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The map label for this gene is exbD [H]

Identifier: 66045529

GI number: 66045529

Start: 2659017

End: 2659418

Strand: Direct

Name: exbD [H]

Synonym: Psyr_2289

Alternate gene names: 66045529

Gene position: 2659017-2659418 (Clockwise)

Preceding gene: 66045528

Following gene: 66045530

Centisome position: 43.64

GC content: 57.96

Gene sequence:

>402_bases
ATGGCTTTTTCCACGCAAGACACCGATGAAGTGCTGAGCGAGATCAACGTCACGCCGCTGGTAGACGTGATGCTGGTGCT
GCTGGTGGTGTTCATCGTTACCGCGCCGCTATTGACAAACTCGATCCCGATCAACCTGCCCAAGACCGAATCGGTCGCGC
CAGTGGAGCAGAAAGACCCATTGGTGGTGAGCATCGACGGGCAGGGCAAGCTGTTCATCAACAAGGACGAAATCCAGCCG
GACTTGCTGGAAAGCAACCTGAAGGCGGCCAGGGACAAGGCCCCTGACGTGCGCGTGCAATTGCAGGCGGACAATGGCGT
CAACTACGGGGAAGTCGCGCGCGCCATGGCCTCCATCGAACGTGCCGGGATTACCAAATTGTCGGTAATCACTGCCAGGT
AA

Upstream 100 bases:

>100_bases
CTGGCGCAGAAGAGTGCCTTCCGTGTGCTGCTGCATCCGGTATTGAAGTCCGGCGCTGCAGGCGCACACGCCGGGCAGAA
AGTGCAGGAGGCCTCCTGAG

Downstream 100 bases:

>100_bases
AAGATTCATACCACCTACAGTTTCAACAGTTTCGGGCCGCATCCTCAGGCAGGTGCGGCCTTTTTTTGTCTGCATCGCAG
GCATTTTTCAGTACTGACAC

Product: biopolymer transport protein ExbD/TolR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 133; Mature: 132

Protein sequence:

>133_residues
MAFSTQDTDEVLSEINVTPLVDVMLVLLVVFIVTAPLLTNSIPINLPKTESVAPVEQKDPLVVSIDGQGKLFINKDEIQP
DLLESNLKAARDKAPDVRVQLQADNGVNYGEVARAMASIERAGITKLSVITAR

Sequences:

>Translated_133_residues
MAFSTQDTDEVLSEINVTPLVDVMLVLLVVFIVTAPLLTNSIPINLPKTESVAPVEQKDPLVVSIDGQGKLFINKDEIQP
DLLESNLKAARDKAPDVRVQLQADNGVNYGEVARAMASIERAGITKLSVITAR
>Mature_132_residues
AFSTQDTDEVLSEINVTPLVDVMLVLLVVFIVTAPLLTNSIPINLPKTESVAPVEQKDPLVVSIDGQGKLFINKDEIQPD
LLESNLKAARDKAPDVRVQLQADNGVNYGEVARAMASIERAGITKLSVITAR

Specific function: Involved in the tonB-dependent energy-dependent transport of various receptor-bound substrates [H]

COG id: COG0848

COG function: function code U; Biopolymer transport protein

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the exbD/tolR family [H]

Homologues:

Organism=Escherichia coli, GI1789380, Length=119, Percent_Identity=31.9327731092437, Blast_Score=79, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003400 [H]

Pfam domain/function: PF02472 ExbD [H]

EC number: NA

Molecular weight: Translated: 14381; Mature: 14250

Theoretical pI: Translated: 4.31; Mature: 4.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFSTQDTDEVLSEINVTPLVDVMLVLLVVFIVTAPLLTNSIPINLPKTESVAPVEQKDP
CCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
LVVSIDGQGKLFINKDEIQPDLLESNLKAARDKAPDVRVQLQADNGVNYGEVARAMASIE
EEEEECCCCEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHH
RAGITKLSVITAR
HCCCCEEEEEECC
>Mature Secondary Structure 
AFSTQDTDEVLSEINVTPLVDVMLVLLVVFIVTAPLLTNSIPINLPKTESVAPVEQKDP
CCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
LVVSIDGQGKLFINKDEIQPDLLESNLKAARDKAPDVRVQLQADNGVNYGEVARAMASIE
EEEEECCCCEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHH
RAGITKLSVITAR
HCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10689178; 10984043 [H]