Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
---|---|
Accession | NC_007005 |
Length | 6,093,698 |
Click here to switch to the map view.
The map label for this gene is 66045948
Identifier: 66045948
GI number: 66045948
Start: 3294315
End: 3294998
Strand: Reverse
Name: 66045948
Synonym: Psyr_2712
Alternate gene names: NA
Gene position: 3294998-3294315 (Counterclockwise)
Preceding gene: 66045949
Following gene: 66045947
Centisome position: 54.07
GC content: 58.77
Gene sequence:
>684_bases ATGAGAATGTTCAATCTGTTGACGTTTGCTGCCGTGTTCAGCACCAGCATTGTGTTCACTGCCCCCGTCAATGCTGCCGT CTCCCCGGTCTCCGAACAGTCCTGCCATTTCATGCCCGTCGTCGACAGCGCTGCGGGCCTGCAACACACTCAGTCGGTGG GCGTGCTGTACAGCGAAAACACCCTCAGCAACCTTCAGTATTTGAACAACTATCACTCGGTGGCGCTGAGGAGTGGCCGC AGTGGCGCGCTCGATTCGCGTATCCGCAATGCATTCGTCAACAGTTCGGACCCGGCACTGGCGACCGACTGGCTGGTGGG CTCATTAAAGAAAGAGTTCGCCTCGGTGACCGTCTACGACACGCTCGATGCGCTGATGCAGGCGCGGCCGGATGTGGTGG TCATGCTCGACACTTACAATCGTCTGGTGAGCAAGCGCAACAGTCAGGTCGAAGCGCGGTTCATGGCACGCTTCTATGAC AACGACCTGCAATACATCGGCAAGGCTGAAGGTGAGGTGGTTCGGGAAATGACCTCGGTCTGGGTGCAAGGCAAGGCCGC TCCGGAGATCGCCGCACAGATCGATCAGCAGCGTGATCTGCAAGTGAATGCCTTGAAGCAGTTCGACGCCTCGCTCAAAG CCCTGGTCATGCAGGCCGACCGGGCGCAAGTGGCGGCGAACTGA
Upstream 100 bases:
>100_bases TCATTCAGTCGATAGTCATCATCAAGCAAGGCAAGTTCTGTTTTTCCGGCAAAGGAGGAGGATGGCGCCATAGCCACCTG CTCCAAAGGGAGACGACGCG
Downstream 100 bases:
>100_bases TTGTAGTGACTGCGTCAGGCCTGTGAGGCTGTTGACCGATAGAAACTGCTCATCGACTTTCGCTGCTTCAATACCGCCTG CCATCAGCATGGTCGCCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 227; Mature: 227
Protein sequence:
>227_residues MRMFNLLTFAAVFSTSIVFTAPVNAAVSPVSEQSCHFMPVVDSAAGLQHTQSVGVLYSENTLSNLQYLNNYHSVALRSGR SGALDSRIRNAFVNSSDPALATDWLVGSLKKEFASVTVYDTLDALMQARPDVVVMLDTYNRLVSKRNSQVEARFMARFYD NDLQYIGKAEGEVVREMTSVWVQGKAAPEIAAQIDQQRDLQVNALKQFDASLKALVMQADRAQVAAN
Sequences:
>Translated_227_residues MRMFNLLTFAAVFSTSIVFTAPVNAAVSPVSEQSCHFMPVVDSAAGLQHTQSVGVLYSENTLSNLQYLNNYHSVALRSGR SGALDSRIRNAFVNSSDPALATDWLVGSLKKEFASVTVYDTLDALMQARPDVVVMLDTYNRLVSKRNSQVEARFMARFYD NDLQYIGKAEGEVVREMTSVWVQGKAAPEIAAQIDQQRDLQVNALKQFDASLKALVMQADRAQVAAN >Mature_227_residues MRMFNLLTFAAVFSTSIVFTAPVNAAVSPVSEQSCHFMPVVDSAAGLQHTQSVGVLYSENTLSNLQYLNNYHSVALRSGR SGALDSRIRNAFVNSSDPALATDWLVGSLKKEFASVTVYDTLDALMQARPDVVVMLDTYNRLVSKRNSQVEARFMARFYD NDLQYIGKAEGEVVREMTSVWVQGKAAPEIAAQIDQQRDLQVNALKQFDASLKALVMQADRAQVAAN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25006; Mature: 25006
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRMFNLLTFAAVFSTSIVFTAPVNAAVSPVSEQSCHFMPVVDSAAGLQHTQSVGVLYSEN CCHHHHHHHHHHHHHHEEEEECCCHHCCCCCCCCCCEEEECCCCCCCHHHHHCEEEEECC TLSNLQYLNNYHSVALRSGRSGALDSRIRNAFVNSSDPALATDWLVGSLKKEFASVTVYD HHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH TLDALMQARPDVVVMLDTYNRLVSKRNSQVEARFMARFYDNDLQYIGKAEGEVVREMTSV HHHHHHHCCCCEEEEEHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHH WVQGKAAPEIAAQIDQQRDLQVNALKQFDASLKALVMQADRAQVAAN HHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRMFNLLTFAAVFSTSIVFTAPVNAAVSPVSEQSCHFMPVVDSAAGLQHTQSVGVLYSEN CCHHHHHHHHHHHHHHEEEEECCCHHCCCCCCCCCCEEEECCCCCCCHHHHHCEEEEECC TLSNLQYLNNYHSVALRSGRSGALDSRIRNAFVNSSDPALATDWLVGSLKKEFASVTVYD HHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH TLDALMQARPDVVVMLDTYNRLVSKRNSQVEARFMARFYDNDLQYIGKAEGEVVREMTSV HHHHHHHCCCCEEEEEHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHH WVQGKAAPEIAAQIDQQRDLQVNALKQFDASLKALVMQADRAQVAAN HHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA