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The map label for this gene is yibP [H]

Identifier: 66766374

GI number: 66766374

Start: 25780

End: 26997

Strand: Reverse

Name: yibP [H]

Synonym: XC_0022

Alternate gene names: 66766374

Gene position: 26997-25780 (Counterclockwise)

Preceding gene: 66766377

Following gene: 66766373

Centisome position: 0.52

GC content: 68.72

Gene sequence:

>1218_bases
GTGTTCGCCTGCACGCTGCTGGCCGGCACCAGCGCCGGGGCGCAGAGCCAGCGCGAGGCCGAGCGCAAGCTGCAGCAATT
GCGCGATGAACTGAAAACCATCAGCGCCGACCGCCGCGACCTGGAAGGCAAGCGCGGCACCGCCGCCCAGCAGCTGCGCC
AGGCCGATGAAAAAGTCGCCAAGACCGCACGTGCGCTGAGCGAGACCGAAACCGCGCTGCGCACGCACGAACAGAAACTC
TCCGAACTGCAGCAGCAGCGCGCGCAGCTGCAGCGTGGCCTGCGCGAGCAACGCGTGCAGTTGGCCGCACTGCTGCGCGC
CGCCGACCATGTGGGCCGCAACGCGCCGCTGAAAGTGCTGTTGTCACAAGACACCGTGGGCAATGCCACGCGCATGCTGG
CCGACCACCGCTACGTGCAGAGCGCACGCGCGCAGCGCATCCAGGGGCTCACCACGCAACTGGAAGCACTGACCCAGGTC
GAGCAGCAAATCACCGAGCGGCGCCAGGCGCTGGACGCCGCACGCGCACAACAAAAAGCACAGGCCTCGTCGCTGCTGAA
AGACCGCTCGCAGCAGGCCGCCACCGTTGCGCAACTGGACACCCGCTATCAACAGCGCGCCGAGCGCGAGAAAGCCCTGG
GCCAGGATGCCAAGGCGCTGGAGCAGTTGCTGGCCAATCTGCGTGCAGCCGCGGCCAAGGCAGAAGCCGAGCGCCGCGCG
GCGGCCAAGCGTGCGGCCGCCGAAGCCGCCGCGCAGGCCAAGCGCGGCAAAACCGATCGCCCGGAACGCCCCGGCAAGAC
ACCGCCCAAGGTCGTGGCCAACGCACCGGCGCCAAAGGTCGGTGGCCTGAGTTGGCCGGTGTCGGGCAACCTGCTGGCGC
GCTTCAACGCCACGCTGCCGGATGGCCATACCAGCAAGGGCGTGCTGATCGGCGCGCCCAAGGGCAGCACGGTCACCGCG
GTGGCCGATGGCACGGTGGTGTTTTCCGACTGGATGACCGGCTACGGCATGATCCTGATCGTGGATCACGGCAACGGCTA
CATGAGCCTGTACGCGCACAACGACACCTTGCTGCGCGATGCGGGCGCCAGCATCAAGCGTGGCGAGGCCGTGGCCAAGG
TCGGCAGTTCGGGCGGGCAGGGTGTGCCGGCGCTGTACTTCGAGCTGCGTCGCAACGGCCAGCCAGTGGATCCTTCGAGC
TGGCTGCAGCGCCGCTGA

Upstream 100 bases:

>100_bases
ACCTGCCTGAAGTCACTGGAACTTTCGTTTGCCTCCTGCCGCCGCGCCATTGCCGCACCCGACCCGCAGCCCGCCCGCAC
GCGCATGGCTGGCCGCGGCC

Downstream 100 bases:

>100_bases
GTGCATGGGGCGCCGCACTTATCCGGCGTCTGCTTGCTGCATGGTGTTGCCGCTCACATGCCGGCAGTTCGCGGCGCCAG
AGTGTCGCTGCGGACTGTCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 405; Mature: 405

Protein sequence:

>405_residues
MFACTLLAGTSAGAQSQREAERKLQQLRDELKTISADRRDLEGKRGTAAQQLRQADEKVAKTARALSETETALRTHEQKL
SELQQQRAQLQRGLREQRVQLAALLRAADHVGRNAPLKVLLSQDTVGNATRMLADHRYVQSARAQRIQGLTTQLEALTQV
EQQITERRQALDAARAQQKAQASSLLKDRSQQAATVAQLDTRYQQRAEREKALGQDAKALEQLLANLRAAAAKAEAERRA
AAKRAAAEAAAQAKRGKTDRPERPGKTPPKVVANAPAPKVGGLSWPVSGNLLARFNATLPDGHTSKGVLIGAPKGSTVTA
VADGTVVFSDWMTGYGMILIVDHGNGYMSLYAHNDTLLRDAGASIKRGEAVAKVGSSGGQGVPALYFELRRNGQPVDPSS
WLQRR

Sequences:

