Definition | Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome. |
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Accession | NC_007086 |
Length | 5,148,708 |
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The map label for this gene is 66766377
Identifier: 66766377
GI number: 66766377
Start: 30028
End: 30459
Strand: Reverse
Name: 66766377
Synonym: XC_0025
Alternate gene names: NA
Gene position: 30459-30028 (Counterclockwise)
Preceding gene: 66766378
Following gene: 66766374
Centisome position: 0.59
GC content: 62.04
Gene sequence:
>432_bases ATGACCATCGCGCTGGTTGGCGCACTTGCCCTCACCGCACACGGTGCGTTTGCGCAGGACGCCGCCAAGCCGGCAAAGGC ACTCACTTCCGCCGAAGTCAGCAGCATGTTGACGGCCAAGGGCTACACGAAGGTGCACGACATCAAGTTCGAGCACGGCG TGTGGACGGCCGATGCGCGCAGCGGCGACGGCAAGGATGTGGATGTGCGGATCGACCCGACGACCGGCCGCGTGTATGGC GACCAGACTACCTCCAAGATGAGCGAGGCCGACATTCGTGCAGCGCTCTCCACCAAGGGCTATTCCAAGGTGCATGACCT CAAGTTCGAAGATGGCCTGTGGAAGGCCGATGCCGAACAAAGCGGTGGGCAGAAGGTAGACCTGCACGTCGACCCGGAAG ATGGGCACGTGGTGAGCGTGGATAACGATTGA
Upstream 100 bases:
>100_bases TTGCAATACATAAGGTCGTTTTTTTCACCACGCCGCGATCTGCCCACGCCCAGCATGGACGCACTTCACTGCTAGGAGCA CTCTCATGGCACAGCGTTTG
Downstream 100 bases:
>100_bases TTGCTCCCGCCTAACGCTTGCGCGCAGCGGCCGCGCGGGATGTGCGTTGCGATTTAGAGCAGCTATCAAAACTAGTGCGC AGCCGCCAGGCGGGCGCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 143; Mature: 142
Protein sequence:
>143_residues MTIALVGALALTAHGAFAQDAAKPAKALTSAEVSSMLTAKGYTKVHDIKFEHGVWTADARSGDGKDVDVRIDPTTGRVYG DQTTSKMSEADIRAALSTKGYSKVHDLKFEDGLWKADAEQSGGQKVDLHVDPEDGHVVSVDND
Sequences:
>Translated_143_residues MTIALVGALALTAHGAFAQDAAKPAKALTSAEVSSMLTAKGYTKVHDIKFEHGVWTADARSGDGKDVDVRIDPTTGRVYG DQTTSKMSEADIRAALSTKGYSKVHDLKFEDGLWKADAEQSGGQKVDLHVDPEDGHVVSVDND >Mature_142_residues TIALVGALALTAHGAFAQDAAKPAKALTSAEVSSMLTAKGYTKVHDIKFEHGVWTADARSGDGKDVDVRIDPTTGRVYGD QTTSKMSEADIRAALSTKGYSKVHDLKFEDGLWKADAEQSGGQKVDLHVDPEDGHVVSVDND
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15185; Mature: 15054
Theoretical pI: Translated: 5.20; Mature: 5.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIALVGALALTAHGAFAQDAAKPAKALTSAEVSSMLTAKGYTKVHDIKFEHGVWTADAR CEEEEEEHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCEEECCCC SGDGKDVDVRIDPTTGRVYGDQTTSKMSEADIRAALSTKGYSKVHDLKFEDGLWKADAEQ CCCCCEEEEEECCCCCEEECCCCHHHHHHHHHHHHHCCCCCCCEECCCCCCCCEECCCCC SGGQKVDLHVDPEDGHVVSVDND CCCCEEEEEECCCCCEEEEECCC >Mature Secondary Structure TIALVGALALTAHGAFAQDAAKPAKALTSAEVSSMLTAKGYTKVHDIKFEHGVWTADAR EEEEEEHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCEEECCCC SGDGKDVDVRIDPTTGRVYGDQTTSKMSEADIRAALSTKGYSKVHDLKFEDGLWKADAEQ CCCCCEEEEEECCCCCEEECCCCHHHHHHHHHHHHHCCCCCCCEECCCCCCCCEECCCCC SGGQKVDLHVDPEDGHVVSVDND CCCCEEEEEECCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA