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The map label for this gene is lsc [H]

Identifier: 66045343

GI number: 66045343

Start: 2454620

End: 2455867

Strand: Direct

Name: lsc [H]

Synonym: Psyr_2103

Alternate gene names: 66045343

Gene position: 2454620-2455867 (Clockwise)

Preceding gene: 66045337

Following gene: 66045346

Centisome position: 40.28

GC content: 57.29

Gene sequence:

>1248_bases
ATGAGTAACATCAATTACGTCCCTACCGTCTGGTCCCGTGCCGATGCGTTGAAGGTCAATGAAAATGACCCGACCACCAC
GCAGCCGCTGGTAAAACCGGACTTCCCGGTCATGAGTGATAAGGTCTTCATCTGGGACACCATGCCGTTGCGCGAGCTTG
ACGGCACGGTGGTCTCAGTCAACGGCTGGTCGGTCATCGTCACGCTGACAGCTGATCGCCACCCCGACGACCCGCAGTAT
CTCGGCGCCAACGGCCGCTACGACATCAAGCGCGACTGGGAAGATCGTCACGGGCGGGCGCGCATGTGCTACTGGTATTC
GCGTACCGGCAAGAACTGGATCTTCGGTGGCCGGGTCATGGCCGAAGGCGTGTCGCCCACCACCCGCGAGTGGGCGGGCA
CACCGGTACTGTTGAATGACAAGGGTGATATCGATCTGTACTACACCTGCGTGACACCGGGGGCGACGATTGCCAAAGTA
CGCGGCCGTATCGTGACCTCCGATCAGGGCGTGGAGTTGAAAGACTTTACCCAGGTCAAGAAACTGTTCGAGGCCGATGG
CACTTATTATCAAACCGAAGCGCAGAACTCGACATGGAACTTCCGCGACCCGAGTCCGTTTATTGATCCCAATGATGGCA
AGTTGTATATGGTCTTTGAAGGTAATGTTGCCGGCGAACGCGGTACGCATACCGTTGGTGCTGCAGAACTTGGCCCGGTG
CCAACCGGCCATGAAGAAGTTGGGGGTGCGCGTTTTCAAGTGGGCTGTATCGGTCTGGCGGTTGCTAAAGATCTCAGCGG
TGAAGAATGGGAAATATTACCGCCACTGGTGACTGCGGTGGGTGTCAATGATCAGACCGAACGTCCGCATTATGTCTTTC
AGGACGGTAAGTATTATTTGTTCACCATTAGTCACAAGTTTACGTATGCCGACGGTGTGACCGGGCCGGATGGCGTTTAC
GGTTTTGTGGGCGAGCATTTGTTCGGGCCTTACCGGCCGATGAACGCATCCGGACTGGTGCTGGGCAATCCGCCTGCACA
GCCTTTCCAGACGTACTCCCACTGCGTGATGCCGAACGGTCTGGTGACATCGTTCATCGACAGCGTGCCCACCACCGGCG
ATGACTACCGTATCGGCGGCACCGAGGCGCCGACGGTCAGGATCCTGTTGAAAGGCGACCGCTCGTTCGTGCAGGAAGAG
TATGACTACGGCTACGTGCCGGCGATGAAGGATGTGCAACTGAGCTGA

Upstream 100 bases:

>100_bases
ATGCCCGACACACTCTGCACCTCGGCATTGCACCCATGCCTGCCGTGTTGTCTTCCTATACGCGCTGCTTGTACAGGCGC
CTGCAAAGGACATCATCATC

Downstream 100 bases:

>100_bases
CAGGCTGCGCCCCTGTAACCTGTGAAGAACGCCTGTACGGACAGGCGTTCTTCGTGGCTTCAGCCCAGCAGTTCGCTCAT
CGCGATAATCTGCTCGGCCA

Product: levansucrase

Products: NA

Alternate protein names: Beta-D-fructofuranosyl transferase; Sucrose 6-fructosyl transferase [H]

Number of amino acids: Translated: 415; Mature: 414

Protein sequence:

>415_residues
MSNINYVPTVWSRADALKVNENDPTTTQPLVKPDFPVMSDKVFIWDTMPLRELDGTVVSVNGWSVIVTLTADRHPDDPQY
LGANGRYDIKRDWEDRHGRARMCYWYSRTGKNWIFGGRVMAEGVSPTTREWAGTPVLLNDKGDIDLYYTCVTPGATIAKV
RGRIVTSDQGVELKDFTQVKKLFEADGTYYQTEAQNSTWNFRDPSPFIDPNDGKLYMVFEGNVAGERGTHTVGAAELGPV
PTGHEEVGGARFQVGCIGLAVAKDLSGEEWEILPPLVTAVGVNDQTERPHYVFQDGKYYLFTISHKFTYADGVTGPDGVY
GFVGEHLFGPYRPMNASGLVLGNPPAQPFQTYSHCVMPNGLVTSFIDSVPTTGDDYRIGGTEAPTVRILLKGDRSFVQEE
YDYGYVPAMKDVQLS

Sequences:

