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The map label for this gene is ctpA [H]

Identifier: 66766373

GI number: 66766373

Start: 24035

End: 25615

Strand: Reverse

Name: ctpA [H]

Synonym: XC_0021

Alternate gene names: 66766373

Gene position: 25615-24035 (Counterclockwise)

Preceding gene: 66766374

Following gene: 66766369

Centisome position: 0.5

GC content: 67.87

Gene sequence:

>1581_bases
TTGACGGCGATTCAACGCGGATTTACCGCTGCTTCGCGCATAATCCAGCCAGCGCCGCGCTGTGGGGCGTCTTCTCTCTT
TTCGGAGTGCTTCATGCGCGTAGCCGTCCTGTCCGTTGCCCTGTCGCTGGCCCTGTTCGCGTCGCCCGGTTGGGCACAGC
AGGCCAGCCCCGCTGCCGCACCGGCCACCGCGGACGACCCGGAAGCCAACGAAGCCGCCGTCTCCAAGGTGCCGCTGGAC
GAGATCCGCCGCTTCGTGGCCGTGTACAACGCGGTCAAGCAGGCCTACGTGGACCCGGTCGAGGACAAGAAGCTGATGCA
CGCGGCCGTGCGCGGCCTGCTGTCGGACCTGGATCCGCACAGCACCTACTTCGACAAGGAAGACGCCGAGGCCTTCGACG
AACAGGCCACCGGCGCCTATGACGGTATCGGCGTGGAACTGCTGCAGCAGCAGGACAACACGCTCAAGGTGATTGCGCCG
ATCGACGACACGCCGGCTGCACGCGCCGGTGTCAAGGCGGGCGATGTGATCGTGGCCATCGACGGCAAACCGATCGACGC
CAGCAAGGCAATGGAGCCGCTGCGCGGCGAGTCCGGCAGCAAGGTCACGCTGACCATCGTGCGTGACAAGGTCGCCAAAC
CGTTCGACATCACCCTGCAGCGCGAAACCATTCGCGTGGCCAGCGTGCGCAGCAAGCTGCTCGAACCCGGCTATGGCTAC
ATCCGCATCAGCACCTTCCAGGCCGACACCGGCGCCGACTTCCAGAAGAACCTCAAGCAACTGCAGGCCGGCGGCAAGCT
GCGTGGCCTGGTGCTGGACCTGCGCAGCAACCCGGGCGGCCTGCTGACCTCGGCCGTGCAGGTTGCCGACGATCTGCTCG
ACAAGGGCAACATCGTCAGCACGCGCGGGCGCATCTCCATCAGCGACGCCAAGTTCGACGCAACCCCGGGCGATTTGCTC
GGCGGTGCGCCGGTGGTGGTGCTGGTGGACGCCGGCTCGGCGAGCGCGTCGGAAGTGTTGGCTGGCGCGCTGCGCGACAA
CCAGCGCGCGCGCATCATCGGCAGCCGCACCTTCGGCAAGGGCTCGGTGCAGACCGTGTTGCCGCTGGACAACGGCGACT
CGGTCAAGCTCACCACCGCGCGCTATTACACGCCCAGTGGCAAGTCGATCCAGGCCAGCGGCATCGTGCCCGAAGTGATG
CTCACCCCCGAACCGCAGCCCGGCGACGCCGACGTGCCGGCCAGCCTCACCGACTTCAGCGAGGCAACCCTACCGGGCCA
CCTGCGCGGCGATGCAGAAGGTGAGGAGGGCTACAGCGCCGGCGACGTGCTGCCGGGCGATGGCCCGATCAACGAGGCGC
TGGCCGAACTCAAGCAACCTGGTTCTGTTGCCAAGGCCCAGGCCGCGCGCAAGGCCAAGGCGCAAGCGCAAAAGCCCAAG
GCCATCAAGCCAACGCCCGAGCCCAAGCCCGCCGCACCACGCCCGCCCGCCAGCGAGCAGACCACGCCGTCCGAGCCGAC
GGACAAGGCCAAGCCGGCGGCGCCAGCACCGGCAGCTGTGCCGGCCGAACCGGTCAAGTAA

Upstream 100 bases:

>100_bases
CAGTTCGCGGCGCCAGAGTGTCGCTGCGGACTGTCCCGACGGCAGCACCGCAGCAGATCTCATCGCGCAGCCTTGCCGGT
GCTTCGCACATACGCCGGCG

Downstream 100 bases:

