCTGGCGCGATGGCGCGCTGCACGACCGCCGCCACTTCGCCAGCGTCCCGGACGGGCTG CCGGATGGCTTCTGTGTGGATCGCGGCGGCTGGCTGTGGAGCAGCTCCGGCACCGGCGTGTGCGTATTCGACAGCGACGG GCAGCTGCTTGGGCACATCCCCACCCCGGGCACCGCCTCCAACTGCACCTTCGACCAAGCACAGCAGCGGCTGTTCATCA CCGGCGGGCCGTGTCTGTGGATGCTGCCGCTGCCCTGA
Upstream 100 bases:
>100_bases GCCAACTGGGCGACACGCCCTGCCTGCAGATGATGGTGCAGTTTGCGCACTCCCCCGGCGTGGCGGCAGCGCATCCGTTC GATGAAACAGCGGCGCCATG
Downstream 100 bases:
>100_bases GCACGTGCGCAGACGCGCGGCGTAGACTGTTCAGGCAATAAAAAAGCCCGCTTGCAGCGAACTGCCAGCGGGCTTTGCTC CCTCCCCCACGTCGGGATGC
Product: gluconolactonase precursor
Products: NA
Alternate protein names: D-glucono-delta-lactone lactonohydrolase [H]
Number of amino acids: Translated: 305; Mature: 305
Protein sequence:
>305_residues MDSHCRVRPAGPAVPADCDPPRTTHAALAARLGDARLLTLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWREDGTVDV LLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDADGQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGC PADPELAHHSVYRLPPDGSPLQRMADLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGL PDGFCVDRGGWLWSSSGTGVCVFDSDGQLLGHIPTPGTASNCTFDQAQQRLFITGGPCLWMLPLP
Sequences:
>Translated_305_residues MDSHCRVRPAGPAVPADCDPPRTTHAALAARLGDARLLTLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWREDGTVDV LLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDADGQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGC PADPELAHHSVYRLPPDGSPLQRMADLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGL PDGFCVDRGGWLWSSSGTGVCVFDSDGQLLGHIPTPGTASNCTFDQAQQRLFITGGPCLWMLPLP >Mature_305_residues MDSHCRVRPAGPAVPADCDPPRTTHAALAARLGDARLLTLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWREDGTVDV LLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDADGQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGC PADPELAHHSVYRLPPDGSPLQRMADLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGL PDGFCVDRGGWLWSSSGTGVCVFDSDGQLLGHIPTPGTASNCTFDQAQQRLFITGGPCLWMLPLP
Specific function: Hydrolyzes the gluconolactone formed by glucose-fructose oxidoreductase, and that formed in aerobic conditions by the glucose dehydrogenase present [H]
COG id: COG3386
COG function: function code G; Gluconolactonase
Gene ontology:
Cell location: Periplasm (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011042 - InterPro: IPR013658 - InterPro: IPR005511 - InterPro: IPR006311 [H]
Pfam domain/function: PF08450 SGL [H]
EC number: =3.1.1.17 [H]
Molecular weight: Translated: 33222; Mature: 33222
Theoretical pI: Translated: 5.90; Mature: 5.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDSHCRVRPAGPAVPADCDPPRTTHAALAARLGDARLLTLYDQATWSEGPAWWEAQRTLV CCCCCEECCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEECCCCCCCCCEEHHCEEEE WSDLVGRRVLGWREDGTVDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDADGQAHL EHHHHHHHHCCCCCCCCEEEEEEEEECCCCCEECHHHHHEECCCCCEEEECCCCCCCEEE LVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSP EEEECCCCCCCCCCCEEEEECCEEEECCCCCCCCCCCCCCCCCCCHHCCEEEEECCCCCH LQRMADLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGL HHHHHHCCCCCCCEECCCCCEEEEECCCCCCCCCEEEEEEEECCCCCCCHHHHCCCCCCC PDGFCVDRGGWLWSSSGTGVCVFDSDGQLLGHIPTPGTASNCTFDQAQQRLFITGGPCLW CCCEEEECCCEEECCCCCEEEEECCCCCEEEECCCCCCCCCCCHHHHCCEEEEECCCEEE MLPLP EEECC >Mature Secondary Structure MDSHCRVRPAGPAVPADCDPPRTTHAALAARLGDARLLTLYDQATWSEGPAWWEAQRTLV CCCCCEECCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEECCCCCCCCCEEHHCEEEE WSDLVGRRVLGWREDGTVDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDADGQAHL EHHHHHHHHCCCCCCCCEEEEEEEEECCCCCEECHHHHHEECCCCCEEEECCCCCCCEEE LVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSP EEEECCCCCCCCCCCEEEEECCEEEECCCCCCCCCCCCCCCCCCCHHCCEEEEECCCCCH LQRMADLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGL HHHHHHCCCCCCCEECCCCCEEEEECCCCCCCCCEEEEEEEECCCCCCCHHHHCCCCCCC PDGFCVDRGGWLWSSSGTGVCVFDSDGQLLGHIPTPGTASNCTFDQAQQRLFITGGPCLW CCCEEEECCCEEECCCCCEEEEECCCCCEEEECCCCCCCCCCCHHHHCCEEEEECCCEEE MLPLP EEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1482681 [H]