>Translated_415_residues
MSNINYVPTVWSRADALKVNENDPTTTQPLVKPDFPVMSDKVFIWDTMPLRELDGTVVSVNGWSVIVTLTADRHPDDPQY
LGANGRYDIKRDWEDRHGRARMCYWYSRTGKNWIFGGRVMAEGVSPTTREWAGTPVLLNDKGDIDLYYTCVTPGATIAKV
RGRIVTSDQGVELKDFTQVKKLFEADGTYYQTEAQNSTWNFRDPSPFIDPNDGKLYMVFEGNVAGERGTHTVGAAELGPV
PTGHEEVGGARFQVGCIGLAVAKDLSGEEWEILPPLVTAVGVNDQTERPHYVFQDGKYYLFTISHKFTYADGVTGPDGVY
GFVGEHLFGPYRPMNASGLVLGNPPAQPFQTYSHCVMPNGLVTSFIDSVPTTGDDYRIGGTEAPTVRILLKGDRSFVQEE
YDYGYVPAMKDVQLS
>Mature_414_residues
SNINYVPTVWSRADALKVNENDPTTTQPLVKPDFPVMSDKVFIWDTMPLRELDGTVVSVNGWSVIVTLTADRHPDDPQYL
GANGRYDIKRDWEDRHGRARMCYWYSRTGKNWIFGGRVMAEGVSPTTREWAGTPVLLNDKGDIDLYYTCVTPGATIAKVR
GRIVTSDQGVELKDFTQVKKLFEADGTYYQTEAQNSTWNFRDPSPFIDPNDGKLYMVFEGNVAGERGTHTVGAAELGPVP
TGHEEVGGARFQVGCIGLAVAKDLSGEEWEILPPLVTAVGVNDQTERPHYVFQDGKYYLFTISHKFTYADGVTGPDGVYG
FVGEHLFGPYRPMNASGLVLGNPPAQPFQTYSHCVMPNGLVTSFIDSVPTTGDDYRIGGTEAPTVRILLKGDRSFVQEEY
DYGYVPAMKDVQLS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 68 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003469 [H]

Pfam domain/function: PF02435 Glyco_hydro_68 [H]

EC number: =2.4.1.10 [H]

Molecular weight: Translated: 46030; Mature: 45899

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNINYVPTVWSRADALKVNENDPTTTQPLVKPDFPVMSDKVFIWDTMPLRELDGTVVSV
CCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHCCCCEEEE
NGWSVIVTLTADRHPDDPQYLGANGRYDIKRDWEDRHGRARMCYWYSRTGKNWIFGGRVM
CCCEEEEEEEECCCCCCCCEECCCCEECCCCCCCCCCCCEEEEEEEECCCCCEEECCEEE
AEGVSPTTREWAGTPVLLNDKGDIDLYYTCVTPGATIAKVRGRIVTSDQGVELKDFTQVK
ECCCCCCCHHHCCCCEEECCCCCEEEEEEEECCCCEEEECCCEEEECCCCCCHHHHHHHH
KLFEADGTYYQTEAQNSTWNFRDPSPFIDPNDGKLYMVFEGNVAGERGTHTVGAAELGPV
HHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEECCHHCCCC
PTGHEEVGGARFQVGCIGLAVAKDLSGEEWEILPPLVTAVGVNDQTERPHYVFQDGKYYL
CCCHHHHCCCEEEEEEEEEEEECCCCCCCEEECCCEEEEECCCCCCCCCCEEEECCCEEE
FTISHKFTYADGVTGPDGVYGFVGEHLFGPYRPMNASGLVLGNPPAQPFQTYSHCVMPNG
EEEEEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCEEEECCCCCCHHHHHHHHCCCCC
LVTSFIDSVPTTGDDYRIGGTEAPTVRILLKGDRSFVQEEYDYGYVPAMKDVQLS
HHHHHHHHCCCCCCCEEECCCCCCEEEEEEECCHHHHHHHCCCCCCCCCCCEECC
>Mature Secondary Structure 
SNINYVPTVWSRADALKVNENDPTTTQPLVKPDFPVMSDKVFIWDTMPLRELDGTVVSV
CCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHCCCCEEEE
NGWSVIVTLTADRHPDDPQYLGANGRYDIKRDWEDRHGRARMCYWYSRTGKNWIFGGRVM
CCCEEEEEEEECCCCCCCCEECCCCEECCCCCCCCCCCCEEEEEEEECCCCCEEECCEEE
AEGVSPTTREWAGTPVLLNDKGDIDLYYTCVTPGATIAKVRGRIVTSDQGVELKDFTQVK
ECCCCCCCHHHCCCCEEECCCCCEEEEEEEECCCCEEEECCCEEEECCCCCCHHHHHHHH
KLFEADGTYYQTEAQNSTWNFRDPSPFIDPNDGKLYMVFEGNVAGERGTHTVGAAELGPV
HHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEECCHHCCCC
PTGHEEVGGARFQVGCIGLAVAKDLSGEEWEILPPLVTAVGVNDQTERPHYVFQDGKYYL
CCCHHHHCCCEEEEEEEEEEEECCCCCCCEEECCCEEEEECCCCCCCCCCEEEECCCEEE
FTISHKFTYADGVTGPDGVYGFVGEHLFGPYRPMNASGLVLGNPPAQPFQTYSHCVMPNG
EEEEEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCEEEECCCCCCHHHHHHHHCCCCC
LVTSFIDSVPTTGDDYRIGGTEAPTVRILLKGDRSFVQEEYDYGYVPAMKDVQLS
HHHHHHHHCCCCCCCEEECCCCCCEEEEEEECCHHHHHHHCCCCCCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9726857 [H]