>100_bases
CGGGCAGTGCTGCGGGTGCCACGTGCACCCGCAGTGCGCAGCTGGTGCTGGTGTGCATGCGGGCATGAGTGCGTCGGACA
CGGCTCGTAGTGCATCGTGC

Product: carboxyl-terminal protease

Products: NA

Alternate protein names: C-terminal-processing protease [H]

Number of amino acids: Translated: 526; Mature: 525

Protein sequence:

>526_residues
MTAIQRGFTAASRIIQPAPRCGASSLFSECFMRVAVLSVALSLALFASPGWAQQASPAAAPATADDPEANEAAVSKVPLD
EIRRFVAVYNAVKQAYVDPVEDKKLMHAAVRGLLSDLDPHSTYFDKEDAEAFDEQATGAYDGIGVELLQQQDNTLKVIAP
IDDTPAARAGVKAGDVIVAIDGKPIDASKAMEPLRGESGSKVTLTIVRDKVAKPFDITLQRETIRVASVRSKLLEPGYGY
IRISTFQADTGADFQKNLKQLQAGGKLRGLVLDLRSNPGGLLTSAVQVADDLLDKGNIVSTRGRISISDAKFDATPGDLL
GGAPVVVLVDAGSASASEVLAGALRDNQRARIIGSRTFGKGSVQTVLPLDNGDSVKLTTARYYTPSGKSIQASGIVPEVM
LTPEPQPGDADVPASLTDFSEATLPGHLRGDAEGEEGYSAGDVLPGDGPINEALAELKQPGSVAKAQAARKAKAQAQKPK
AIKPTPEPKPAAPRPPASEQTTPSEPTDKAKPAAPAPAAVPAEPVK

Sequences:

>Translated_526_residues
MTAIQRGFTAASRIIQPAPRCGASSLFSECFMRVAVLSVALSLALFASPGWAQQASPAAAPATADDPEANEAAVSKVPLD
EIRRFVAVYNAVKQAYVDPVEDKKLMHAAVRGLLSDLDPHSTYFDKEDAEAFDEQATGAYDGIGVELLQQQDNTLKVIAP
IDDTPAARAGVKAGDVIVAIDGKPIDASKAMEPLRGESGSKVTLTIVRDKVAKPFDITLQRETIRVASVRSKLLEPGYGY
IRISTFQADTGADFQKNLKQLQAGGKLRGLVLDLRSNPGGLLTSAVQVADDLLDKGNIVSTRGRISISDAKFDATPGDLL
GGAPVVVLVDAGSASASEVLAGALRDNQRARIIGSRTFGKGSVQTVLPLDNGDSVKLTTARYYTPSGKSIQASGIVPEVM
LTPEPQPGDADVPASLTDFSEATLPGHLRGDAEGEEGYSAGDVLPGDGPINEALAELKQPGSVAKAQAARKAKAQAQKPK
AIKPTPEPKPAAPRPPASEQTTPSEPTDKAKPAAPAPAAVPAEPVK
>Mature_525_residues
TAIQRGFTAASRIIQPAPRCGASSLFSECFMRVAVLSVALSLALFASPGWAQQASPAAAPATADDPEANEAAVSKVPLDE
IRRFVAVYNAVKQAYVDPVEDKKLMHAAVRGLLSDLDPHSTYFDKEDAEAFDEQATGAYDGIGVELLQQQDNTLKVIAPI
DDTPAARAGVKAGDVIVAIDGKPIDASKAMEPLRGESGSKVTLTIVRDKVAKPFDITLQRETIRVASVRSKLLEPGYGYI
RISTFQADTGADFQKNLKQLQAGGKLRGLVLDLRSNPGGLLTSAVQVADDLLDKGNIVSTRGRISISDAKFDATPGDLLG
GAPVVVLVDAGSASASEVLAGALRDNQRARIIGSRTFGKGSVQTVLPLDNGDSVKLTTARYYTPSGKSIQASGIVPEVML
TPEPQPGDADVPASLTDFSEATLPGHLRGDAEGEEGYSAGDVLPGDGPINEALAELKQPGSVAKAQAARKAKAQAQKPKA
IKPTPEPKPAAPRPPASEQTTPSEPTDKAKPAAPAPAAVPAEPVK

Specific function: Involved in protection of the bacterium from thermal and osmotic stresses (Potential) [H]

