| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is tas [H]
Identifier: 66045536
GI number: 66045536
Start: 2668183
End: 2669220
Strand: Direct
Name: tas [H]
Synonym: Psyr_2296
Alternate gene names: 66045536
Gene position: 2668183-2669220 (Clockwise)
Preceding gene: 66045535
Following gene: 66045537
Centisome position: 43.79
GC content: 59.34
Gene sequence:
>1038_bases ATGCAATTTCGTAAATTGGGCAAAACCGATCTGTCGGTCAGCGCGATCTGTCTGGGCACCATGACCTGGGGCGAGCAGAA CACCCAGGATGAAGCATTCGAACAGATTCGTATGGCCAAGGATGCCAAGGTCAACTTCCTCGACACGGCAGAAATGTACC CGGTGCCGCCGCGTGGCGAGACCTACACCAAGACCGAAAGCATCATCGGCGAGTACTTCAAGAAGTACGGCGACCGCAAC GACTGGGTATTGGCCAGCAAGGTCGCCGGTCCAGGTCGCATGGATCACATCCGCGATGGCAATCCCCGCCTTGACCGCAA GAACATCACTGCGGCGCTGGAAGCCAGCCTCAAGCGTCTGAACACCGATTATCTGGACCTGTACCAGCTGCACTGGCCGG ATCGCAAGACCAACTTCTTCGGCGTGCTCGGTTACACCCACGACCCGGATGATCAGGCCGTCGAAATCGAAGAAACCCTG TCGGTACTGGGCGATCTGGTCAAGGCGGGCAAGATTCGCCACTTCGGTCTGTCCAATGAAACGCCATGGGGCACCCAGCG TTTTCTGCACCTGGCCGAAACCCTCGATCTGCCACGTGCCGTTTCCATCCAGAACCCCTACAACCTGCTTAACCGCACGT TTGAAGTCGGTCTGGCGGAAATTGCCATTCGCGAACAGATCGGCCTGCTGGCTTACTCGCCGCTGGCGTTCGGTGTGCTG GCGGGCAAGTACCTGGACGGTGCACGTCCGGCCGATGGCCGTCTGACCCTGTTCGAGCGTTTCCAGCGCTACAACAATCC GCAGGCCGTCACCGCCACGGCCAGGTACGTCGCGCTGGCTCGCGAGCATGGTCTGGATCCCTCGCAGATGGCGCTGGCCT ACGTGACCAGCCGACCGTTCGTGACCAGCAACATCATTGGTGCCACGAAACTCGATCAGCTGAAGATCAATCTGCAGAGC ATCGACGTCACGCTGTCCGATGAGGTCATCGCCGGTATCGAGGCCATTCACACCTCGCAGCCCAACCCTGCGCCATAA
Upstream 100 bases:
>100_bases TAGGTAAAACCGGATAAAAAGTGTTGCAGTGAATGACCAGTCGGCGTTTTATGGGAGCCCTGTTTCAAGCTGTATCTTTT TGAATCAAACGGAGACATCG
Downstream 100 bases:
>100_bases CCTGCACTGAACTTAATTTCAGCCTCGCCAGTCAGCACTAGTACGCTTACTCCGAGGCTGAAATTGATGCACATCTCACT CAAGCAACAAGTTGCAATCG
Product: aldo/keto reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 345; Mature: 345
Protein sequence:
>345_residues MQFRKLGKTDLSVSAICLGTMTWGEQNTQDEAFEQIRMAKDAKVNFLDTAEMYPVPPRGETYTKTESIIGEYFKKYGDRN DWVLASKVAGPGRMDHIRDGNPRLDRKNITAALEASLKRLNTDYLDLYQLHWPDRKTNFFGVLGYTHDPDDQAVEIEETL SVLGDLVKAGKIRHFGLSNETPWGTQRFLHLAETLDLPRAVSIQNPYNLLNRTFEVGLAEIAIREQIGLLAYSPLAFGVL AGKYLDGARPADGRLTLFERFQRYNNPQAVTATARYVALAREHGLDPSQMALAYVTSRPFVTSNIIGATKLDQLKINLQS IDVTLSDEVIAGIEAIHTSQPNPAP
Sequences:
>Translated_345_residues MQFRKLGKTDLSVSAICLGTMTWGEQNTQDEAFEQIRMAKDAKVNFLDTAEMYPVPPRGETYTKTESIIGEYFKKYGDRN DWVLASKVAGPGRMDHIRDGNPRLDRKNITAALEASLKRLNTDYLDLYQLHWPDRKTNFFGVLGYTHDPDDQAVEIEETL SVLGDLVKAGKIRHFGLSNETPWGTQRFLHLAETLDLPRAVSIQNPYNLLNRTFEVGLAEIAIREQIGLLAYSPLAFGVL AGKYLDGARPADGRLTLFERFQRYNNPQAVTATARYVALAREHGLDPSQMALAYVTSRPFVTSNIIGATKLDQLKINLQS IDVTLSDEVIAGIEAIHTSQPNPAP >Mature_345_residues MQFRKLGKTDLSVSAICLGTMTWGEQNTQDEAFEQIRMAKDAKVNFLDTAEMYPVPPRGETYTKTESIIGEYFKKYGDRN DWVLASKVAGPGRMDHIRDGNPRLDRKNITAALEASLKRLNTDYLDLYQLHWPDRKTNFFGVLGYTHDPDDQAVEIEETL SVLGDLVKAGKIRHFGLSNETPWGTQRFLHLAETLDLPRAVSIQNPYNLLNRTFEVGLAEIAIREQIGLLAYSPLAFGVL AGKYLDGARPADGRLTLFERFQRYNNPQAVTATARYVALAREHGLDPSQMALAYVTSRPFVTSNIIGATKLDQLKINLQS IDVTLSDEVIAGIEAIHTSQPNPAP
Specific function: Unknown
COG id: COG0667
COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldo/keto reductase 2 family [H]
Homologues:
Organism=Homo sapiens, GI27436969, Length=351, Percent_Identity=28.4900284900285, Blast_Score=119, Evalue=3e-27, Organism=Homo sapiens, GI4504825, Length=349, Percent_Identity=28.3667621776504, Blast_Score=118, Evalue=7e-27, Organism=Homo sapiens, GI27436964, Length=354, Percent_Identity=27.4011299435028, Blast_Score=110, Evalue=3e-24, Organism=Homo sapiens, GI27436962, Length=354, Percent_Identity=27.4011299435028, Blast_Score=109, Evalue=3e-24, Organism=Homo sapiens, GI27436966, Length=354, Percent_Identity=27.4011299435028, Blast_Score=107, Evalue=2e-23, Organism=Homo sapiens, GI27436971, Length=356, Percent_Identity=25.561797752809, Blast_Score=98, Evalue=9e-21, Organism=Homo sapiens, GI41327764, Length=247, Percent_Identity=28.3400809716599, Blast_Score=67, Evalue=3e-11, Organism=Escherichia coli, GI1789199, Length=347, Percent_Identity=53.8904899135447, Blast_Score=373, Evalue=1e-104, Organism=Escherichia coli, GI87081735, Length=352, Percent_Identity=30.6818181818182, Blast_Score=145, Evalue=3e-36, Organism=Escherichia coli, GI1789375, Length=342, Percent_Identity=29.8245614035088, Blast_Score=120, Evalue=2e-28, Organism=Escherichia coli, GI1788070, Length=340, Percent_Identity=26.4705882352941, Blast_Score=93, Evalue=2e-20, Organism=Escherichia coli, GI1788081, Length=344, Percent_Identity=27.6162790697674, Blast_Score=80, Evalue=1e-16, Organism=Saccharomyces cerevisiae, GI6323998, Length=353, Percent_Identity=24.3626062322946, Blast_Score=86, Evalue=9e-18, Organism=Saccharomyces cerevisiae, GI6319958, Length=313, Percent_Identity=23.6421725239617, Blast_Score=86, Evalue=1e-17, Organism=Saccharomyces cerevisiae, GI6325169, Length=259, Percent_Identity=28.5714285714286, Blast_Score=83, Evalue=6e-17, Organism=Saccharomyces cerevisiae, GI6322615, Length=234, Percent_Identity=23.5042735042735, Blast_Score=74, Evalue=5e-14, Organism=Saccharomyces cerevisiae, GI6319951, Length=339, Percent_Identity=21.8289085545723, Blast_Score=67, Evalue=3e-12, Organism=Drosophila melanogaster, GI24646155, Length=332, Percent_Identity=26.8072289156627, Blast_Score=69, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR020471 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: NA
Molecular weight: Translated: 38572; Mature: 38572
Theoretical pI: Translated: 6.18; Mature: 6.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQFRKLGKTDLSVSAICLGTMTWGEQNTQDEAFEQIRMAKDAKVNFLDTAEMYPVPPRGE CCCHHCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCC TYTKTESIIGEYFKKYGDRNDWVLASKVAGPGRMDHIRDGNPRLDRKNITAALEASLKRL CCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH NTDYLDLYQLHWPDRKTNFFGVLGYTHDPDDQAVEIEETLSVLGDLVKAGKIRHFGLSNE CCCHHEEEEEECCCCCCCEEEEECCCCCCCCCEEEHHHHHHHHHHHHHHCCEEEECCCCC TPWGTQRFLHLAETLDLPRAVSIQNPYNLLNRTFEVGLAEIAIREQIGLLAYSPLAFGVL CCCHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHCCEEECHHHHHHH AGKYLDGARPADGRLTLFERFQRYNNPQAVTATARYVALAREHGLDPSQMALAYVTSRPF HHHHCCCCCCCCCCHHHHHHHHHHCCCCEEEHHHHHHHHHHHHCCCHHHHHHHHHHCCCC VTSNIIGATKLDQLKINLQSIDVTLSDEVIAGIEAIHTSQPNPAP EECCCCCCCCHHHEEEEEEEEEEEECHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MQFRKLGKTDLSVSAICLGTMTWGEQNTQDEAFEQIRMAKDAKVNFLDTAEMYPVPPRGE CCCHHCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCC TYTKTESIIGEYFKKYGDRNDWVLASKVAGPGRMDHIRDGNPRLDRKNITAALEASLKRL CCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH NTDYLDLYQLHWPDRKTNFFGVLGYTHDPDDQAVEIEETLSVLGDLVKAGKIRHFGLSNE CCCHHEEEEEECCCCCCCEEEEECCCCCCCCCEEEHHHHHHHHHHHHHHCCEEEECCCCC TPWGTQRFLHLAETLDLPRAVSIQNPYNLLNRTFEVGLAEIAIREQIGLLAYSPLAFGVL CCCHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHCCEEECHHHHHHH AGKYLDGARPADGRLTLFERFQRYNNPQAVTATARYVALAREHGLDPSQMALAYVTSRPF HHHHCCCCCCCCCCHHHHHHHHHHCCCCEEEHHHHHHHHHHHHCCCHHHHHHHHHHCCCC VTSNIIGATKLDQLKINLQSIDVTLSDEVIAGIEAIHTSQPNPAP EECCCCCCCCHHHEEEEEEEEEEEECHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9560382; 9278503 [H]