>Translated_405_residues
MFACTLLAGTSAGAQSQREAERKLQQLRDELKTISADRRDLEGKRGTAAQQLRQADEKVAKTARALSETETALRTHEQKL
SELQQQRAQLQRGLREQRVQLAALLRAADHVGRNAPLKVLLSQDTVGNATRMLADHRYVQSARAQRIQGLTTQLEALTQV
EQQITERRQALDAARAQQKAQASSLLKDRSQQAATVAQLDTRYQQRAEREKALGQDAKALEQLLANLRAAAAKAEAERRA
AAKRAAAEAAAQAKRGKTDRPERPGKTPPKVVANAPAPKVGGLSWPVSGNLLARFNATLPDGHTSKGVLIGAPKGSTVTA
VADGTVVFSDWMTGYGMILIVDHGNGYMSLYAHNDTLLRDAGASIKRGEAVAKVGSSGGQGVPALYFELRRNGQPVDPSS
WLQRR
>Mature_405_residues
MFACTLLAGTSAGAQSQREAERKLQQLRDELKTISADRRDLEGKRGTAAQQLRQADEKVAKTARALSETETALRTHEQKL
SELQQQRAQLQRGLREQRVQLAALLRAADHVGRNAPLKVLLSQDTVGNATRMLADHRYVQSARAQRIQGLTTQLEALTQV
EQQITERRQALDAARAQQKAQASSLLKDRSQQAATVAQLDTRYQQRAEREKALGQDAKALEQLLANLRAAAAKAEAERRA
AAKRAAAEAAAQAKRGKTDRPERPGKTPPKVVANAPAPKVGGLSWPVSGNLLARFNATLPDGHTSKGVLIGAPKGSTVTA
VADGTVVFSDWMTGYGMILIVDHGNGYMSLYAHNDTLLRDAGASIKRGEAVAKVGSSGGQGVPALYFELRRNGQPVDPSS
WLQRR

Specific function: Unknown

COG id: COG4942

COG function: function code D; Membrane-bound metallopeptidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0756 [H]

Homologues:

Organism=Escherichia coli, GI87082297, Length=421, Percent_Identity=33.4916864608076, Blast_Score=179, Evalue=4e-46,
Organism=Escherichia coli, GI1789099, Length=122, Percent_Identity=37.7049180327869, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI87082174, Length=139, Percent_Identity=33.8129496402878, Blast_Score=81, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF01551 Peptidase_M23 [H]

EC number: NA

Molecular weight: Translated: 43833; Mature: 43833

Theoretical pI: Translated: 10.94; Mature: 10.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFACTLLAGTSAGAQSQREAERKLQQLRDELKTISADRRDLEGKRGTAAQQLRQADEKVA
CEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
KTARALSETETALRTHEQKLSELQQQRAQLQRGLREQRVQLAALLRAADHVGRNAPLKVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE
LSQDTVGNATRMLADHRYVQSARAQRIQGLTTQLEALTQVEQQITERRQALDAARAQQKA
EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QASSLLKDRSQQAATVAQLDTRYQQRAEREKALGQDAKALEQLLANLRAAAAKAEAERRA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
AAKRAAAEAAAQAKRGKTDRPERPGKTPPKVVANAPAPKVGGLSWPVSGNLLARFNATLP
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCEEEEEECCCC
DGHTSKGVLIGAPKGSTVTAVADGTVVFSDWMTGYGMILIVDHGNGYMSLYAHNDTLLRD
CCCCCCCEEEECCCCCEEEEEECCCEEEECHHHCCCEEEEEECCCCEEEEEECCCHHHHH
AGASIKRGEAVAKVGSSGGQGVPALYFELRRNGQPVDPSSWLQRR
CCCCCHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCHHHHHCCC
>Mature Secondary Structure
MFACTLLAGTSAGAQSQREAERKLQQLRDELKTISADRRDLEGKRGTAAQQLRQADEKVA
CEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
KTARALSETETALRTHEQKLSELQQQRAQLQRGLREQRVQLAALLRAADHVGRNAPLKVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE
LSQDTVGNATRMLADHRYVQSARAQRIQGLTTQLEALTQVEQQITERRQALDAARAQQKA
EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QASSLLKDRSQQAATVAQLDTRYQQRAEREKALGQDAKALEQLLANLRAAAAKAEAERRA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
AAKRAAAEAAAQAKRGKTDRPERPGKTPPKVVANAPAPKVGGLSWPVSGNLLARFNATLP
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCEEEEEECCCC
DGHTSKGVLIGAPKGSTVTAVADGTVVFSDWMTGYGMILIVDHGNGYMSLYAHNDTLLRD
CCCCCCCEEEECCCCCEEEEEECCCEEEECHHHCCCEEEEEECCCCEEEEEECCCHHHHH
AGASIKRGEAVAKVGSSGGQGVPALYFELRRNGQPVDPSSWLQRR
CCCCCHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]