| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
Click here to switch to the map view.
The map label for this gene is pcaG [H]
Identifier: 66045363
GI number: 66045363
Start: 2480694
End: 2481296
Strand: Direct
Name: pcaG [H]
Synonym: Psyr_2123
Alternate gene names: 66045363
Gene position: 2480694-2481296 (Clockwise)
Preceding gene: 66045362
Following gene: 66045364
Centisome position: 40.71
GC content: 61.86
Gene sequence:
>603_bases ATGCCCGTTCAATTGCTGCAGGAAACCCCTTCGCAAACCGCCGGCCCCTACGTCCACATCGGTCTCGCACCGCAGGTGGC CGGCAACCCGACCCGCGAGCTGGAAATCTGGAACGAGATGGCCAGGCCCGAGGCGCCCGGCGAGCACATCGTGTTGCTGG GCAACGTCTTCGACGGCAACGGCCATCTGATCCGCGATGCCTACCTGGAATTCTGGCAGGCGGATCATCAGGGCGCGTAT CACAGCGAATTCCACCCGGACAGACCGTTCAACGGCTTTGGTCGCACGGCAACCGCGGACGATGGCCAGTGGATCCTGAA GACCATCAAGCCAGGCTCTGCGCGCAATGCGGCGGGTGTGCCGATGGCGGCGCACATCAATGTTTCGCTGTTTGCGCGTG GCATCAATATTCATCTGCAGACGCGGTTGTATTTCGACGACGAAGCCCAGGCGAATGCGCAGGACCCGGTGCTCAATCTG ATCGAGCAGCCCCCGCGTCGCGAAACCCTGGTGGCGCGCCGCTGCACGTACGAGGGGCAGACGGCCTATCGTTTTGATAT CCGTGTGCAGGGTGAAGGCGAGACAGTGTTCTTCGATTTCTGA
Upstream 100 bases:
>100_bases TGGGCATGGGCAATCCAATGGATTGCCTGGCGTATCGCTTTGATATCGTGTTGCGCGGCCAGCGCAAGACTCACTTCGAA AACTGCTGAGGAGGCCCGAC
Downstream 100 bases:
>100_bases ATCGCTTGTCGATTCCGAAATCAATGTGCGTGCGATTCAAGGCGCCTGCATCGGCAGGCGACCCTATAAAAATAAAAGGA CACCTCCATGACGCTTTCCG
Product: protocatechuate 3,4-dioxygenase
Products: NA
Alternate protein names: 3,4-PCD [H]
Number of amino acids: Translated: 200; Mature: 199
Protein sequence:
>200_residues MPVQLLQETPSQTAGPYVHIGLAPQVAGNPTRELEIWNEMARPEAPGEHIVLLGNVFDGNGHLIRDAYLEFWQADHQGAY HSEFHPDRPFNGFGRTATADDGQWILKTIKPGSARNAAGVPMAAHINVSLFARGINIHLQTRLYFDDEAQANAQDPVLNL IEQPPRRETLVARRCTYEGQTAYRFDIRVQGEGETVFFDF
Sequences:
>Translated_200_residues MPVQLLQETPSQTAGPYVHIGLAPQVAGNPTRELEIWNEMARPEAPGEHIVLLGNVFDGNGHLIRDAYLEFWQADHQGAY HSEFHPDRPFNGFGRTATADDGQWILKTIKPGSARNAAGVPMAAHINVSLFARGINIHLQTRLYFDDEAQANAQDPVLNL IEQPPRRETLVARRCTYEGQTAYRFDIRVQGEGETVFFDF >Mature_199_residues PVQLLQETPSQTAGPYVHIGLAPQVAGNPTRELEIWNEMARPEAPGEHIVLLGNVFDGNGHLIRDAYLEFWQADHQGAYH SEFHPDRPFNGFGRTATADDGQWILKTIKPGSARNAAGVPMAAHINVSLFARGINIHLQTRLYFDDEAQANAQDPVLNLI EQPPRRETLVARRCTYEGQTAYRFDIRVQGEGETVFFDF
Specific function: Plays an essential role in the utilization of numerous aromatic and hydroaromatic compounds via the beta-ketoadipate pathway [H]
COG id: COG3485
COG function: function code Q; Protocatechuate 3,4-dioxygenase beta subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the intradiol ring-cleavage dioxygenase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000627 - InterPro: IPR015889 - InterPro: IPR012786 [H]
Pfam domain/function: PF00775 Dioxygenase_C [H]
EC number: =1.13.11.3 [H]
Molecular weight: Translated: 22407; Mature: 22276
Theoretical pI: Translated: 5.25; Mature: 5.25
Prosite motif: PS00083 INTRADIOL_DIOXYGENAS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVQLLQETPSQTAGPYVHIGLAPQVAGNPTRELEIWNEMARPEAPGEHIVLLGNVFDGN CCCCHHHCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEEEEEECCC GHLIRDAYLEFWQADHQGAYHSEFHPDRPFNGFGRTATADDGQWILKTIKPGSARNAAGV CCEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCC PMAAHINVSLFARGINIHLQTRLYFDDEAQANAQDPVLNLIEQPPRRETLVARRCTYEGQ CEEEEEEEEEEEEEEEEEEEEEEEECCCCCCCCCCHHHHHHCCCCCHHHHHHHHCCCCCC TAYRFDIRVQGEGETVFFDF EEEEEEEEEECCCCEEEEEC >Mature Secondary Structure PVQLLQETPSQTAGPYVHIGLAPQVAGNPTRELEIWNEMARPEAPGEHIVLLGNVFDGN CCCHHHCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEEEEEECCC GHLIRDAYLEFWQADHQGAYHSEFHPDRPFNGFGRTATADDGQWILKTIKPGSARNAAGV CCEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCC PMAAHINVSLFARGINIHLQTRLYFDDEAQANAQDPVLNLIEQPPRRETLVARRCTYEGQ CEEEEEEEEEEEEEEEEEEEEEEEECCCCCCCCCCHHHHHHCCCCCHHHHHHHHCCCCCC TAYRFDIRVQGEGETVFFDF EEEEEEEEEECCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8407791; 465136; 3194022; 7990141; 9254599; 9254600; 9298971 [H]