COG id: COG0793

COG function: function code M; Periplasmic protease

Gene ontology:

Cell location: Secreted (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain [H]

Homologues:

Organism=Escherichia coli, GI1788134, Length=388, Percent_Identity=28.6082474226804, Blast_Score=119, Evalue=5e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR005151
- InterPro:   IPR004447 [H]

Pfam domain/function: PF00595 PDZ; PF03572 Peptidase_S41 [H]

EC number: =3.4.21.102 [H]

Molecular weight: Translated: 54854; Mature: 54723

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAIQRGFTAASRIIQPAPRCGASSLFSECFMRVAVLSVALSLALFASPGWAQQASPAAA
CCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PATADDPEANEAAVSKVPLDEIRRFVAVYNAVKQAYVDPVEDKKLMHAAVRGLLSDLDPH
CCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCC
STYFDKEDAEAFDEQATGAYDGIGVELLQQQDNTLKVIAPIDDTPAARAGVKAGDVIVAI
CCCCCCHHHHHHHHHCCCCCCCCCHHHHHCCCCEEEEEECCCCCCHHHCCCCCCCEEEEE
DGKPIDASKAMEPLRGESGSKVTLTIVRDKVAKPFDITLQRETIRVASVRSKLLEPGYGY
CCCCCCHHHHHHHHCCCCCCEEEEEEEECCCCCCEEEEEEHHHHHHHHHHHHHHCCCCCE
IRISTFQADTGADFQKNLKQLQAGGKLRGLVLDLRSNPGGLLTSAVQVADDLLDKGNIVS
EEEEEEECCCCCHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEE
TRGRISISDAKFDATPGDLLGGAPVVVLVDAGSASASEVLAGALRDNQRARIIGSRTFGK
CCCEEEECCCCCCCCCHHHCCCCCEEEEEECCCCCHHHHHHHHHCCCCCEEEEECCCCCC
GSVQTVLPLDNGDSVKLTTARYYTPSGKSIQASGIVPEVMLTPEPQPGDADVPASLTDFS
CCCEEEEECCCCCEEEEEEEEEECCCCCCEEECCCCCEEEECCCCCCCCCCCCCCHHCCC
EATLPGHLRGDAEGEEGYSAGDVLPGDGPINEALAELKQPGSVAKAQAARKAKAQAQKPK
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC
AIKPTPEPKPAAPRPPASEQTTPSEPTDKAKPAAPAPAAVPAEPVK
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TAIQRGFTAASRIIQPAPRCGASSLFSECFMRVAVLSVALSLALFASPGWAQQASPAAA
CCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PATADDPEANEAAVSKVPLDEIRRFVAVYNAVKQAYVDPVEDKKLMHAAVRGLLSDLDPH
CCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCC
STYFDKEDAEAFDEQATGAYDGIGVELLQQQDNTLKVIAPIDDTPAARAGVKAGDVIVAI
CCCCCCHHHHHHHHHCCCCCCCCCHHHHHCCCCEEEEEECCCCCCHHHCCCCCCCEEEEE
DGKPIDASKAMEPLRGESGSKVTLTIVRDKVAKPFDITLQRETIRVASVRSKLLEPGYGY
CCCCCCHHHHHHHHCCCCCCEEEEEEEECCCCCCEEEEEEHHHHHHHHHHHHHHCCCCCE
IRISTFQADTGADFQKNLKQLQAGGKLRGLVLDLRSNPGGLLTSAVQVADDLLDKGNIVS
EEEEEEECCCCCHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEE
TRGRISISDAKFDATPGDLLGGAPVVVLVDAGSASASEVLAGALRDNQRARIIGSRTFGK
CCCEEEECCCCCCCCCHHHCCCCCEEEEEECCCCCHHHHHHHHHCCCCCEEEEECCCCCC
GSVQTVLPLDNGDSVKLTTARYYTPSGKSIQASGIVPEVMLTPEPQPGDADVPASLTDFS
CCCEEEEECCCCCEEEEEEEEEECCCCCCEEECCCCCEEEECCCCCCCCCCCCCCHHCCC
EATLPGHLRGDAEGEEGYSAGDVLPGDGPINEALAELKQPGSVAKAQAARKAKAQAQKPK
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC
AIKPTPEPKPAAPRPPASEQTTPSEPTDKAKPAAPAPAAVPAEPVK
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9141685 [H]